BAC Information

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BAC

Clone NameB6Ng01-036F24
Chromosome2 (Build37)
Map Location 46,926,460 - 46,927,456
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036F24.bB6Ng01-036F24.g
ACCDH864569DH864570
length1,111989
definitionDH864569|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F24, 5' end.DH864570|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttgatacatagattctatgggtctatggactatatcacagt
tacactttatggttaatatccactgatgagtcagtatgtaccatatttgt
ctatctgaatctcaattacttcactcgggatgatttttcctagttccatc
catttacctggaagtttcatgatttatttttaattattattttttaatta
ttttatttatatcccaaatgttgctccccttccaggccctcctcccagag
tttctttttctctgagatagtactcctccagatactcccatcctctttcc
ctgggggattaagtctctacattattagtcacatcatctcctactgaggt
aagacaaggtagtcctctgttacgtatgtgccaggggccttggaccagcc
catgtatggtctttgttaggtggcttagattctgagatctcccagtagtc
caagttagctgacactcttgttcatcctatggggttgccatacttttaag
ctccttcaatccttctcctaactcttccataagggtcatctgacctcagt
ccaattgtgggctgtaagtatctgcatctctctcagtcagcttctggtag
aacctctaaggggacagccatgctaggctcctgtctacaagcacaaggta
gcatcagtaacagtgtcagggattgctgtctgcccatgggatggatccca
agttgggccagtttgtagatgacctttccttcagtctctgctccattttt
gtccctgaatttcttttagacagaaaacaatttctggatcaaaaattttt
gaaggtagggtgctgaccctatgcctcattgtattttaccatgctatttt
ttttaaaaaaaaataaaagcttgagtaataaatccatgtggtcaaagtag
cacattttctttgtgtattctaggatgagaacatttgagttgttttgagt
tctatgatacaataactggaaagcactctatcacaagctatatctcaatc
catgtatgattggtatcaattgtgcttcagaatatgtacaatatgatgca
ttaaaataattaatgtttataggaataaaaaaccaatataagctctagaa
atcttgatgta
gaattctaccaagacagataaagactagagatagacgttaattataaaga
acttaaagaaaacttttatgtttggagcttccctcttatgagtaggcagt
aggcagaaaagcttaggttattctatggtaagagtactttacctgaagtc
cattagctgtgataggtggataaacatcttctatttttatttgactccat
gaagcttacattaccatgacttgtactttgtattgaaatccatattgtag
gaaaagtagataacaggtctctggaaaacagcaggagtagactcacaact
ttgagtcataacaaatgctattgctttgggttaaaaaattatgaatatgt
gtttctcaaatatgaatatttgttgatctagagggctggatatacagatt
ggacagaggtttttttaagtagcatttttaagtttatatttagaagataa
tgtctagtcttactgcaacttgatatgccatgtttggttgataaccaaat
cacccagtggtttatcagtggttgtttactgatagcaaatcaagttaatt
tatacagtaaaagttatatatgaaacctgttcacctttaaataagaagct
tgttaataaggcaaaccttgtctgtgagtttgccctttttttttttttaa
atcaggcaaatcagggaaaaataatgcctttgttcttatgtgtacaatgc
attgacctgtcagttgctgctaaattgatgagcccgcaacaccatcagaa
atctgagaatgataaaatacatggcatataatccaaatggcttaggtatc
atttaaaatgacagagacttacctactacctagatgggtgcctagctccc
tggttctgatggatttatggaggcagcagtttattaactttgactgttat
ataagacagcatattcttcaggtaccacatagacagtatcagtctttgca
gcagactcgggtctgaggattttcatagagggacctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46926460_46927456
seq2: B6Ng01-036F24.g_65_1052 (reverse)

seq1  ACCAGGTTTCTCCTCTATGGAAAATCCCTCAGACCCGAGTCTGGCTGCCA  50
      |||||||    ||||||| |||||| |||||||||||||||| |||| ||
seq2  ACCAGGT---CCCTCTAT-GAAAAT-CCTCAGACCCGAGTCT-GCTG-CA  43

seq1  AAGACTGATACTGTCCTATGTGGTACCTGAAGAATAATGCTGTCTTATAT  100
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  AAGACTGATACTGT-CTATGTGGTACCTGAAGAAT-ATGCTGTCTTATAT  91

