BAC Information

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BAC

Clone NameB6Ng01-037I09
Chromosome2 (Build37)
Map Location 145,562,366 - 145,700,509
singlet/doubletdoublet
Overlap geneLOC100043810, Rin2
Upstream geneDtd1, 1700010M22Rik, Slc24a3, LOC627312, OTTMUSG00000015643, LOC433482
Downstream geneNat5, Crnkl1, 4930529M08Rik, LOC100043563, Insm1, A230067G21Rik, LOC668918, Gm114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037I09.bB6Ng01-037I09.g
ACCDH865361DH865362
length262904
definitionDH865361|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I09, 5' end.DH865362|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,700,248 - 145,700,509)(145,562,366 - 145,563,268)
sequence
gaattctctgcttcttcagagccaactttttcatctcatgtgctacaatt
ctcaccatcccatccgactcagtatcatagtaactgtctgatataggaca
caatgtggttccgttctgcaagtgtgcagatccacccacttctaagattg
gaaagagttgggttatttctctggcctctgaagttcttgatattgggtca
gatcatactgaattcaaattcctatctattattagaagtctggggtggga
tggggtgggatg
gaattccaagaggtcacacagagatttagagactgtcattctggcctctc
tgcaaacccatagaggagaatgtcagaagaaccgagtgggttgcatctta
ctgtcccatagggaagtggtctccagatggtggtttatagaaggcagatg
tctggatcaaccacattgaggaactagaaggaggtaaatggctagagttt
gtgttgaaggtgacagagccctgcttctggtagaggaaaaccaagcttat
cttcaaaatgaatgcagcagcaatgtaaatttctaaggattcactccaca
aggactagacctggcttatttctctcctgcagaatcttaaaggatgttta
caggtgaggtagggttatggtctcccaaatcttcaagcctgtgaaatcat
tctccgggctatccacccttaggatagacccatgcatattttctttgtag
gtggctcagtggtctgagcttcctgaagacatggtagactgggaacgctg
ttgggttgttgtggcagaagttgacgggcttattaacgcttggagtgaga
cctgtaaagatttgaccattcttcagtgggttctcaaagcctataaatga
gattttgttatgtttgtaaatgaatcccccaaatggcgagagttcccagg
aactatacaatggaactgatgaaagatcccatgttctctggagagcttac
agaactaaggatgcaaaagccagagcagtgtacaacttgatcctgtttac
agctctgcggggccttcttcactgaccctgagagacttactcaacagtgc
agcggagcctgctgactcacacttgttaagccctacactttgtaatcccg
atggtaaagcaccaggacatcgaatttggatgggcaacagccacttttta
gttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_145700248_145700509
seq2: B6Ng01-037I09.b_32_293 (reverse)

seq1  CATCCCACCCCATCCCACCCCAGACTTCTAATAATAGATAGGAATTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACCCCATCCCACCCCAGACTTCTAATAATAGATAGGAATTTGAA  50

seq1  TTCAGTATGATCTGACCCAATATCAAGAACTTCAGAGGCCAGAGAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATGATCTGACCCAATATCAAGAACTTCAGAGGCCAGAGAAATAA  100

seq1  CCCAACTCTTTCCAATCTTAGAAGTGGGTGGATCTGCACACTTGCAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCTTTCCAATCTTAGAAGTGGGTGGATCTGCACACTTGCAGAAC  150

seq1  GGAACCACATTGTGTCCTATATCAGACAGTTACTATGATACTGAGTCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCACATTGTGTCCTATATCAGACAGTTACTATGATACTGAGTCGGA  200

seq1  TGGGATGGTGAGAATTGTAGCACATGAGATGAAAAAGTTGGCTCTGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGTGAGAATTGTAGCACATGAGATGAAAAAGTTGGCTCTGAAGA  250

seq1  AGCAGAGAATTC  262
      ||||||||||||
seq2  AGCAGAGAATTC  262

seq1: chr2_145562366_145563268
seq2: B6Ng01-037I09.g_72_974

seq1  GAATTCCAAGAGGTCACACAGAGATTTAGAGACTGTCATTCTGGCCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAGGTCACACAGAGATTTAGAGACTGTCATTCTGGCCTCTC  50

