BAC Information

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BAC

Clone NameB6Ng01-034M10
Chromosome2 (Build37)
Map Location 108,423,989 - 108,425,075
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790
Downstream geneLOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034M10.g
ACCDH863431
length1,068
definitionDH863431|Mus musculus domesticus DNA, BAC clone: B6Ng01-034M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatggaaactttacttaaaagccaaattagagcacagagtttctc
tacattttatctatggctgctcaaatagaatgaactgccaatgatactga
ggagtccaaacatatcctaaggcctgctcattagatgcaggataatctat
cagtagcctcatgttgtttttctctctggcaattctactactaaaccaga
ggctaattgtgtaccatgcatgcaatagatcctttctccatcaatgctat
aaattcactccctacctcaatatgtaattgcaaaaacagatgtattggga
aaaccataacaacaataatctggaataaattaggcataggtttaaaatat
tcatttatgtgagtttaaatataaattttcctttttgaaagttttttaaa
tagctacattcaaaaaatacctacacctaaggaaaaaaaaatgagttaat
aaaagctgaaggtcaagaaagttctttggcatttaagagtagtcaatagt
attcattttcttcctgcttcaatgaaggctggagacatactcagttttcc
tattgttagagctgttaataggctgtcactccccaaattccaagtaccta
ctccaattacagtttgtagggaaacactattatggttcagtgacattccc
cagataataagaggaggctctgctactggtgtaggatctacccaggtttg
cacttcccaggccacctgagaattcagtgaaaattaaggaacagggcagg
atgtgagagctgggtgttttgagtataattctgtctgctacatcttcagt
gacttcaaagttacacaccccatagcaagcttctagctctgtaggatttt
attgttaagactatgtgtgccattactctgtgatactccagaacttacat
aaattagacatttatggctatcctggtgtcatcaattcatactaaaatga
gaccttcaggttattttgttccagagtctcttgaggtatttacatttgga
tttaattctattcttaataatttttgttgatggaccattaaatattaact
acactgctcacattgagt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108423989_108425075
seq2: B6Ng01-034M10.g_68_1135 (reverse)

seq1  ACTCAAATGTTTGAGCATGTTGTAGTGTAATATTTTAATTGTCCAATCAA  50
      ||||||   | ||||||   |||||| ||||| |||||| |||| |||||
seq2  ACTCAA---TGTGAGCA--GTGTAGT-TAATA-TTTAATGGTCC-ATCAA  42

seq1  CAAAATATTTATATAAGAATAAGAATTTAAAATCCAAATGTAAAATTACT  100
      ||||  | |||| ||||||| ||||||  |||||||||||| ||||  ||
seq2  CAAA--AATTAT-TAAGAAT-AGAATT--AAATCCAAATGT-AAATACCT  85

seq1  CAAAGGAGACTCTTGAAACAAAATAACCTGAAGGTCTCATTTTAAGTATG  150
      |||  ||||||| || ||||||||||||||||||||||||||| ||||||
seq2  CAA--GAGACTC-TGGAACAAAATAACCTGAAGGTCTCATTTT-AGTATG  131

seq1  AATTGATGACACCAGGATAGCCATAAATGTCTAATTTATGTAAGTTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGACACCAGGATAGCCATAAATGTCTAATTTATGTAAGTTCTGG  181

seq1  AGTATCACAGAGTAATGGCACACATAGTCTTAACAATAAAATCCTACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCACAGAGTAATGGCACACATAGTCTTAACAATAAAATCCTACAGA  231

seq1  GCTAGAAGCTTGCTATGGGGTGTGTAACTTTGAAGTCACTGAAGATGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAGCTTGCTATGGGGTGTGTAACTTTGAAGTCACTGAAGATGTAG  281

seq1  CAGACAGAATTATACTCAAAACACCCAGCTCTCACATCCTGCCCTGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAATTATACTCAAAACACCCAGCTCTCACATCCTGCCCTGTTCC  331

seq1  TTAATTTTCACTGAATTCTCAGGTGGCCTGGGAAGTGCAAACCTGGGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCACTGAATTCTCAGGTGGCCTGGGAAGTGCAAACCTGGGTAG  381

seq1  ATCCTACACCAGTAGCAGAGCCTCCTCTTATTATCTGGGGAATGTCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACACCAGTAGCAGAGCCTCCTCTTATTATCTGGGGAATGTCACTG  431

seq1  AACCATAATAGTGTTTCCCTACAAACTGTAATTGGAGTAGGTACTTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAATAGTGTTTCCCTACAAACTGTAATTGGAGTAGGTACTTGGAA  481

seq1  TTTGGGGAGTGACAGCCTATTAACAGCTCTAACAATAGGAAAACTGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGAGTGACAGCCTATTAACAGCTCTAACAATAGGAAAACTGAGTA  531

seq1  TGTCTCCAGCCTTCATTGAAGCAGGAAGAAAATGAATACTATTGACTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAGCCTTCATTGAAGCAGGAAGAAAATGAATACTATTGACTACT  581

seq1  CTTAAATGCCAAAGAACTTTCTTGACCTTCAGCTTTTATTAACTCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGCCAAAGAACTTTCTTGACCTTCAGCTTTTATTAACTCATTTT  631

seq1  TTTTTCCTTAGGTGTAGGTATTTTTTGAATGTAGCTATTTAAAAAACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTAGGTGTAGGTATTTTTTGAATGTAGCTATTTAAAAAACTTT  681

seq1  CAAAAAGGAAAATTTATATTTAAACTCACATAAATGAATATTTTAAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGAAAATTTATATTTAAACTCACATAAATGAATATTTTAAACCT  731

seq1  ATGCCTAATTTATTCCAGATTATTGTTGTTATGGTTTTCCCAATACATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAATTTATTCCAGATTATTGTTGTTATGGTTTTCCCAATACATCT  781

seq1  GTTTTTGCAATTACATATTGAGGTAGGGAGTGAATTTATAGCATTGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGCAATTACATATTGAGGTAGGGAGTGAATTTATAGCATTGATGG  831

seq1  AGAAAGGATCTATTGCATGCATGGTACACAATTAGCCTCTGGTTTAGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGATCTATTGCATGCATGGTACACAATTAGCCTCTGGTTTAGTAG  881

seq1  TAGAATTGCCAGAGAGAAAAACAACATGAGGCTACTGATAGATTATCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGCCAGAGAGAAAAACAACATGAGGCTACTGATAGATTATCCTG  931

seq1  CATCTAATGAGCAGGCCTTAGGATATGTTTGGACTCCTCAGTATCATTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATGAGCAGGCCTTAGGATATGTTTGGACTCCTCAGTATCATTGG  981

seq1  CAGTTCATTCTATTTGAGCAGCCATAGATAAAATGTAGAGAAACTCTGTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATTCTATTTGAGCAGCCATAGATAAAATGTAGAGAAACTCTGTG  1031

seq1  CTCTAATTTGGCTTTTAAGTAAAGTTTCCATGAATTC  1087
      |||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTTGGCTTTTAAGTAAAGTTTCCATGAATTC  1068