seq1  AACAGTCAAAGTTATATAACTGCTGCCTCCAATAAATCCATCAGAACCAG  150
      ||||||||||||||   ||||||||||||| |||||||||||||||||| 
seq2  AACAGTCAAAGTTAATAAACTGCTGCCTCC-ATAAATCCATCAGAACCA-  139

seq1  GGGAGCCTAGGGCAACCATCTAGGTAGTAGGTAAGTCTCTGTCATTTTAA  200
      ||||| ||| |||| |||||||||||||||||||||||||||||||||||
seq2  GGGAG-CTA-GGCACCCATCTAGGTAGTAGGTAAGTCTCTGTCATTTTAA  187

seq1  ATGATACCTAAGCCATTTGGATTATATTGCCATGTATTTTATCATTCTCA  250
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGATACCTAAGCCATTTGGATTATA-TGCCATGTATTTTATCATTCTCA  236

seq1  GATTTCTGATGGTGTTGCGGGCTCATCAATTTAGCAGCAACTGACAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGATGGTGTTGCGGGCTCATCAATTTAGCAGCAACTGACAGGTC  286

seq1  AATGCATTGTACACATAAGAAC-AAGGCATTATTTTTCCCTGATTGGCCT  349
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  AATGCATTGTACACATAAGAACAAAGGCATTATTTTTCCCTGATTTGCCT  336

seq1  GATT---AAAAAAAAAAAAGGCAAACTCACAGAC-AGGTTTGCCTTATTA  395
      ||||   ||||||||||| ||||||||||||||| |||||||||||||||
seq2  GATTTAAAAAAAAAAAAAGGGCAAACTCACAGACAAGGTTTGCCTTATTA  386

seq1  ACAAGCTTCTTATTTAAAGGTGAACAGGTTTCATATATAACTTTTACTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTTCTTATTTAAAGGTGAACAGGTTTCATATATAACTTTTACTGT  436

seq1  ATAAATTAACTTGATTTGCTATCAGTAAACAACCACTGATAAACCACTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAACTTGATTTGCTATCAGTAAACAACCACTGATAAACCACTGG  486

seq1  GTGATTTGGTTATCAACCAAACATGGCATATCAAGTTGCAGTAAGACTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGGTTATCAACCAAACATGGCATATCAAGTTGCAGTAAGACTAG  536

seq1  ACATTATCTTCTAAATATAAACTTAAAAATGCTACTTAAAAAAACCTCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATCTTCTAAATATAAACTTAAAAATGCTACTTAAAAAAACCTCTG  586

seq1  TCCAATCTGTATATCCAGCCCTCTAGATCAACAAATATTCATATTTGAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCTGTATATCCAGCCCTCTAGATCAACAAATATTCATATTTGAGA  636

seq1  AACACATATTCATAATTTTTTAACCCAAAGCAATAGCATTTGTTATGACT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATATTCATAATTTTTTAACCCAAAGCAATAGCATTTGTTATGACT  686

seq1  CAAAGTTGTGAGTCTACTCCTGCTGTTTTCCAGAGACCTGTTATCTACTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGTGAGTCTACTCCTGCTGTTTTCCAGAGACCTGTTATCTACTT  736

seq1  TTCCTACAATATGGATTTCAATACAAAGTACAAGTCATGGTAATGTAAGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACAATATGGATTTCAATACAAAGTACAAGTCATGGTAATGTAAGC  786

seq1  TTCATGGAGTCAAATAAAAATAGAAGATGTTTATCCACCTATCACAGCTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAGTCAAATAAAAATAGAAGATGTTTATCCACCTATCACAGCTA  836

seq1  ATGGACTTCAGGTAAAGTACTCTTACCATAGAATAACCTAAGCTTTTCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTCAGGTAAAGTACTCTTACCATAGAATAACCTAAGCTTTTCTG  886

seq1  CCTACTGCCTACTCATAAGAGGGAAGCTCCAAACATAAAAGTTTTCTTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGCCTACTCATAAGAGGGAAGCTCCAAACATAAAAGTTTTCTTTA  936

seq1  AGTTCTTTATAATTAACGTCTATCTCTAGTCTTTATCTGTCTTGGTAGAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTATAATTAACGTCTATCTCTAGTCTTTATCTGTCTTGGTAGAA  986

seq1  TT  997
      ||
seq2  TT  988