BAC Information

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BAC

Clone NameB6Ng01-034P04
Chromosome2 (Build37)
Map Location 82,837,354 - 82,838,502
singlet/doubletsinglet
Overlap geneFsip2
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440
Downstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034P04.bB6Ng01-034P04.g
ACCDH863550DH863551
length8291,134
definitionDH863550|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P04, 5' end.DH863551|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaatttggagtttcat
taggtcccatttgtcaattctcgaacttacagcacaagccattgctgttc
tgttcaggaattttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgactatagtacaaggagataagtatggatcggttcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatcccttgagaaagactttttgctatcctaggtttttgttattccagat
gatttggcaaattgcctccttctaattcgatgaagaattgagttggaatt
tgatcgggatttgcattgatctgtagatgcttttggcaattgcattttta
catgtggatcttgccatccatgagccatg
gaattccactttcttcaatactttcaatattttcgccagatgtgggctga
caacatttgctcagggctaagaaccttttcaggttgcttgtgcttgttgc
tgtcttggaagaaacaacgtggctttctgcagatttttttacttgttgaa
cacgtcctccagatatttttcttaagcactggtctccaacaacttctcct
aggacaacctcctcctcatcagaaaccatgccctcacttaagctactatc
tgactcttttcgaccaatatcatgagctacaagccggatgatcagatctg
ttttgttattaatatctttcaaaagctctactctggtgatatcaggcctt
cttacgttttgaaatgaatttctgccaacagcctagaattgaaagtacaa
taaatattaaaaagaaatatattagtcactttcctgatattactttgtat
cataattcttatttatgattcctaactttaatctaaaatatatcttcaaa
taccatctctagtgtattttaactattttaaaataatgtagataaaaatc
atatgtaatatttgcttgtatatgccattattttagtgttatgatataaa
tctatcataatttattcaaatattcagtctaatagattggcttaagcttt
atattttattttaaaatgaacttactgttttttatttttgtcatttctct
taaaattgttatagaactacttgtatttttatgaagtcaataaggaactc
tatacaaatctagacattgttttattaaagaaatgtcaagattttataag
tatacctaattctacttataaaagcaatgacacattggaattgtgatctt
tatactacttttttcatagtttcattctttgtcttttgcaaaacatatgt
agtcttaatttctttctcatatgctactcaatgttctcttataattttat
tatatagatacatccaagaaatggtaactatattcaataccagattttct
ttatttctgtagccttggctatagcacagcaatatttctaatatagctaa
atttattattaactaatataaatatgggctgactcaactcttctctgcaa
cttccagcttattttcaaggtgatacgtcttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82837354_82838502
seq2: B6Ng01-034P04.g_69_1202 (reverse)

seq1  TTTAAGACGTTATCA-CTTGAAAATATAGCTTGGAAAGTTGCAGAGAAAG  49
      ||||||||| ||||| |||||||||| ||||  | |||||||||||||  
seq2  TTTAAGACG-TATCACCTTGAAAATA-AGCT--GGAAGTTGCAGAGAAGA  46

seq1  ATTGAGTCAGACAATAATTATAATTAGTTAATAATAAAATGTTAGCTAAT  99
       ||||||||| | ||| |||| ||||||||||||||||   |||||||  
seq2  GTTGAGTCAGCCCATATTTAT-ATTAGTTAATAATAAA--TTTAGCTA--  91

seq1  AATTAGAAATAATTGCTGTGCTATAGCCAAAGGCTACAGAAATAAAG-AG  148
       ||||||||| ||||||||||||||||| |||||||||||||||||| | 
seq2  TATTAGAAAT-ATTGCTGTGCTATAGCC-AAGGCTACAGAAATAAAGAAA  139

seq1  ATCTGGTTATTGAATTATAGTTACCATTTCTTGGATGTATCTATAATAAT  198
      |||||| ||||||| ||||||||||||||||||||||||||||| |||||
seq2  ATCTGG-TATTGAA-TATAGTTACCATTTCTTGGATGTATCTAT-ATAAT  186

