BAC Information

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BAC

Clone NameB6Ng01-036M11
Chromosome2 (Build37)
Map Location 36,454,303 - 36,455,243
singlet/doubletsinglet
Overlap genenone
Upstream geneDab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344
Downstream geneOlfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26, Rabgap1, Gpr21, 6430510M02Rik, Strbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036M11.bB6Ng01-036M11.g
ACCDH864844DH864845
length1,205937
definitionDH864844|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M11, 5' end.DH864845|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagccctgtaccccatttttaatggggttatttgattt
tctggagtccagcttcttgaattatttgtatatatgggatattagtcacc
tattacatttaggcttggtaaatatcctttccctatctgttggtgaactt
tttgtcttattgacactgtcttgtgctttaaagaagctttgcaattttat
gaggttccatttgtcaattcttgatattacagcacaagccattgctgttc
tgttcaggaattttccccctgtgtccatatattccaggtttttcactact
ttctcctctataagttccagactctctggttttatgtagagttccttgat
cctcttagacttgagctttctacaaggagataagaatggatcaattcact
ttttttttacatgataactgccagttatgccagcaccttttgttgaaaat
gctatcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtctgtgggttcatttctgggtcttcaattctattctattga
tctgtctgttgctgtaccagtaccatgcagtttttaccacaattgctctg
tagtacagcttgaggtcagggatggtgattccaccagaggttctttttat
tgttgagaatagtttctgctatcctaggttttttgttatttcagatgaat
ttgcaaattgccctctgtaactcagtgaagaattgaatttggaattttga
tggggattgcactgaatctgtagattgcttttggcaagatagccattttt
actatatttattcctgccaatccatgagcatgggagatctttacatctct
gaagatctttcacttctttcttcagagacatgaagttcttatcatacaga
tctttcacttccttagttagggtcacacaaagttatttatatatttgtga
ctattgtgaaggttgttgtttcctaatttctttccagcctgattatcctt
tgtgtgaagaaggcaactgatttgtttgagtattttatatccagctactg
cctggaggctgttacctggtgagaaggtcacatccactccagtagtacat
catatacagtctgtaagccctggaacaatactaaggcaggagttctggaa
cttacctcctgaccttggactctcaatacgagcacccatatttgtcctga
tatgt
gaattcctgaatgagggttgtccaaaaatgtaatttgttacttatagctc
tatagttactctcagagatggaaccagaagttccagttgcagttgcaaca
tttgcaccagaacaagaagctggtctattctggggacatactgactttta
gctccaccaccgcactctgcttagatacagatccagtactgatgccttgc
tcccagctgcagttgaggctattggaagaatcaaaacagagctaacccca
gcaccacaccaccactagctccaccactagtggaatttgagacagggtcc
ggcaaatgatggaacttttgtgtcctgtctagagttacctccagtgctgc
attaacgcatttgaaaagaagacattaacaattgcctctggttgatattg
gctagaatggcatgataggaacctcaccagaatgatcataatggttttgt
tttggtatatatttgactaaattaactacctgacccattattatctagtt
ataatgatttataatgaattattctgagaatataattttattctgacata
tacatttgcacatacatatgcatatacatatacattaggtaaactatgaa
aatagaataaaactacagcttacatgcagaaaaactaattagaaaggtca
ctattggatgttatttcttcattctattatttattacttaagtatatatt
ctatgcaccagttcatgaagctgcacactcacttctgctctttctggttt
ttctaaaaatccatttaaaacacatattttaaaaattgcttctgaaagtt
tcatgtgtaagtattatattacatcattctactccctttttcccaattcc
ctgtcatgggctggtcatgcttgcaatattacacaacttataattcttta
gcattattggtaaggtgcatgtgtgggtgtgcgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36454303_36455243
seq2: B6Ng01-036M11.g_68_1004

seq1  GAATTCCTGAATGAGGGTTGTCCAAAAATGTAATTTGTTACTTATAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAATGAGGGTTGTCCAAAAATGTAATTTGTTACTTATAGCTC  50

seq1  TATAGTTACTCTCAGAGATGGAACCAGAAGTTCCAGTTGCAGTTGCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTACTCTCAGAGATGGAACCAGAAGTTCCAGTTGCAGTTGCAACA  100

