BAC Information

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BAC

Clone NameB6Ng01-035D09
Chromosome2 (Build37)
Map Location 78,428,631 - 78,429,664
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp533, BC003993, LOC667920, OTTMUSG00000016703, LOC383717
Downstream geneLOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526, Itga4, Cerkl, Neurod1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035D09.bB6Ng01-035D09.g
ACCDH863743DH863744
length1,0061,017
definitionDH863743|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D09, 5' end.DH863744|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaagacctatagagttatgctgtctgttaggtcaatgtctaac
cctatgtggctactaccctttgaaatgtggctgatacttaaatgagtaat
tctgtgactataaaaaggcactatcttgtaaagacttagtgcaacctaaa
tgtaaagaattccactagtaatatcttaatatttattatggttccaaatg
ataataatttaatgtgaattatatagaatacatgattaaaagtaattttt
atctgttttcaaacagggattatgctcttcagtcagaagtgctgaggtat
gcctttgagggatataatttcctatttgggtggggacattgaagaattaa
cttatagactgagtcatttctagaactatctatgaacaaacacaggatac
cctagaagtcatgtatcaaactaaacaggtgatcttaggtaaatgtatct
tatttttctaagaagatctgtgatacatttggacacatcacaggtttccc
atggttgagtcactttcaatggggcatgggcacctactgaatgtcttctg
tgccagtgtgtggctaattggccatatgcccagattgctacagccctctt
tgggtcagtaatagtcctggttcttgggtgaagaactgctcacctctcag
aggtgaattaactctttctgaacactagggcaccattaagcacactagaa
aaaaagtaatttactcaatggtcctctaacgacaccctggagaagagaac
agaagctgtgaaatgctaagctcgcatggaattactgcagaatcattagg
aaacagacaaattagatggcatgtgctctgtccaattgagacagaaagat
ctttatgggcagatgtattgcctgatggaaatgtgctagaaatttgtgtt
tctgagagactttgaaagaagagaagcatgctacattctgttctgttaat
atatgcatgctttgtgctagactataatactacatgctgctgtgcttcat
tcactt
gaattctctgtctagacctgtatgccatatttaaattggattatttagtt
tgttaatatctagtttcttgagtttttaaaatatattttgtatattagtc
ttctatcagatgtggagttggtaaaaattcttttctcattctgtaagctg
ctactttgtccatttgatgtgttctttgccttatagaagcttttcagttt
catgaggttccatttattaatttctaatcttagagcctgcactatctgtg
ttctgttcagagaatcatctcctgtgtcgatatgatcaaggctattcccc
attttcatctcaatcaggtttagtatatatggttttatgttgtggtcttt
gattgacttggatttgaatttcatccagggtgataatacatttgcatcct
tctacatacagatatccagtttgaccagcaccatttgttgaagatacttt
ccttttctactgtgcatttctggcttcttcataaaaaaccagttgttcat
atgtgtatagatttatatttgggtcttctcaattccattaatcaacatgt
ctgtttatatgacaataccatgtagtttttattactatagctcttttgta
caactggacaatgggggatggtaagacctccagcagctctttttattgtt
taggattattttagctatcctatttttcccccatatgaaagttgagaatt
gtcttttcaaggtttgtaaataattttgctgggatttcatggggattgca
ttgaatatgtagattgctttggtagggtggccattttttatatgtttact
ataaccataatgagcatgggagctctttccttcttctgatagcttgaaat
ttgtgtcatagaaatctctcactactgggagagtacccaaggatttaatt
attaaggctatcttgaagagtgttccctcgttttttctcatcattgtcat
tgtatacagaaggctacggaatttaggagtatttgaacccttgattgctg
aagggttttatcgaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78428631_78429664
seq2: B6Ng01-035D09.b_45_1050 (reverse)

seq1  AAGTGAAGGCA--ACAGCAGCATGTAGTTAATTATAAGTCTTAAAGCACA  48
      ||||||| | |  |||||||||||||||  ||||| |||||   ||||| 
seq2  AAGTGAATGAAGCACAGCAGCATGTAGT--ATTAT-AGTCT---AGCAC-  43

seq1  AAAGCATGCAATATATTTTAATACAGAACAGAAATGTTAGCATGCTTTCT  98
      ||||||||| |||||||     ||||||||| |||| |||||||    ||
seq2  AAAGCATGC-ATATATT----AACAGAACAG-AATG-TAGCATG----CT  82

