BAC Information

Click to search

BAC

Clone NameB6Ng01-036B14
Chromosome2 (Build37)
Map Location 69,855,937 - 69,973,624
singlet/doubletdoublet
Overlap geneMyo3b
Upstream geneLass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650
Downstream geneLOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8, 4833418A01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B14.bB6Ng01-036B14.g
ACCDH864385DH864386
length1,0311,008
definitionDH864385|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B14, 5' end.DH864386|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,972,569 - 69,973,624)(69,855,937 - 69,856,970)
sequence
gaattcacaaacaattcatgggggtacgggaggggagatcttagtcacaa
gcccagtgaggaagaaagtccagcttaccaggtggcagtttgaagcctcc
gcctcctgccttgcttagaagaaccagaggcacattttgttttcaccaag
cctctggtttaatcctctaatcctggtcctgttctctagcactcttctaa
gacggatgacagtgggtgtcagcttcgtctgtgagtccccctccctcctc
ttccccttccccagtgcctggctatcattcttcctagccaagaaacctga
actcattaggagtagccaggctctcctcatcgccctcctacccagcttgg
gtttctgtctcttccctgtgtttttggccttctaggctaagcaagagaaa
aacagttcactctgggagagaaaatggggactcaattttgagtccttgac
cttgtatctggggcttctgatactgttcccttacccaggaaacacacaca
gacacacacacgcaaatctagaatcctagggaaagttgagccttccaaag
ggctgcagccaagacagagagtataactcatcaattaagcataaagctgc
catgcacttgataagcaagccccttctaaagacaacagcatccccattca
gggtagatatagtgggagtcgggtcctagagcatccttgcttcctgatgg
acagctcctaccaccgcatccaagtgtaggcatagggacaggggctgtcc
atatctccatcaatgtttattaactccaaaggagtagtggaagatggata
tgaatagcaaattctttcatacagaggtgctgttttaaaacgtaagaatt
tataggatctgtcttcatctctcttagtcctatgtagtcatcattaatta
gctgaactttcaatgatgatctcatggtgtgctcatgggagctttcatcc
tcagctacaggaggaaatctgcagtgtgatagtcccgagatcttgcttag
taacaccagcaaacactgaaagacatttaca
gaattctatgatttttcttgttctctatgtacactggcaaggagtccact
acagccctattttttgggatgcagagccttcaagcaccctatcaccagtg
cttggttattgagacatagtctgattgttgatactccatgctgccttcaa
agtctttcttcaaacttgaactttcatattcctagattacagggctgcct
accacacccagatcagtgtgtatgcttcctaaacccaaaatagctctttt
gttgtctgaagagcgtttatagagttgctactgcctgtcaactattcatc
agatatgtgaccgctgcctaaaggaagcacccgttggtccgtttaggagc
taagtatttggaggatgcttgggtaaagtaaagaaggagcctctccttct
gtcacccgagctcctgtcacttgttctcagctctcctggtttcctgctgc
ccaaagtcattggggagtgtgacagctaaaatatcttgaaaatttctgtt
tcacatctaaaaggaagaagaagaattttcagtccttgccagctgcctgg
gacttctgccaactttttaccaaacagatcacccgttcatcagtgcctcg
tgtctggactggccagttgcagcgtttgacattataactcagtggtgttt
tgagataacatcatttacggagagacacgcagagcaaggaaaggtatgga
gagaagtggggggcaatgtgctttctaggtaggggactaatggaagaagt
caaatctaggtcgttggtggcagcaggttttaaactgaataagttgaaat
aatagttgagtcaagtcataagtagttaaaaagcagaaatatgtcactta
aaaaagaatactagctgttacttttggcttaagtctgtagattttattaa
atcatttaaacaacatcatagtgtgtgaaataaaaagttaagtaataata
gattcttagttgtaggttgttcatgttaaagtatgaatgaactaagatat
gtctgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69972569_69973624
seq2: B6Ng01-036B14.b_43_1073 (reverse)

seq1  TGTAAATGTCTATTCAGTGTGTGCTGGGTGTTACTAAAGCAAAGATCTCG  50
      ||||||||||| |||||||| |||| ||||||||| |||| |||||||| 
seq2  TGTAAATGTCT-TTCAGTGTTTGCT-GGTGTTACT-AAGC-AAGATCTC-  45

seq1  GGGGACTATTCACACTGCAAGGAATTTCCCTTCCCTTGTAGCTGAGGAAT  100
       ||||||| ||||||||||    ||||||  |||  ||||||||||||  
seq2  -GGGACTA-TCACACTGCA---GATTTCC--TCC--TGTAGCTGAGGA--  84

seq1  TGAAAGCTCCCATGAGCACCACCCATGAGATCAATCATTTGAAAGTTCAG  150
      |||||||||||||||||||   |||||||||| |||| ||||||||||||
seq2  TGAAAGCTCCCATGAGCAC--ACCATGAGATC-ATCA-TTGAAAGTTCAG  130

