BAC Information

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BAC

Clone NameB6Ng01-036K07
Chromosome2 (Build37)
Map Location 21,246,507 - 21,247,209
singlet/doubletsinglet
Overlap genenone
Upstream geneEtl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1
Downstream geneGpr158, LOC637235, Myo3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036K07.bB6Ng01-036K07.g
ACCDH864752DH864753
length765702
definitionDH864752|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K07, 5' end.DH864753|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgttccccacttttaaatataggattatttgg
ttgtctggagtataacttcttgagttctttgtacatttcggatgttagcc
ctctatcagatatagggttggtaatcttttcccaatctgttggttgccat
tttgtcttattgctttacagaagcttttcaattttatgaggtcccatttg
tcaattcttgaccttagagcaaaagccactggtgttctgttaaggaaatt
ttcccctgtgcccatgtgctcgaggatcttccccactttcttttatatta
gtttcagtgtatctggttttatgtggaggtttttgacacacgtggacttg
agctttgtacaaggagataggaatggatctatttgcattcttccacatgc
tgacctccagttgaaccagcaccatttgttgaaaatgctatctttttttc
attggatggttttagctcctttgttaaagatcactatagttgtgtgggtc
catttctgggtcttcagttctgctccattgatctacctgcctgtctctgt
accaatactatgcatcttttttgttttgttttttggttttgttttgtttg
tttgtttgtttgtttgttttatcaccattgctctggttatacagcttaag
atcaggaatgggtattctcccagaagttcttttattgttggagaatagtt
tctctaactgagtttttttgttattccaatggaatttgaattttgctcta
agaaagaattgatgt
gaattccatctttgtaggatatcgggcagatagccacatcatgagagctg
actcaaaagcagagagcaggttagaaccacaagtagctataaccttcaag
gcccgatccccaagtcgtactgcctacagttcaaacccacatctcagggg
ggtccacagaatcctaaactggcatcaccacctgagtaccatgagttcaa
acatattagcctattgggacacattcagaccattggatctgcatttgtgc
tactgagagcaaatttaggtcatgatctctgaattggcttcaggaataat
ttagggatccaccaatagtgctatattcttggctctcatgagacttgctg
ttgatcattgtgccttcgttccatgaaagttttatttttgtttgtttgtt
tagttttgttggtactaaataataagtatctaaccactctgtgctgtata
ccacactgatcaccacaaaaagtggttgtgatttggggtgtggattcgct
ctattctttgtgactctcccgcacccagaaagaaaacctcacgtttattt
tgcatcttaccccttaaaaaaaaaagtattgtttataaaaggctaagata
taaagagcggggacgggaacttaggtacaaaacagtgaaaaattttctca
agggaccttgaaaccacttacccagacctctgggtcaaacccccagaagc
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21246507_21247209
seq2: B6Ng01-036K07.g_66_767

seq1  GAATTCCATCTTTGTAGGATATCGGGCAGATAGCCACATCATGAGAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTTTGTAGGATATCGGGCAGATAGCCACATCATGAGAGCTG  50

seq1  ACTCAAAAGCAGAGAGCAGGTTAGAACCACAAGTAGCTATAACCTTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAAGCAGAGAGCAGGTTAGAACCACAAGTAGCTATAACCTTCAAG  100

seq1  GCCCGATCCCCAAGTCGTACTGCCTACAGTTCAAACCCACATCTCAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGATCCCCAAGTCGTACTGCCTACAGTTCAAACCCACATCTCAGGGG  150

seq1  GGTCCACAGAATCCTAAACTGGCATCACCACCTGAGTACCATGAGTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCACAGAATCCTAAACTGGCATCACCACCTGAGTACCATGAGTTCAA  200

seq1  ACATATTAGCCTATTGGGACACATTCAGACCATTGGATCTGCATTTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAGCCTATTGGGACACATTCAGACCATTGGATCTGCATTTGTGC  250

seq1  TACTGAGAGCAAATTTAGGTCATGATCTCTGAATTGGCTTCAGGAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGAGCAAATTTAGGTCATGATCTCTGAATTGGCTTCAGGAATAAT  300

seq1  TTAGGGATCCACCAATAGTGCTATATTCTTGGCTCTCATGAGACTTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGATCCACCAATAGTGCTATATTCTTGGCTCTCATGAGACTTGCTG  350

seq1  TTGATCATTGTGCCTTCGTTCCATGAAAGTTTTATTTTTGTTTGTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATTGTGCCTTCGTTCCATGAAAGTTTTATTTTTGTTTGTTTGTT  400

seq1  TTGTTTTGTTTTTACTAAATAATAAGTATCTAACCACTCTGTGCTTTATA  450
      | ||||||||  ||||||||||||||||||||||||||||||||| ||||
seq2  TAGTTTTGTTGGTACTAAATAATAAGTATCTAACCACTCTGTGCTGTATA  450

seq1  CCACACTGATCACCAC-AGAAGTGGTTGTGATTT-GGGTGTGGATTCGCT  498
      |||||||||||||||| | ||||||||||||||| |||||||||||||||
seq2  CCACACTGATCACCACAAAAAGTGGTTGTGATTTGGGGTGTGGATTCGCT  500

seq1  CTATTCTTTGTGACTCTCCAGCACCCTGTAAGAAAGCTCTCA-TTCAATT  547
      ||||||||||||||||||| |||||| | |||||| | ||||  |  |||
seq2  CTATTCTTTGTGACTCTCCCGCACCCAGAAAGAAAAC-CTCACGTTTATT  549

seq1  CTGCATCTTACCCTTCAGAAGAAGAGGTATTGTTTATAAAAGACTTAGAG  597
       |||||||||||| | | || || | |||||||||||||||| || ||| 
seq2  TTGCATCTTACCCCTTAAAAAAAAAAGTATTGTTTATAAAAGGCTAAGAT  599

seq1  ATAGAAGAGTCAGGCACAGGAACTTAGGTACCAAAGCAGTGCAAGAGTCT  647
      ||| ||||| | || || |||||||||||| |||| ||||| || | | |
seq2  ATA-AAGAG-CGGGGACGGGAACTTAGGTA-CAAAACAGTGAAAAATTTT  646

seq1  CT-AAGTGAACTTGATAGCACTTACCCAGACCTCTGGCTCAGAACCCCCA  696
      || ||| || ||||| | ||||||||||||||||||| ||| ||||||||
seq2  CTCAAGGGACCTTGAAACCACTTACCCAGACCTCTGGGTCA-AACCCCCA  695

seq1  GAGGCAA  703
      || ||||
seq2  GAAGCAA  702