seq1  TCTTTCCTTTCAAAGTCCTTCTCAGAAAACACAAATTTTCTTAGCCACAT  148
      ||| | |||||||||||  |||||| ||||||||||||   ||| |||||
seq2  TCTCTTCTTTCAAAGTC--TCTCAG-AAACACAAATTT--CTAG-CACAT  126

seq1  TTCCATCAGGCAATTACATCCTGCCCATAAAGATTCTTTCTGTCTCAATT  198
      ||||||||||||| ||||| ||||||||||||| ||||||||||||||||
seq2  TTCCATCAGGCAA-TACAT-CTGCCCATAAAGA-TCTTTCTGTCTCAATT  173

seq1  GGACAGAGCACATGCCATCTAATTTGTCTTGTTTCCCTAATTGATTCTGC  248
      |||||||||||||||||||||||||||| ||||| ||||| |||||||||
seq2  GGACAGAGCACATGCCATCTAATTTGTC-TGTTT-CCTAA-TGATTCTGC  220

seq1  AGTAATTCCATGCGAGCTTAGCATTTCACAGCTTCTGTTCTCTTCTCCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTCCATGCGAGCTTAGCATTTCACAGCTTCTGTTCTCTTCTCCAG  270

seq1  GGTGTCCTTAGAGGACCATTGAGTAAATTACTTTTTTTCTAGTGTGCTTA  348
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCGTTAGAGGACCATTGAGTAAATTACTTTTTTTCTAGTGTGCTTA  320

seq1  ATGGTGCCCTAGTGTTCAGAAAGAGTTAATTCACCTCTGAGAGGTGAGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCCCTAGTGTTCAGAAAGAGTTAATTCACCTCTGAGAGGTGAGCA  370

seq1  GTTCTTCACCCAAGAACCAGGACTATTACTGACCCAAAGAGGGCTGTAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCACCCAAGAACCAGGACTATTACTGACCCAAAGAGGGCTGTAGC  420

seq1  AATCTGGGCATATGGCCAATTAGCCACACACTGGCACAGAAGACATTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGGCATATGGCCAATTAGCCACACACTGGCACAGAAGACATTCAG  470

seq1  TAGGTGCCCATGCCCCATTGAAAGTGACTCAACCATGGGAAACCTGTGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCCCATGCCCCATTGAAAGTGACTCAACCATGGGAAACCTGTGAT  520

seq1  GTGTCCAAATGTATCACAGATCTTCTTAGAAAAATAAGATACATTTACCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAAATGTATCACAGATCTTCTTAGAAAAATAAGATACATTTACCT  570

seq1  AAGATCACCTGTTTAGTTTGATACATGACTTCTAGGGTATCCTGTGTTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACCTGTTTAGTTTGATACATGACTTCTAGGGTATCCTGTGTTTG  620

seq1  TTCATAGATAGTTCTAGAAATGACTCAGTCTATAAGTTAATTCTTCAATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGATAGTTCTAGAAATGACTCAGTCTATAAGTTAATTCTTCAATG  670

seq1  TCCCCACCCAAATAGGAAATTATATCCCTCAAAGGCATACCTCAGCACTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCCAAATAGGAAATTATATCCCTCAAAGGCATACCTCAGCACTT  720

seq1  CTGACTGAAGAGCATAATCCCTGTTTGAAAACAGATAAAAATTACTTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAAGAGCATAATCCCTGTTTGAAAACAGATAAAAATTACTTTTA  770

seq1  ATCATGTATTCTATATAATTCACATTAAATTATTATCATTTGGAACCATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTATTCTATATAATTCACATTAAATTATTATCATTTGGAACCATA  820

seq1  ATAAATATTAAGATATTACTAGTGGAATTCTTTACATTTAGGTTGCACTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTAAGATATTACTAGTGGAATTCTTTACATTTAGGTTGCACTA  870

seq1  AGTCTTTACAAGATAGTGCCTTTTTATAGTCACAGAATTACTCATTTAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTACAAGATAGTGCCTTTTTATAGTCACAGAATTACTCATTTAAG  920

seq1  TATCAGCCACATTTCAAAGGGTAGTAGCCACATAGGGTTAGACATTGACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCCACATTTCAAAGGGTAGTAGCCACATAGGGTTAGACATTGACC  970

seq1  TAACAGACAGCATAACTCTATAGGTCTTCTGAATTC  1034
      ||||||||||||||||||||||||||||||||||||
seq2  TAACAGACAGCATAACTCTATAGGTCTTCTGAATTC  1006