BAC Information

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BAC

Clone NameB6Ng01-036G06
Chromosome2 (Build37)
Map Location 41,102,796 - 41,103,817
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC666531, LOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036G06.bB6Ng01-036G06.g
ACCDH864581DH864582
length1,0641,185
definitionDH864581|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G06, 5' end.DH864582|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttctaaaatgtgcagtttgtctatgtccatgagaattctaaa
ttgtatctgaaaatcaagccaagtcagtagggagctgcatttttgatgac
tgcttctgccctcaagaactctcagtagaacttggttttggcattttgcc
cttaggttgaaggagagaactgttccaagtatacacaggaaagcctcggt
taggcttcctgagatgtagtatctgaaggcagtacatcatattgtgacct
ctttatctatgtacccatgggacacatttctttcagggccatgtgccaga
aaaagctatatattggaaatataaaattttaactgatcatatttctgtct
tggctttagctgcaaaatatcagagtcagatttgtgagccatctccacta
gtcgtaaaaggattgcatctacactattagttttagtctagtgttgatag
acaaatctattattttctttcacctcgaatattgagatcaatagtgctgt
ctagcctttcttagagagtgtatttgtttaagtttctttaatcttctttt
tggaaagagagtgagctttcttattgaacatgagtgactccaaattaacc
cacaattactgaaccactttctcagctactgcatatttggcagtctcgct
aataggtaatgtataatgtggaattcagcagaaaatgaagtgacagttag
gccactgaattctagtgtatattattcaatctctgctcctggacagtaca
tgaacacagaaaagggactctgtcactatcagctgatattacggtatgca
gaaaagatcatctgttaacagaaaatcacatttaagtaaatatatttata
aactgtaatgtgcctaaaaggtttttccctgacattgaggcatactcaca
catgaataattcattataattacacatgtgtttatttaatttgtactagc
tcagactgattataatgtatacctgtgagcagtgtctaccctatgtactc
tctcagcactacaactgactgactaatttgtttgaaagtcttgtatgcat
tcagaaaactgcaa
gaattcaaggcccacacataaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagttggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacactg
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattagaaaagaagaagtcaatttatcactttttgcagatgatat
aatagtatatatgtgaccctaaaaattccacgagagatgtcctaaacctg
acaaacagcttcaatgaagaagctggatataaaattaactcaaacaagtc
agtggcctttctctacacagagaataaacaggctgagaaagaaattaggg
aaacaacacccttctcaatagtcacaaataatataaaatatcttggcgtg
actctaactaaggaagtgaaagatctgtatgataagaacttcaagtctct
gaagaaagaaattaaagatctcagaagatggaaagatctcccatgcttat
ggattggcaggatcaacattgtaaaaaatggctatcttgccaaaagcaat
ctacagattcaatgcaatccccatcaaaatccaaatcaattcttcaatga
attaaaaagagcaatctgcaaattcatctggagtaactaaaaaacctaag
atagcaaaaactcttctcaaggataaaagaacctctggtggaatcaccat
gcctgacctaaagctttactacagagcaattgtgataaaaactgcatggt
cctggtatagtgacagacaagtagaccaatggaatagattgaagatccag
agatgaacccacacacctatggtcacttgatctttgacagggagctaagc
catccagtgaaaaagacgcattttcacaatggtgctggctactggtgtta
tcatgtagagatgcaatgatcatctatctctgtactaagtcatctagtga
tcagatctcccataacgagacgtgaactatgagagagcttgaagccgaga
atgtcagggatatcctgatgaccatgctggcgtgaatcgatgcatggacc
ttgaatcgagcttagcagacgtctagacaagccaatgagtccactcatac
agtggacaatcgatatgagctagtgggacgaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41102796_41103817
seq2: B6Ng01-036G06.b_106_1110

seq1  AAAATCAAGCCAAGTCAGTAGGGAGCTGCATTTTTGATGACTGCTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAGCCAAGTCAGTAGGGAGCTGCATTTTTGATGACTGCTTCTGC  50

seq1  CCTCAAGAACTCTCAGTAGAACTTGGTTTTGGCATTTTGCCCTTAGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGAACTCTCAGTAGAACTTGGTTTTGGCATTTTGCCCTTAGGTTG  100