seq1  AAAAATTATAAGAGAACATTTGAGTAGCATATGAGAAAGAAATTAAGACT  248
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  -AAAATTATAAGAGAACA-TTGAGTAGCATATGAGAAAGAAATTAAGACT  234

seq1  ACATATGTTTTTGCAAAAGACAAAGAATGAAACTATGAAAAAAGTAGTAT  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATG-TTTTGCAAAAGACAAAGAATGAAACTATGAAAAAAGTAGTAT  283

seq1  AAAGATCACAATTCCAATGTGTCATTGCTTTTATAAGTAGAATTAGGTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCACAATTCCAATGTGTCATTGCTTTTATAAGTAGAATTAGGTAT  333

seq1  ACTTATAAAATCTTGACATTTCTTTAATAAAACAATGTCTAGATTTGTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAAAATCTTGACATTTCTTTAATAAAACAATGTCTAGATTTGTAT  383

seq1  AGAGTTCCTTATTGACTTCATAAAAATACAAGTAGTTCTATAACAATTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCCTTATTGACTTCATAAAAATACAAGTAGTTCTATAACAATTTT  433

seq1  AAGAGAAATGACAAAAATAAAAAACAGTAAGTTCATTTTAAAATAAAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATGACAAAAATAAAAAACAGTAAGTTCATTTTAAAATAAAATA  483

seq1  TAAAGCTTAAGCCAATCTATTAGACTGAATATTTGAATAAATTATGATAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTAAGCCAATCTATTAGACTGAATATTTGAATAAATTATGATAG  533

seq1  ATTTATATCATAACACTAAAATAATGGCATATACAAGCAAATATTACATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATCATAACACTAAAATAATGGCATATACAAGCAAATATTACATA  583

seq1  TGATTTTTATCTACATTATTTTAAAATAGTTAAAATACACTAGAGATGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTATCTACATTATTTTAAAATAGTTAAAATACACTAGAGATGGT  633

seq1  ATTTGAAGATATATTTTAGATTAAAGTTAGGAATCATAAATAAGAATTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGATATATTTTAGATTAAAGTTAGGAATCATAAATAAGAATTAT  683

seq1  GATACAAAGTAATATCAGGAAAGTGACTAATATATTTCTTTTTAATATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAAAGTAATATCAGGAAAGTGACTAATATATTTCTTTTTAATATTT  733

seq1  ATTGTACTTTCAATTCTAGGCTGTTGGCAGAAATTCATTTCAAAACGTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTTCAATTCTAGGCTGTTGGCAGAAATTCATTTCAAAACGTAA  783

seq1  GAAGGCCTGATATCACCAGAGTAGAGCTTTTGAAAGATATTAATAACAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTGATATCACCAGAGTAGAGCTTTTGAAAGATATTAATAACAAA  833

seq1  ACAGATCTGATCATCCGGCTTGTAGCTCATGATATTGGTCGAAAAGAGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTGATCATCCGGCTTGTAGCTCATGATATTGGTCGAAAAGAGTC  883

seq1  AGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTAGCTTAAGTGAGGGCATGGTTTCTGATGAGGAGGAGGTTGTCC  933

seq1  TAGGAGAAGTTGTTGGAGACCAGTGCTTAAGAAAAATATCTGGAGGACGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAGTTGTTGGAGACCAGTGCTTAAGAAAAATATCTGGAGGACGT  983

seq1  GTTCAACAAGTAAAAAAATCTGCAGAAAGCCACGTTGTTTCTTCCAAGAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACAAGTAAAAAAATCTGCAGAAAGCCACGTTGTTTCTTCCAAGAC  1033

seq1  AGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAGCACAAGCAACCTGAAAAGGTTCTTAGCCCTGAGCAAATGTT  1083

seq1  GTCAGCCCACATCTGGCGAAAATATTGAAAGTATTGAAGAAAGTGGAATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCCACATCTGGCGAAAATATTGAAAGTATTGAAGAAAGTGGAATT  1133

seq1  C  1149
      |
seq2  C  1134