BAC Information

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BAC

Clone NameB6Ng01-036P01
Chromosome2 (Build37)
Map Location 145,830,876 - 145,831,433
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc24a3, LOC627312, OTTMUSG00000015643, LOC433482, LOC100043810, Rin2, Nat5, Crnkl1, 4930529M08Rik, LOC100043563
Downstream geneInsm1, A230067G21Rik, LOC668918, Gm114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036P01.bB6Ng01-036P01.g
ACCDH864962DH864963
length799855
definitionDH864962|Mus musculus domesticus DNA, BAC clone: B6Ng01-036P01, 5' end.DH864963|Mus musculus domesticus DNA, BAC clone: B6Ng01-036P01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcggtgttctaaaggttccaaccgtgctgttacattattat
atgagctctgtccctttttaaaatgcaggcgcttagtgctatgaacttgc
ctcttagcaaagctctcacttgtcctataggtttggatatgttgtatatt
cattttattcaattcttaatttttgaatttgtaaaatttctgttgtttct
gttgttattgatatccagctttaatccatggtggtcaggagttatttcac
ttgtgtttcttgtatctgttgagacttgctttgtgtgtgagtatgtgagc
aatttgggagaaagttttatgagatgctgagaaaggcatagtcttccatg
ttttgggtgaaaatgttctgtagattctgtggtaggttcctttggttata
aacctattatctcatctattatctccagcatttttctgtctaggttttgc
ctgatgccctgtctatagagacagtgggggtattgaagttcctgctttag
tgtagaaggatgtgagattatgctgtcaatgctctttacaaacttgatgt
cctgttctactgaatagatttcctttatgattggaagtcttccaaatctt
tgttattttaatagaatttcttattacattcaagcttccaagttcctatc
tcccacctgttctatccattattttggccggatccctgttggaataagtt
caacaggctcttcatgatgttttagtaatcgtattttcgttagacggctg
ggaagtaattaatttgtcccttagtcgacctagctggattttagctttt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatttaacaagatgatcatgtggtttttgtcttt
gagtttgtttatgtaatggattacattgatggatttccgtatattaaacc
atccctgcatccgtggaataaaaccaacttggtcaggatggatgattgct
ttaatatgttcttggattcgggtagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaggaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggcttttttttggctgggagactattaataactgcttctatttc
tttaggtgatatgggactgtttagatggtcaacttgatcctgactcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggtttttc
cagttttgttgagtatagcttttttgtagaaggatctgatggtgttttgg
atttctttcaggatctgtttttatgtctcccttttcattttctgattttt
gttaattaggatttttgtccctgtgccctttagtgagtctagctaagggt
ttttcttttcttgttgatttttctcaaagaaccaactcctcgttggttaa
ttctttgatagttctcttgtttccactggtgattcacccctgagttgata
tttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_145830876_145831433
seq2: B6Ng01-036P01.g_362_920 (reverse)

seq1  GGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAA  50
      |||||| ||| |||||||||||| |||||  | |||||||||||| ||||
seq2  GGAAAT-ATC-AACTCAGGGGTG-AATCA--CCAGTGGAAACAAG-AGAA  44

seq1  CTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAG-AAAATCAA  99
      ||| |||||||||||||| |||||||||||||||||||||| ||||||||
seq2  CTA-TCAAAGAATTAACC-AACGAGGAGTTGGTTCTTTGAGAAAAATCAA  92

seq1  CAAG-ATAGATAAACCCTTAGCTAGACTTACTAAAGGGCACAGGGAC-AA  147
      |||| | ||| ||||||||||||||||| |||||||||||||||||| ||
seq2  CAAGAAAAGAAAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAA  142

seq1  AATCCTAATTAAC-AAAATCAG-AAATGAAAAGGGAGACATAACAACAGA  195
      ||||||||||||| |||||||| |||||||||||||||||||| ||||||
seq2  AATCCTAATTAACAAAAATCAGAAAATGAAAAGGGAGACATAAAAACAGA  192

seq1  TCCTG-AAGAAATCCAAAACACCATCAGATCCTTCTAC-AAAAGGCTATA  243
      ||||| |||||||||||||||||||||||||||||||| |||| ||||||
seq2  TCCTGAAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAAAGCTATA  242

seq1  CTCAACAAAACTGG-AAAACCTGGACGAAATGGACAAATTTCTGGACAGA  292
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCAACAAAACTGGAAAAACCTGGACGAAATGGACAAATTTCTGGACAGA  292

seq1  TACCAGGTACCAAAGTTGAGTCAGGATCAAGTTGACCATCTAAACAGTCC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGTACCAAAGTTGAGTCAGGATCAAGTTGACCATCTAAACAGTCC  342

seq1  CATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCC-AAA  391
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAA  392

seq1  AAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAA  442

seq1  AGAACATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAG  491
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAG  492

seq1  AAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCT  541
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCT  542

seq1  AAACCACAGAAAGACTC  558
      ||||||||||||||| |
seq2  AAACCACAGAAAGACCC  559