BAC Information

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BAC

Clone NameB6Ng01-034K17
Chromosome2 (Build37)
Map Location 75,829,812 - 75,934,036
singlet/doubletdoublet
Overlap genePde11a
Upstream geneA330043C09Rik, LOC667739, LOC545423, LOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1
Downstream geneCyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034K17.bB6Ng01-034K17.g
ACCDH863355DH863356
length718400
definitionDH863355|Mus musculus domesticus DNA, BAC clone: B6Ng01-034K17, 5' end.DH863356|Mus musculus domesticus DNA, BAC clone: B6Ng01-034K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,933,323 - 75,934,036)(75,829,812 - 75,830,216)
sequence
gaattcattatggcacactataaacactccatagtcattacaggactttc
tacttcattctcttatatccttaatgaagaatcctcattgttgagtagaa
tacaaaatgagtttaggaaattattatcttttctggccttatcttctttg
ttcctctttatttaaggagaaagaatgtgttttcaacaccagtaaaactc
cagaaagactcagacactggaatgaactcagagctaccatctatatcata
ctgttctttcagggcctggaattcccaggttcctactcaacatatcctgg
gaaaataacaccaataactacatcatcaggctctccagcaccttgtagtt
taatggttgatgatgggctgtcaccaattacagaaaagtcttgggtggtt
cactacaccagtcttgtcatcatgtgaggaagagctgtgcttaaagtcag
tctgtagatgtgggtttctaggatggcgtgaggatgcagccgacttacct
accaccaccaatgccatagtcaagaaggaagagtagttgggaccaaagca
aatctgcctcagctaaaatgctaggccttctttaagatgaccgcagggtt
gtggtttttgtttgttgtttgtttgtttgtttttgttttttatagtaatg
gaaaagtcattagcacacccaggccatttttaaccactttttttcttttg
catgtgtatgcatttgtc
ccaagacaagtggaaggactggttttcctccgaaagcaaaatgtgggtgg
ccatgctcaacacacagactgacatggagtgatgtagctctgaatgccgt
ggatgggtccctgccgagtgttcctctgggtgtgtgtgggagaggacagg
tcttcatgggagcctgctgacaggactctgttcctctcccgcagacctgt
ccctgtatctggttggcttggctgcaagccctcttaactttcccagcagt
cctaactttgcactttaaaaaccttagagtccttctaactcaaacatctg
tttccactctagtaacatgtatgggaacagataatgatgtgaaggggtca
gggcgtggaagagagggctggagaggccctgggagatgggaggaggggat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_75933323_75934036
seq2: B6Ng01-034K17.b_43_760 (reverse)

seq1  GACAAATGCATACACATGCAAAAAGAAAAAATGTGGTTAAAAATGG-CTG  49
      ||||||||||||||||||| ||||||||||| |||||||||||||| |||
seq2  GACAAATGCATACACATGC-AAAAGAAAAAAAGTGGTTAAAAATGGCCTG  49

seq1  GGTGTGCTAATGAC-TTTCCATTACTATAAAAA--CAAAACAAACAAACA  96
      |||||||||||||| ||||||||||||||||||   ||||||||||||||
seq2  GGTGTGCTAATGACTTTTCCATTACTATAAAAAACAAAAACAAACAAACA  99

seq1  AACAACAAAC-AAAACCACAACCCTGCGGTCATCTTAAAGAAGGCCTAGC  145
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAACAAAAACCACAACCCTGCGGTCATCTTAAAGAAGGCCTAGC  149

seq1  ATTTTAGCTGAGGCAGATTTGCTTTGGTCCCAACTACTCTTCCTTCTTGA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGCTGAGGCAGATTTGCTTTGGTCCCAACTACTCTTCCTTCTTGA  199

seq1  CTATGGCATTGGTGGTGGTAGGTAAGTCGGCTGCATCCTCACGCCATCCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCATTGGTGGTGGTAGGTAAGTCGGCTGCATCCTCACGCCATCCT  249

