BAC Information

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BAC

Clone NameB6Ng01-037H06
Chromosome2 (Build37)
Map Location 79,671,168 - 79,671,658
singlet/doubletsinglet
Overlap genenone
Upstream gene4930401B11Rik, Ube2e3, LOC100040526, Itga4, Cerkl, Neurod1, Ssfa2, Ppp1r1c
Downstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037H06.bB6Ng01-037H06.g
ACCDH865309DH865310
length717646
definitionDH865309|Mus musculus domesticus DNA, BAC clone: B6Ng01-037H06, 5' end.DH865310|Mus musculus domesticus DNA, BAC clone: B6Ng01-037H06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgttttatttctataccacattttttgattgggttatatgggt
tttgatgggtagcttcttgagttctttatatattttggatattagctatc
agatgtggggttagtaaagatatttttcccaatctgtagtttgttgattt
gccttattgactatatcctttgcattatagaaggtttccactttcatgag
atcacatttatcagttctttgtcttaaagaataagccattggagttcttt
ttaggaaatacccccctgtgtcaatgagttcgaggctctttcccaatttc
tcttctattaaattcagtgtatctggttttatgttgaggtccattatcca
cttggacttgtgcattgtgcaaggtgacaaatatggatctgttttcattt
tttttctacacacagccagccagttagaccagcaccatttactgaaaatg
ctttctgttttccattgtatatctttgtcaaagatcaagtgtcaataagt
gtgtgattttatttctggatattcagttctattccactgatcaatgtata
tgtctctgtaccaacaccttgcagctgtactgggtgagggaaaagtaatg
aagcccatatgaccagaagaagactgaaaccttaggaggtaggaggttgg
ggggcggtgatgctccagaattcaccagagagctgagggttgagagatgc
taaggacccaaagggag
gaattcactttgctcccagagcttagtcttcaaagctcctgccaggacgg
cccagtaaggcccacttacagcattcaaacacttttctaggccaatatcc
ccaaatcttacatattgctaatagaatcagttttataaattctgttacat
cagtgtgccactcactgataccaaatctctattagttacttctctattgt
gtggtaaaacatttctactggagcaacttataacagaaagtgtttaatct
ggttcacagattgagacagagttaatgacagtagagctaaagaacagctg
aaggaggacatcttcatccatatccatgatgcagagaaagagaacgtttt
agaaattctaggaggtgttttgttttattttgttttttgtttgtttgttt
gttttgttttgtttttgagattttttgttttcttttaattttattttatt
tctaaattatttttacactccatattccattccccacccctcccagccca
ccctccaacttctccaggtcccacacgctgtctgcacatggttgctccac
cctccaccccatctgacttcttaactccctggggcctccagtctctttga
gggttatgtgcatcaactctgaatgaacatagacttgatgtcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_79671168_79671658
seq2: B6Ng01-037H06.g_491_578

seq1  TTTTGTTTTCTTTTAATTTAGTTTTATTTGTAATTCATTTTTTATACTCT  50
                                                        
seq2  --------------------------------------------------  0

seq1  GTACTGGCTGGTTTTGGGTGTCAACTTGACACAGGCTGGAGTTATCACAG  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAGGAGCTTCAGTTGGGGAGATGCCTCCATGAGATCCAGCTGTAAGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  CATTTTCTCGATTAGTGATCAAGGGGGAAAAGCCCCTTGTGCATGGGGCC  200
                                                        
seq2  --------------------------------------------------  0

seq1  ATCTCTGGGCTGGTAGTCTTGGGCTCTATAAGAGAGCAGGCTGAGCAAGC  250
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGAGAAGCAAGCCAGTAAAGAACATTCCTCCATGGCCCCTGCATCAGC  300
                                                        
seq2  --------------------------------------------------  0

seq1  TCCTGCTTTCTGATCTGCTTGAGTTCCAGTCCTGTATCCTTTGGTGATGA  350
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGCAGTATGGAAATGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGC  400
                                                    ||| 
seq2  --------------------------------------------TTTTGT  6

seq1  TTCTTGGTCATGATGTTTGTGTAGGAATAGAAACCCTGACTAAGACACAC  450
      ||  |  | ||  | |||   |     |  |||   |   |     ||||
seq2  TTTCTTTTAATTTTATTTTATT-----TCTAAATTATTTTT-----ACAC  46

seq1  TCCATATTCCATTCCCCACCCCTCTCA-CCCACCCTCCAACT  491
      |||||||||||||||||||||||| || ||||||||||||||
seq2  TCCATATTCCATTCCCCACCCCTCCCAGCCCACCCTCCAACT  88