seq1  AAGGAGAGAACTGTTCCAAGTATACACAGGAAAGCCTCGGTTAGGCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGAACTGTTCCAAGTATACACAGGAAAGCCTCGGTTAGGCTTCC  150

seq1  TGAGATGTAGTATCTGAAGGCAGTACATCATATTGTGACCTCTTTATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTAGTATCTGAAGGCAGTACATCATATTGTGACCTCTTTATCTA  200

seq1  TGTACCCATGGGACACATTTCTTTCAGGGCCATGTGCCAGAAAAAGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCATGGGACACATTTCTTTCAGGGCCATGTGCCAGAAAAAGCTAT  250

seq1  ATATTGGAAATATAAAATTTTAACTGATCATATTTCTGTCTTGGCTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGAAATATAAAATTTTAACTGATCATATTTCTGTCTTGGCTTTAG  300

seq1  CTGCAAAATATCAGAGTCAGATTTGTGAGCCATCTCCACTAGTCGTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAATATCAGAGTCAGATTTGTGAGCCATCTCCACTAGTCGTAAAA  350

seq1  GGATTGCATCTACACTATTAGTTTTAGTCTAGTGTTGATAGACAAATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCATCTACACTATTAGTTTTAGTCTAGTGTTGATAGACAAATCTA  400

seq1  TTATTTTCTTTCACCTCGAATATTGAGATCAATAGTGCTGTCTAGCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTTTCACCTCGAATATTGAGATCAATAGTGCTGTCTAGCCTTT  450

seq1  CTTAGAGAGTGTATTTGTTTAAGTTTCTTTAATCTTCTTTTTGGAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGAGTGTATTTGTTTAAGTTTCTTTAATCTTCTTTTTGGAAAGAG  500

seq1  AGTGAGCTTTCTTATTGAACATGAGTGACTCCAAATTAACCCACAATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTTTCTTATTGAACATGAGTGACTCCAAATTAACCCACAATTAC  550

seq1  TGAACCACTTTCTCAGCTACTGCATATTTGGCAGTCTCGCTAATAGGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCACTTTCTCAGCTACTGCATATTTGGCAGTCTCGCTAATAGGTAA  600

seq1  TGTATAATGTGGAATTCAGCAGAAAATGAAGTGACAGTTAGGCCACTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATGTGGAATTCAGCAGAAAATGAAGTGACAGTTAGGCCACTGAA  650

seq1  TTCTAGTGTATATTATTCAATCTCTGCTCCTGGACAGTACATGAACACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGTATATTATTCAATCTCTGCTCCTGGACAGTACATGAACACAG  700

seq1  AAAAGGGACTCTGTCACTATCAGCTGATATTACGGTATGCAGAAAAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGACTCTGTCACTATCAGCTGATATTACGGTATGCAGAAAAGATC  750

seq1  ATCTGTTAACAGAAAATCACATTTAAGTAAATATATTTTATAAACTGTAA  800
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATCTGTTAACAGAAAATCACATTTAAGTAAATATA-TTTATAAACTGTAA  799

seq1  TGTGCCTAAAAGGTTTTTTCCCTGACATTGAGGCATACTCACACATGAAT  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTAAAAGG-TTTTTCCCTGACATTGAGGCATACTCACACATGAAT  848

seq1  AATTCATTATTAATTACACATGTGTTTATTTAATTTGTACTAGCTCAGAC  900
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTA-TAATTACACATGTGTTTATTTAATTTGTACTAGCTCAGAC  897

seq1  TGAATTATAAATGTATACCTGTTGAGCAAGTGGTCTACCCTAAGGTACTC  950
      || ||||| |||||||||||| ||||| ||| ||||||||| | ||||||
seq2  TG-ATTAT-AATGTATACCTG-TGAGC-AGT-GTCTACCCT-ATGTACTC  941

seq1  TCTCAGCACTACAAACTGACTGACTAATTTTGTTTTGAAAAGGTCTTGTT  1000
      |||||||||||| |||||||||||||||||   |||||||  |||||| |
seq2  TCTCAGCACTAC-AACTGACTGACTAATTT--GTTTGAAA--GTCTTG-T  985

seq1  ATGCATCCCAGAAAAACTGCAA  1022
      ||||||  ||| ||||||||||
seq2  ATGCAT-TCAG-AAAACTGCAA  1005