seq1  AGAAACCCACATCTACAGACTGACTTTAAGCACAGCTCTTCCTCACATGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCACATCTACAGACTGACTTTAAGCACAGCTCTTCCTCACATGA  299

seq1  TGACAAGACTGGTGTAGTGAACCACCCAAGACTTTTCTGTAATTGGTGAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGACTGGTGTAGTGAACCACCCAAGACTTTTCTGTAATTGGTGAC  349

seq1  AGCCCATCATCAACCATTAAACTACAAGGTGCTGGAGAGCCTGATGATGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATCATCAACCATTAAACTACAAGGTGCTGGAGAGCCTGATGATGT  399

seq1  AGTTATTGGTGTTATTTTCCCAGGATATGTTGAGTAGGAACCTGGGAATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTGGTGTTATTTTCCCAGGATATGTTGAGTAGGAACCTGGGAATT  449

seq1  CCAGGCCCTGAAAGAACAGTATGATATAGATGGTAGCTCTGAGTTCATTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCCTGAAAGAACAGTATGATATAGATGGTAGCTCTGAGTTCATTC  499

seq1  CAGTGTCTGAGTCTTTCTGGAGTTTTACTGGTGTTGAAAACACATTCTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGAGTCTTTCTGGAGTTTTACTGGTGTTGAAAACACATTCTTT  549

seq1  CTCCTTAAATAAAGAGGAACAAAGAAGATAAGGCCAGAAAAGATAATAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAAATAAAGAGGAACAAAGAAGATAAGGCCAGAAAAGATAATAAT  599

seq1  TTCCTAAACTCATTTTGTATTCTACTCAACAATGAGGATTCTTCATTAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAACTCATTTTGTATTCTACTCAACAATGAGGATTCTTCATTAAG  649

seq1  GATATAAGAGAATGAAGTAGAAAGTCCTGTAATGACTATTGAGTGTTTAT  695
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATATAAGAGAATGAAGTAGAAAGTCCTGTAATGACTATGGAGTGTTTAT  699

seq1  AGTGTGCCATAATGAATTC  714
      |||||||||||||||||||
seq2  AGTGTGCCATAATGAATTC  718

seq1: chr2_75829812_75830216
seq2: B6Ng01-034K17.g_69_473

seq1  GAATTCCCAAGACAAGTGGAAGGACTGGTTTTCCTCCGAAAGCAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGACAAGTGGAAGGACTGGTTTTCCTCCGAAAGCAAAATGT  50

seq1  GGGTGGCCATGCTCAACACACAGACTGACATGGAGTGATGTAGCTCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCCATGCTCAACACACAGACTGACATGGAGTGATGTAGCTCTGAA  100

seq1  TGCCGTGGATGGGTCCCTGCCGAGTGTTCCTCTGGGTGTGTGTGGGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTGGATGGGTCCCTGCCGAGTGTTCCTCTGGGTGTGTGTGGGAGAG  150

seq1  GACAGGTCTTCATGGGAGCCTGCTGACAGGACTCTGTTCCTCTCCCGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTCTTCATGGGAGCCTGCTGACAGGACTCTGTTCCTCTCCCGCAG  200

seq1  ACCTGTCCCTGTATCTGGTTGGCTTGGCTGCAAGCCCTCTTAACTTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCCCTGTATCTGGTTGGCTTGGCTGCAAGCCCTCTTAACTTTCCC  250

seq1  AGCAGTCCTAACTTTGCACTTTAAAAACCTTAGAGTCCTTCTAACTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCCTAACTTTGCACTTTAAAAACCTTAGAGTCCTTCTAACTCAAA  300

seq1  CATCTGTTTCCACTCTAGTAACATGTATGGGAACAGATAATGATGTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTTCCACTCTAGTAACATGTATGGGAACAGATAATGATGTGAAG  350

seq1  GGGTCAGGGCGTGGAAGAGAGGGCTGGAGAGGCCCGGGGAGATGGGAGGA  400
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGTCAGGGCGTGGAAGAGAGGGCTGGAGAGGCCCTGGGAGATGGGAGGA  400

seq1  GGGGA  405
      |||||
seq2  GGGGA  405