BAC Information

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BAC

Clone NameB6Ng01-036K10
Chromosome2 (Build37)
Map Location 164,375,245 - 164,469,521
singlet/doubletdoublet
Overlap geneLOC670507, Wfdc2, OTTMUSG00000016288, Wfdc6a, Spinlw1, Wfdc8, Wfdc6b, Wfdc16
Upstream geneHnf4a, 5830472M02Rik, Serinc3, Pkig, Ada, Wisp2, Kcnk15, Rims4, Ywhab, LOC381404, Tomm34, Stk4, Kcns1, Wfdc5, Wfdc12, Wfdc15a, Wfdc15b, Svs2, Svs3b, Svs4, Svs3a, Svs6, Svs5, Slpi, Matn4, Rbpjl, Sdc4, 2610042O14Rik, 1700126L10Rik, Dbndd2, Pigt
Downstream geneOTTMUSG00000001088, Wfdc10, LOC629761, Wfdc13, Spint4, OTTMUSG00000016293, Wfdc3, Dnttip1, Ube2c, Tnnc2, Snx21, Acot8, Zswim3, Zswim1, 1700020C07Rik, Neurl2, Ctsa, Pltp, F730014I05Rik, Zfp335, LOC629777, Mmp9, Slc12a5, Ncoa5, Cd40, Cdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3, 2810408M09Rik, Slc2a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036K10.bB6Ng01-036K10.g
ACCDH864758DH864759
length468242
definitionDH864758|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K10, 5' end.DH864759|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,469,048 - 164,469,521)(164,375,245 - 164,375,500)
sequence
aaaataaagagatggaaaggccaaggtatgcctcttggcacccgaggatt
cagaaaagcacaagaagtgactgggttgttcttagtttatagcatgcaca
gtgcgcacagagtttggggtagccaggcagtaacgcaacccagagcatta
gtgagttattcccagccccacaaagccttagaaggacagcaactgccaac
aggtgtaagtgatgcgatgccccagggaggaaacagtcaggcaagcctga
aggagccagtgtgctgagggaacacacaaccctcatgcccaagagtcatg
tggggacagagcgacatggttggctaagggtcaggttttcatttttggtc
ctggttccctagttatcctgatagtactgtgggaaacagtacttccttgt
aaaacaatttgtattacatgtatgcatgtatgtatgtatgtatgtatgta
tgtatgtatgtatgtatg
caggcagaggaagtgataggcacggagaccccagggcaaacagtgtggag
ggcagagggagaaggctgggaaacccaggctcagaaagggacagggatca
agtgaggcagagtctgggagctcactttagcatttcggattttttcccct
ccccttccccctcccctcccctcccctcccctcttatctcctctcctgct
cgatcctgtccactcctgttctgttccctctttttccctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_164469048_164469521
seq2: B6Ng01-036K10.b_46_519 (reverse)

seq1  CATACATACATACATACATACATACATACATACATACATACATGCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACATACATACATACATACATACATACATACATACATGCATACA  50

seq1  TGTAATACAAATTGTTTTACAAGGAAGTACTGTTTCCCACAGTACTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACAAATTGTTTTACAAGGAAGTACTGTTTCCCACAGTACTATCA  100

seq1  GGATAACTAGGGAACCAGGACCAAAAATGAAAACCTGACCCTTAGCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACTAGGGAACCAGGACCAAAAATGAAAACCTGACCCTTAGCCAAC  150

seq1  CATGTCGCTCTGTCCCCACATGACTCTTGGGCATGAGGGTTGTGTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCGCTCTGTCCCCACATGACTCTTGGGCATGAGGGTTGTGTGTTCC  200

seq1  CTCAGCACACTGGCTCCTTCAGGCTTGCCTGACTGTTTCCTCCCTGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCACACTGGCTCCTTCAGGCTTGCCTGACTGTTTCCTCCCTGGGGC  250

seq1  ATCGCATCACTTACACCTGTTGGCAGTTGCTGTCCTTCTAAGGCTTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCATCACTTACACCTGTTGGCAGTTGCTGTCCTTCTAAGGCTTTGTG  300

seq1  GGGCTGGGAATAACTCACTAATGCTCTGGGTTGCGTTACTGCCTGGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGAATAACTCACTAATGCTCTGGGTTGCGTTACTGCCTGGCTAC  350

seq1  CCCAAACTCTGTGCGCACTGTGCATGCTATAAACTAAGAACAACCCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTCTGTGCGCACTGTGCATGCTATAAACTAAGAACAACCCAGTC  400

seq1  ACTTCTTGTGCTTTTCTGAATCCTCGGGTGCCAAGAGGCATACCTTGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGTGCTTTTCTGAATCCTCGGGTGCCAAGAGGCATACCTTGGCC  450

seq1  TTTCCATCTCTTTATTTTGAATTC  474
      ||||||||||||||||||||||||
seq2  TTTCCATCTCTTTATTTTGAATTC  474

seq1: chr2_164375245_164375500
seq2: B6Ng01-036K10.g_72_313

seq1  CAGGCAGAGGAAGTGATAGGCACGGAGACCCCAGGGCAAACAGTGTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAGGAAGTGATAGGCACGGAGACCCCAGGGCAAACAGTGTGGAG  50

seq1  GGCAGAGGGAGAAGGCTGGGAAACCCAGGCTCAGAAAGGGACAGGGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGGAGAAGGCTGGGAAACCCAGGCTCAGAAAGGGACAGGGATCA  100

seq1  AGTGAGGCAGAGTCTGGGAGCTCACTTTAGCATTTCGGATTTTTTCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGCAGAGTCTGGGAGCTCACTTTAGCATTTCGGATTTTTTCCCCT  150

seq1  CCCCTTCCCCCTCCCCTCCCCTCCCCTCCCCTCTTCTCTCCTCTCCTGCT  200
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCCCTTCCCCCTCCCCTCCCCTCCCCTCCCCTCTTATCTCCTCTCCTGCT  200

seq1  CTATCCTGTCCTCTCCTGTCCTGTCCCCTCCCCTCCCCTCCCCTCCCCTC  250
      | ||||||||| ||||||| |||| |||||   |              ||
seq2  CGATCCTGTCCACTCCTGTTCTGTTCCCTCTTTT--------------TC  236

seq1  CCTTTT  256
      ||||||
seq2  CCTTTT  242