seq1  TGCAAACCCATAGAGGAGAATGTCAGAAGAACCGAGTGGGTTGCATCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCCATAGAGGAGAATGTCAGAAGAACCGAGTGGGTTGCATCTTA  100

seq1  CTGTCCCATAGGGAAGTGGTCTCCAGATGGTGGTTTATAGAAGGCAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCATAGGGAAGTGGTCTCCAGATGGTGGTTTATAGAAGGCAGATG  150

seq1  TCTGGATCAACCACATTGAGGAACTAGAAGGAGGTAAATGGCTAGAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCAACCACATTGAGGAACTAGAAGGAGGTAAATGGCTAGAGTTT  200

seq1  GTGTTGAAGGTGACAGAGCCCTGCTTCTGGTAGAGGAAAACCAAGCTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAAGGTGACAGAGCCCTGCTTCTGGTAGAGGAAAACCAAGCTTAT  250

seq1  CTTCAAAATGAATGCAGCAGCAATGTAAATTTCTAAGGATTCACTCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAATGAATGCAGCAGCAATGTAAATTTCTAAGGATTCACTCCACA  300

seq1  AGGACTAGACCTGGCTTATTTCTCTCCTGCAGAATCTTAAAGGATGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAGACCTGGCTTATTTCTCTCCTGCAGAATCTTAAAGGATGTTTA  350

seq1  CAGGTGAGGTAGGGTTATGGTCTCCCAAATCTTCAAGCCTGTGAAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGTAGGGTTATGGTCTCCCAAATCTTCAAGCCTGTGAAATCAT  400

seq1  TCTCCGGGCTATCCACCCTTAGGATAGACCCATGCATATTTTCTTTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGGGCTATCCACCCTTAGGATAGACCCATGCATATTTTCTTTGTAG  450

seq1  GTGGCTCAGTGGTCTGAGCTTCCTGAAGACATGGTAGACTGGGAACGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCAGTGGTCTGAGCTTCCTGAAGACATGGTAGACTGGGAACGCTG  500

seq1  TTGGGTTGTTGTGGCAGAAGTTGACGGGCTTATTAACGCTTGGAGTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGTTGTGGCAGAAGTTGACGGGCTTATTAACGCTTGGAGTGAGA  550

seq1  CCTGTAAAGATTTGACCATTCTTCAGTGGGTTCTCAAAGCCTATAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAAGATTTGACCATTCTTCAGTGGGTTCTCAAAGCCTATAAATGA  600

seq1  GATTTTGTTATGTTTGTAAATGAATCCCCCAAATGGCGAGAGTTCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTTATGTTTGTAAATGAATCCCCCAAATGGCGAGAGTTCCCAGG  650

seq1  AACTATACAATGGAACTGATGAAAGATCCCATGTTCATCTGGAGAGC-TA  699
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  AACTATACAATGGAACTGATGAAAGATCCCATGTTC-TCTGGAGAGCTTA  699

seq1  CAGAACTAAGGAATGCAAAAGCCAGAGCAGTG-ACAACTTGATCCTGTTT  748
      ||||||||||| |||||||||||||||||||| |||||||||||||| ||
seq2  CAGAACTAAGG-ATGCAAAAGCCAGAGCAGTGTACAACTTGATCCTG-TT  747

seq1  TACAGCTCTGCGGGGCC-TCTTCACTGACCCTGAGAGACTTACTCAACAG  797
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TACAGCTCTGCGGGGCCTTCTTCACTGACCCTGAGAGACTTACTCAACAG  797

seq1  TGCAGCAGGAGCCTGCTGACTCACAC-TGGTAAGCCCTACACATTTGTAA  846
      |||||| ||||||||||||||||||| || |||||||||||| ||||| |
seq2  TGCAGC-GGAGCCTGCTGACTCACACTTGTTAAGCCCTACAC-TTTGT-A  844

seq1  ATCCCGATGGTAAAGCACCAAGACATCG-ATTTGGATGGGC-ACAGCCAC  894
      |||||||||||||||||||| ||||||| |||||||||||| ||||||||
seq2  ATCCCGATGGTAAAGCACCAGGACATCGAATTTGGATGGGCAACAGCCAC  894

seq1  ATTTTAGTT  903
       ||||||||
seq2  TTTTTAGTT  903