seq1  TTTGCACCAGAACAAGAAGCTGGTCTATTCTGGGGACATACTGACTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACCAGAACAAGAAGCTGGTCTATTCTGGGGACATACTGACTTTTA  150

seq1  GCTCCACCACCGCACTCTGCTTAGATACAGATCCAGTACTGATGCCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCACCGCACTCTGCTTAGATACAGATCCAGTACTGATGCCTTGC  200

seq1  TCCCAGCTGCAGTTGAGGCTATTGGAAGAATCAAAACAGAGCTAACCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCTGCAGTTGAGGCTATTGGAAGAATCAAAACAGAGCTAACCCCA  250

seq1  GCACCACACCACCACTAGCTCCACCACTAGTGGAATTTGAGACAGGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACACCACCACTAGCTCCACCACTAGTGGAATTTGAGACAGGGTCC  300

seq1  GGCAAATGATGGAACTTTTGTGTCCTGTCTAGAGTTACCTCCAGTGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATGATGGAACTTTTGTGTCCTGTCTAGAGTTACCTCCAGTGCTGC  350

seq1  ATTAACGCATTTGAAAAGAAGACATTAACAATTGCCTCTGGTTGATATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACGCATTTGAAAAGAAGACATTAACAATTGCCTCTGGTTGATATTG  400

seq1  GCTAGAATGGCATGATAGGAACCTCACCAGAATGATCATAATGGTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATGGCATGATAGGAACCTCACCAGAATGATCATAATGGTTTTGT  450

seq1  TTTGGTATATATTTGACTAAATTAACTACCTGACCCATTATTATCTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATATATTTGACTAAATTAACTACCTGACCCATTATTATCTAGTT  500

seq1  ATAATGATTTATAATGAATTATTCTGAGAATATAATTTTATTCTGACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATTTATAATGAATTATTCTGAGAATATAATTTTATTCTGACATA  550

seq1  TACATTTGCACATACATATGCATATACATATACATTAGGTAAACTATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGCACATACATATGCATATACATATACATTAGGTAAACTATGAA  600

seq1  AATAGAATAAAACTACAGCTTACATGCAGAAAAACTAATTAGAAAGGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATAAAACTACAGCTTACATGCAGAAAAACTAATTAGAAAGGTCA  650

seq1  CTATTGGATGTTATTTCTTCATTCTATTATTTATTACTTAAGTATATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGATGTTATTTCTTCATTCTATTATTTATTACTTAAGTATATATT  700

seq1  CTATGCACCAGTACATGAAGCTGCACACTCACTTCTGCTCTTTCTTGTTT  750
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  CTATGCACCAGTTCATGAAGCTGCACACTCACTTCTGCTCTTTCTGGTTT  750

seq1  TTCTATAAATCCA-TTAAAACACATATTTTAAAAAATTGCTTCTGAAAGT  799
      ||||| ||||||| |||||||||||||||| |||||||||||||||||||
seq2  TTCTAAAAATCCATTTAAAACACATATTTT-AAAAATTGCTTCTGAAAGT  799

seq1  TTCATGTGTAAGTATTATATTTACATCATTTCTACTCCCCTTTTTCTCAT  849
      ||||||||||||||||||| |||||||| ||||||| ||||||||| || 
seq2  TTCATGTGTAAGTATTATA-TTACATCA-TTCTACT-CCCTTTTTCCCAA  846

seq1  ATCCCTGTCATGGGCTTGTTCATGCTTGCAATATTACACAGCTTATTATT  899
       |||||||||||||| || ||||||||||||||||||||| ||||| |||
seq2  TTCCCTGTCATGGGC-TGGTCATGCTTGCAATATTACACAACTTATAATT  895

seq1  CTTTAGCTATTATT-GTTAGGTGCATGTGTGTGTGTGTGTGTG  941
      ||||||| |||||| || ||||||||||||| ||||| |||||
seq2  CTTTAGC-ATTATTGGTAAGGTGCATGTGTGGGTGTGCGTGTG  937