BAC Information

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BAC

Clone NameB6Ng01-034N20
Chromosome7 (Build37)2 (Build37)
Map Location 129,335,543 - 129,336,084129,638,320 - 129,639,134
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2
Downstream gene2010110P09Rik, Prkcb1, LOC668486, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034N20.bB6Ng01-034N20.g
ACCDH863492DH863493
length683818
definitionDH863492|Mus musculus domesticus DNA, BAC clone: B6Ng01-034N20, 5' end.DH863493|Mus musculus domesticus DNA, BAC clone: B6Ng01-034N20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(129,335,543 - 129,336,084)(129,638,320 - 129,639,134)
sequence
gaattcagtttccctggtaacactggcttcaaagaaacctatacatgcca
tcccttttgcaacctgctagccagaagatcctggaagttgggagggtgga
gggttgggctgatcagttcttgtagaacacatatgacgtgctagcccggg
caccttccccaccctacaaccaacaaacaaagctaacaaatgtcatgccc
ctctctgcagcaaagcatatgtcctaaagtgttcctaatactcacctcgc
caaatgtctgcaccacagagtcaaatggctgtggaaaagagagcggtcag
gtccttaggagctgaagacacaggagggtgtgagctccctgatgctgaac
tcaagtcctccggaagagtagcaagtgcctttaaccactggccgtctctc
cagatccctgaaaatacatctctgctgagcatgctcagacagttttcttg
tcgttcctgaaacaacacggtaaaataggtgttcacatatcacttacacc
ggattttggtatttggtattatggacaaagtagaggtgattgaaggtgcc
tatgtatagattatctgcaagacctaaacccattttattggtagcttgag
ctcctgtagatgtcattatccctctcgatcttggagtcgatgttgcggac
actgaggattgctgaacacacgtcccccgttgt
gaattccaggttgtgtgagccaactaatttaggtgttagaacccaaactc
gggtcttccaaaagggcagcgagccacttaacctccgagttctctccagc
ctcaagaaataacttgatataaaagaaataggtgagcttgagaggagggg
actgggttttgggtatgtgccgcaagcgctcctgtccgttcattctgtag
ttccgactactggttggtgctgggcttatagtgccagttttactggcctg
ttttgccctgtcctggctgagcactatgaattgtgggatgggccccatct
gtgtaactggtgcctcgggcttcacttgtcaaatgaactgtatctgctgc
ttagttttgagaatcagaggctagagttggaaggggttgtgggtccccat
tctgcctacctcaggacacacggctgctcaggaggcgaaacttggggagt
ttattagttaaggcattttgtaagccaaaagagggtgaaggtcccctgat
gctgaaattacaggctgcgagcctcctgatttagctgttaaaacccaaac
tcaatgtcttctggaagagcagcaagccacttaactactgaactctctcc
aaccccaagaaacaatttttttaatgtttttcttcagatgaatgaattaa
taacaacataccaggttttgtgtcataagtaatcatattctatgaaaata
actatttctaaaaatttaagggtggctagcaatgttttgcaaccctgctt
taattcttgccttattatctcatggggctcttcattgaaatatggtatac
agctcattgtgtacttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129335543_129336084
seq2: B6Ng01-034N20.b_158_699

seq1  GTTCTTGTAGAACACATATGAGGTGCTAGCCCGGGCACCATCCCAGCCCT  50
      ||||||||||||||||||||| ||||||||||||||||| ||||  ||||
seq2  GTTCTTGTAGAACACATATGACGTGCTAGCCCGGGCACCTTCCCCACCCT  50

seq1  ACAACAAACAAACAAAGCTAACAAATGTCATGCCCCTCTCTGCAGCAGAG  100
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACAACCAACAAACAAAGCTAACAAATGTCATGCCCCTCTCTGCAGCAAAG  100

seq1  CATATGTCCTAAAGTGTTCCTAATACTCACCTCGCCAAATGTCTGCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTCCTAAAGTGTTCCTAATACTCACCTCGCCAAATGTCTGCACCA  150

seq1  CAGAGTCAAATGGCTGTGGAAAAGAGAGCGGTCAGGTCCTTAGGAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCAAATGGCTGTGGAAAAGAGAGCGGTCAGGTCCTTAGGAGCTGA  200

seq1  AGACACAGGAGGGTGTGAGCTCCCTGATGCTGAACTCAAGTCCTCCGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGGAGGGTGTGAGCTCCCTGATGCTGAACTCAAGTCCTCCGGAA  250

seq1  GAGTAGCAAGTGCCTTTAACCACTGGCCGTCTCTCCAGATCCCTGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCAAGTGCCTTTAACCACTGGCCGTCTCTCCAGATCCCTGAAAAT  300

seq1  ACATCTCTGCTGAGCATGCTCAGACAGTTTTCTTGTCATTCCTGAAACAA  350
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACATCTCTGCTGAGCATGCTCAGACAGTTTTCTTGTCGTTCCTGAAACAA  350

seq1  CACAGTAAAATAGGTGTTCACATATCACTTACACGGTATTTTGGTATTTG  400
      ||| |||||||||||||||||||||||||||||| | |||||||||||||
seq2  CACGGTAAAATAGGTGTTCACATATCACTTACACCGGATTTTGGTATTTG  400