seq1  CTAATTAATTGATGACTACATTAGGAACTAAGAGAGAATGAAGACAGATT  200
      |||||||| ||||||||||| |||| |||||||||| ||||||||||| |
seq2  CTAATTAA-TGATGACTACA-TAGG-ACTAAGAGAG-ATGAAGACAGA-T  175

seq1  CCTAATAAATTCTTACGTTTT-ACACAGCACCTCTGTATGAAAGAATTTG  249
      ||| ||||||||||||||||| | ||||||||||||||||||||||||||
seq2  CCT-ATAAATTCTTACGTTTTAAAACAGCACCTCTGTATGAAAGAATTTG  224

seq1  CTATTCATATCCATCTTCCACTACTCCTTTGGAGTTAATAAACATTGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCATATCCATCTTCCACTACTCCTTTGGAGTTAATAAACATTGATG  274

seq1  GAGATATGGACAGCCCCTGTCCCTATGCCTACACTTGGATGCGGTGGTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATGGACAGCCCCTGTCCCTATGCCTACACTTGGATGCGGTGGTAG  324

seq1  GAGCTGTCCATCAGGAAGCAAGGATGCTCTAGGACCCGACTCCCACTATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTCCATCAGGAAGCAAGGATGCTCTAGGACCCGACTCCCACTATA  374

seq1  TCTACCCTGAATGGGGATGCTGTTGTCTTTAGAAGGGGCTTGCTTATCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTGAATGGGGATGCTGTTGTCTTTAGAAGGGGCTTGCTTATCAA  424

seq1  GTGCATGGCAGCTTTATGCTTAATTGATGAGTTATACTCTCTGTCTTGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGCAGCTTTATGCTTAATTGATGAGTTATACTCTCTGTCTTGGC  474

seq1  TGCAGCCCTTTGGAAGGCTCAACTTTCCCTAGGATTCTAGATTTGCGTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCCTTTGGAAGGCTCAACTTTCCCTAGGATTCTAGATTTGCGTGT  524

seq1  GTGTGTCTGTGTGTGTTTCCTGGGTAAGGGAACAGTATCAGAAGCCCCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTGTGTGTGTTTCCTGGGTAAGGGAACAGTATCAGAAGCCCCAG  574

seq1  ATACAAGGTCAAGGACTCAAAATTGAGTCCCCATTTTCTCTCCCAGAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGGTCAAGGACTCAAAATTGAGTCCCCATTTTCTCTCCCAGAGTG  624

seq1  AACTGTTTTTCTCTTGCTTAGCCTAGAAGGCCAAAAACACAGGGAAGAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTTTTCTCTTGCTTAGCCTAGAAGGCCAAAAACACAGGGAAGAGA  674

seq1  CAGAAACCCAAGCTGGGTAGGAGGGCGATGAGGAGAGCCTGGCTACTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCCAAGCTGGGTAGGAGGGCGATGAGGAGAGCCTGGCTACTCCT  724

seq1  AATGAGTTCAGGTTTCTTGGCTAGGAAGAATGATAGCCAGGCACTGGGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTCAGGTTTCTTGGCTAGGAAGAATGATAGCCAGGCACTGGGGA  774

seq1  AGGGGAAGAGGAGGGAGGGGGACTCACAGACGAAGCTGACACCCACTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGAGGAGGGAGGGGGACTCACAGACGAAGCTGACACCCACTGTC  824

seq1  ATCCGTCTTAGAAGAGTGCTAGAGAACAGGACCAGGATTAGAGGATTAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTCTTAGAAGAGTGCTAGAGAACAGGACCAGGATTAGAGGATTAAA  874

seq1  CCAGAGGCTTGGTGAAAACAAAATGTGCCTCTGGTTCTTCTAAGCAAGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGCTTGGTGAAAACAAAATGTGCCTCTGGTTCTTCTAAGCAAGGC  924

seq1  AGGAGGCGGAGGCTTCAAACTGCCACCTGGTAAGCTGGACTTTCTTCCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCGGAGGCTTCAAACTGCCACCTGGTAAGCTGGACTTTCTTCCTC  974

seq1  ACTGGGCTTGTGACTAAGATCTCCCCTCCCGTACCCCCATGAATTGTTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTTGTGACTAAGATCTCCCCTCCCGTACCCCCATGAATTGTTTG  1024

seq1  TGAATTC  1056
      |||||||
seq2  TGAATTC  1031

seq1: chr2_69855937_69856970
seq2: B6Ng01-036B14.g_69_1076

seq1  GAATTCTATGATTTTTCTTGTTCTCTATGTACACTGGCAAGGAGTCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATTTTTCTTGTTCTCTATGTACACTGGCAAGGAGTCCACT  50