seq1  GTATTATGGACAAAGTAGAGGTGATTTAAGGTGCCTATGTATAGGTTATA  450
      |||||||||||||||||||||||||| ||||||||||||||||| |||| 
seq2  GTATTATGGACAAAGTAGAGGTGATTGAAGGTGCCTATGTATAGATTATC  450

seq1  TGCAAGACCTAAACCAATTTTATTATTAGCTTGAGCTCCTGTAGATGTCA  500
      ||||||||||||||| ||||||||  ||||||||||||||||||||||||
seq2  TGCAAGACCTAAACCCATTTTATTGGTAGCTTGAGCTCCTGTAGATGTCA  500

seq1  TTATCCCTGTCGATCTTGGAGTCAATGTTGTGGACACTGAGG  542
      |||||||| |||||||||||||| |||||| |||||||||||
seq2  TTATCCCTCTCGATCTTGGAGTCGATGTTGCGGACACTGAGG  542

seq1: chr2_129638320_129639134
seq2: B6Ng01-034N20.g_70_887

seq1  GAATTCCAGGTTGTGTGAGCCAACTAATTTAGGTGTTAGAACCCAAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTGTGTGAGCCAACTAATTTAGGTGTTAGAACCCAAACTC  50

seq1  GGGTCTTCCAGAAGGGCAGCGAGCCACTTAACCTCCGAGTTCTCTCCAGC  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTCCAAAAGGGCAGCGAGCCACTTAACCTCCGAGTTCTCTCCAGC  100

seq1  CTCAAGAAATAACTTGATATAAAAGAAATAGGTGAGCTTGAGAGGAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAATAACTTGATATAAAAGAAATAGGTGAGCTTGAGAGGAGGGG  150

seq1  ACTGGGTTTTGGGTATGTGCCGCAAGCGCTCCTGTCCGTTCATTCTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTTTTGGGTATGTGCCGCAAGCGCTCCTGTCCGTTCATTCTGTAG  200

seq1  TTCCGACAACTGGTTGGTGCTGGGCTTATAGTGCCAGTTTTACTGGCCTG  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGACTACTGGTTGGTGCTGGGCTTATAGTGCCAGTTTTACTGGCCTG  250

seq1  TTTTGCCCTGTCCTGGCTGAGCACTATGAATTGTGGGATGGGCCCCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTGCCCTGTCCTGGCTGAGCACTATGAATTGTGGGATGGGCCCCATCT  300

seq1  GTGTAACTGGTGCCTCAGGCTTCAGTTGTCAGATGAGCTGTAGCTGCTGC  350
      |||||||||||||||| ||||||| |||||| |||| ||||| |||||||
seq2  GTGTAACTGGTGCCTCGGGCTTCACTTGTCAAATGAACTGTATCTGCTGC  350

seq1  TTAGTTTTGAGAATCAGAGGCTAGAGTTGGAAGGGGTTGTGGGTCCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTGAGAATCAGAGGCTAGAGTTGGAAGGGGTTGTGGGTCCCCAT  400

seq1  TCTGCCTACCTCAGGACACACGGCTGCTCAGGAGGCGAAACTTGGGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTACCTCAGGACACACGGCTGCTCAGGAGGCGAAACTTGGGGAGT  450

seq1  TTATTAGTTAAGGCATTTTGTAAGCCAGAAGAGGGTGAAGGTCCCCTGAT  500
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTATTAGTTAAGGCATTTTGTAAGCCAAAAGAGGGTGAAGGTCCCCTGAT  500

seq1  GCTGAAATTACAGGCTGCGAGCCACCTGATTTAGCTGTTAAAACCCAAAC  550
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTGAAATTACAGGCTGCGAGCCTCCTGATTTAGCTGTTAAAACCCAAAC  550

seq1  TC-AGGTCTTCTGGAAGAGCAGCAAGCCACTTAACTACTGAGCTCTCTCC  599
      || | |||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCAATGTCTTCTGGAAGAGCAGCAAGCCACTTAACTACTGAACTCTCTCC  600

seq1  AACCCCAAGAAACAATTTTTTTTAATG-TTTTCTTCAGATGAATGAATTA  648
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AACCCCAAGAAACAA-TTTTTTTAATGTTTTTCTTCAGATGAATGAATTA  649

seq1  ATAACAACATACCAG--TTTTTGTCATAAGTAATCATATTTTATGAAAAT  696
      |||||||||||||||  ||| ||||||||||||||||||| |||||||||
seq2  ATAACAACATACCAGGTTTTGTGTCATAAGTAATCATATTCTATGAAAAT  699

seq1  AACTATTTCTAAAAA-TTAAGGGTGGCTAGCAATGTTTTTGCAAACCTG-  744
      ||||||||||||||| ||||||||||||||||||| |||||||| |||| 
seq2  AACTATTTCTAAAAATTTAAGGGTGGCTAGCAATG-TTTTGCAACCCTGC  748

seq1  TTTAATTCTTGCCTTAATAATCTCATTGGGTTCTTCATTGTAATATGGTA  794
      ||||||||||||||| || ||||||| ||| ||||||||| |||||||||
seq2  TTTAATTCTTGCCTT-ATTATCTCATGGGGCTCTTCATTGAAATATGGTA  797

seq1  GACAGCTCATTGTGTACTTCT  815
       ||||||||||||||||||||
seq2  TACAGCTCATTGTGTACTTCT  818