seq1  ACAGCCCTATTTTTTGGGATGCAGAGCCTTCAAGCACCCTATCACCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCTATTTTTTGGGATGCAGAGCCTTCAAGCACCCTATCACCAGTG  100

seq1  CTTGGTTATTGAGACATAGTCTGATTGTTGATACTCCATGCTGCCTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTATTGAGACATAGTCTGATTGTTGATACTCCATGCTGCCTTCAA  150

seq1  AGTCTTTCTTCAAACTTGAACTTTCATATTCCTAGATTACAGGGCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCTTCAAACTTGAACTTTCATATTCCTAGATTACAGGGCTGCCT  200

seq1  ACCACACCCAGATCAGTGTGTATGCTTCCTAAACCCAAAATAGCTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACCCAGATCAGTGTGTATGCTTCCTAAACCCAAAATAGCTCTTTT  250

seq1  GTTGTCTGAAGAGCGTTTATAGAGTTGCTACTGCCTGTCAACTATTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTGAAGAGCGTTTATAGAGTTGCTACTGCCTGTCAACTATTCATC  300

seq1  AGATATGTGACCGCTGCCTAAAGGAAGCACCCGTTGGTCCGTTTAGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGTGACCGCTGCCTAAAGGAAGCACCCGTTGGTCCGTTTAGGAGC  350

seq1  TAAGTATTTGGAGGATGCTTGGGTAAAGTAAAGAAGGAGCCTCTCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATTTGGAGGATGCTTGGGTAAAGTAAAGAAGGAGCCTCTCCTTCT  400

seq1  GTCACCCGAGCTCCTGTCACTTGTTCTCAGCTCTCCTGGTTTCCTGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCGAGCTCCTGTCACTTGTTCTCAGCTCTCCTGGTTTCCTGCTGC  450

seq1  CCAAAGTCATTGGGGAGTGTGACAGCTAAAATATCTTGAAAATTTCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCATTGGGGAGTGTGACAGCTAAAATATCTTGAAAATTTCTGTT  500

seq1  TCACATCTAAAAGGAAGAAGAAGAATTTTCAGTCCTTGCCAGCTGCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTAAAAGGAAGAAGAAGAATTTTCAGTCCTTGCCAGCTGCCTGG  550

seq1  GACTTCTGCCAACTTTTTACCAAACAGATCACCCGTTCATCAGTGCCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGCCAACTTTTTACCAAACAGATCACCCGTTCATCAGTGCCTCG  600

seq1  TGTCTGGACTGGCCAGTTGCAGCGTTTGACATTATAACTCAGTGGTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGACTGGCCAGTTGCAGCGTTTGACATTATAACTCAGTGGTGTTT  650

seq1  TGAGATAACATCATTTACGGAGAGACACGCAGAGCAAGGAAAGGTATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAACATCATTTACGGAGAGACACGCAGAGCAAGGAAAGGTATGGA  700

seq1  GAGAAGTGGGGGGCAATGTGC-TTCTAGGTAGGGGACTAATGGAAGAAGT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAAGTGGGGGGCAATGTGCTTTCTAGGTAGGGGACTAATGGAAGAAGT  750

seq1  CAAATCTAGGTCGTTGGTGGCAGCAGGTTTTAAACTGATAAAGTTGAAAT  799
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  CAAATCTAGGTCGTTGGTGGCAGCAGGTTTTAAACTGAATAAGTTGAAAT  800

seq1  AATAGTTGAGTCAAGTCATAAGTAGTAAAAAAAGCAGAAATATGTCACTT  849
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AATAGTTGAGTCAAGTCATAAGTAGT-TAAAAAGCAGAAATATGTCACTT  849

seq1  AAAAAAGTATACTAGCTGTTACTTTTGGCTTAAGTCTGTAGATTTTAATT  899
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  AAAAAAGAATACTAGCTGTTACTTTTGGCTTAAGTCTGTAGATTTT-ATT  898

seq1  AAATCATTTAAACAACCATCATAGTGGTGTTGGAAAATAAAAAAAAGTTA  949
      ||||||||||||||| ||||||||||    ||  ||||   |||||||||
seq2  AAATCATTTAAACAA-CATCATAGTG----TGTGAAAT---AAAAAGTTA  940

seq1  AAGTTAATAAATAGTATTCTTAGTTGTAGAGTTGTCTCATGGTTAAAAGT  999
      |   |||| ||||| |||||||||||||| ||||| |||||  | |||||
seq2  A--GTAAT-AATAG-ATTCTTAGTTGTAG-GTTGT-TCATG--TTAAAGT  982

seq1  ATTTGATAATGAACACTAAAAGATTATGTCTGTAA  1034
      ||     |||||||     |||| |||||||||||
seq2  AT----GAATGAAC----TAAGA-TATGTCTGTAA  1008