BAC Information

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BAC

Clone NameB6Ng01-037K13
Chromosome2 (Build37)
Map Location 93,803,405 - 93,954,460
singlet/doubletdoublet
Overlap geneAlkbh3, Hsd17b12
Upstream geneLOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4, Ext2, 2610203E10Rik, Gm1967, Gm1335, LOC620695
Downstream geneE530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037K13.bB6Ng01-037K13.g
ACCDH865452DH865453
length955489
definitionDH865452|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K13, 5' end.DH865453|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,953,497 - 93,954,460)(93,803,405 - 93,803,899)
sequence
gaattccttttctttggaagcaaggaaagctaccttagggcagtcttagg
aagtatgccagccatgtagagtttgagtgaatctggagatacgagttgat
gatatttgtaaatttggttaacttacagtttgagatgacatgaattttgg
gccaaatgtgattctgtttaagtattttcatggaaaaaagacattcattg
acttgacctttattaaaatagaagttatagcaccagaccataagattata
atatatatatatatatatattgcagggaatttagaaatacttttttgaga
taatgcttcatatattttaggctggcctagtgctcccaggatagttaagg
gtgctcctcctgtcaccatctcatgaatgctaggattactgttggtctca
cacccagtgaaagtggttctaggaactgaacccaggcccaagtacatgct
aggcaaatactcttccaactgagctacactcctagtcctatgcatttgaa
tcttctgtttgggaggatgatatttttatgagtgtgttagttccagaaga
atagagggaccaggaccatgtattgacaatgacagacaaaactgtgtttt
ctttggttatactttgaagctctcttattgaatgcctatagtaagcagtt
gagacacagtgatgaacaaatagtccttgtgtgttctagtgaaagaggca
ttgaaaacaaatgatttaacaaccaccaccacaacaacaaaaaacctaaa
taaataaacaccaaacggataataagtacctgtactaagtgcctgagtat
ctaaggtactattaagagaagccagaaaattactttgtatggtgagtttg
tgactgtcaggatacctgattcccctagactaaatgcattaatgactgcg
atgccttatgatggaggcatccctgggcccttctggggtatatgatacag
gattt
ctgatgcccactaggctgagtttgtggagggggcattatccagttttaca
cgtggccttgcctggaggccctgggttgggggatggtcattaaagaggat
gcaggatagtcatcttctggtcagggctgcagccatgagtatacagaggg
ccacagacatgtgctcagttgagcgctggctatctgcagactctgggctc
agtgtgtaatctcactaaaataccccctggactcctctgcagggtcctaa
caccatacctgctttacaccagtgaccagtggagtttggtgttttgccat
ggccacccaagtcctgaggcaggaacccaaagtcaggtctgctggacctt
gctgcagcccattgtaccctgtagtctcccttctgacggaaccggaacca
gaccagaagtcagatgcctggatggctgaatccgctcattttctcacaac
ctgtggccttgaacctgtcatacttctcagtagccccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93953497_93954460
seq2: B6Ng01-037K13.b_42_995 (reverse)

seq1  AATCCTGCTATCAATATACCCCCAGAAGGGCCCAGGGGATGCCTCCATCA  50
      ||||||| |||| ||||| ||||||||||||||| |||||||||||||||
seq2  AATCCTG-TATC-ATATA-CCCCAGAAGGGCCCA-GGGATGCCTCCATCA  46

seq1  CTAAGGCATCGCTGTCATTTACTGCATGTTAGTCTA-GGGAATCAGGTAT  99
       ||||||||||| |||| ||| ||||| |||||||| |||||||||||||
seq2  -TAAGGCATCGCAGTCA-TTAATGCAT-TTAGTCTAGGGGAATCAGGTAT  93

seq1  CCTGACAGTCACAAAACTCACCATACAAAGTAACTTTTCTGGCCTTCTCT  149
      |||||||||||| |||||||||||||||||||| |||||||| |||||||
seq2  CCTGACAGTCAC-AAACTCACCATACAAAGTAA-TTTTCTGG-CTTCTCT  140

seq1  TACTAGTACCTTTGCTTTCTCAGGCACTTAGTACAGGTTACTTACTTATC  199
      || ||||||||| |  | ||||||||||||||||||| |||||| |||||
seq2  TAATAGTACCTTAG-ATACTCAGGCACTTAGTACAGG-TACTTA-TTATC  187

seq1  CGTTTGGTGTTTATTTATTTAGGTTTTTTGTTGTTGTGGTGGTGGTTGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGGTGTTTATTTATTTAGGTTTTTTGTTGTTGTGGTGGTGGTTGTT  237

seq1  AAATCATTTGTTTTCAATGCCTCTTTCACTAGAACACACAAGGACTATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTGTTTTCAATGCCTCTTTCACTAGAACACACAAGGACTATTT  287

seq1  GTTCATCACTGTGTCTCAACTGCTTACTATAGGCATTCAATAAGAGAGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCACTGTGTCTCAACTGCTTACTATAGGCATTCAATAAGAGAGCT  337

seq1  TCAAAGTATAACCAAAG-AAACACAG-TTTGTCTGTCATTGTCAATACAT  397
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  TCAAAGTATAACCAAAGAAAACACAGTTTTGTCTGTCATTGTCAATACAT  387

seq1  GGTCCTGGTCCCTCTATTCTTCTGGAACTAACACACTCATAAAAATATCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGTCCCTCTATTCTTCTGGAACTAACACACTCATAAAAATATCA  437

seq1  TCCTCCCAAACAGAAGATTCAAATGCATAGGACTAGGAGTGTAGCTCAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCAAACAGAAGATTCAAATGCATAGGACTAGGAGTGTAGCTCAGT  487

seq1  TGGAAGAGTATTTGCCTAGCATGTACTTGGGCCTGGGTTCAGTTCCTAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGTATTTGCCTAGCATGTACTTGGGCCTGGGTTCAGTTCCTAGA  537

seq1  ACCACTTTCACTGGGTGTGAGACCAACAGTAATCCTAGCATTCATGAGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTTCACTGGGTGTGAGACCAACAGTAATCCTAGCATTCATGAGAT  587

seq1  GGTGACAGGAGGAGCACCCTTAACTATCCTGGGAGCACTAGGCCAGCCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGGAGGAGCACCCTTAACTATCCTGGGAGCACTAGGCCAGCCTA  637

seq1  AAATATATGAAGCATTATCTCAAAAAAGTATTTCTAAATTCCCTGCAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATGAAGCATTATCTCAAAAAAGTATTTCTAAATTCCCTGCAATA  687

seq1  TATATATATATATATATTATAATCTTATGGTCTGGTGCTATAACTTCTAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATTATAATCTTATGGTCTGGTGCTATAACTTCTAT  737

seq1  TTTAATAAAGGTCAAGTCAATGAATGTCTTTTTTCCATGAAAATACTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAAGGTCAAGTCAATGAATGTCTTTTTTCCATGAAAATACTTAA  787

seq1  ACAGAATCACATTTGGCCCAAAATTCATGTCATCTCAAACTGTAAGTTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCACATTTGGCCCAAAATTCATGTCATCTCAAACTGTAAGTTAA  837

seq1  CCAAATTTACAAATATCATCAACTCGTATCTCCAGATTCACTCAAACTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTACAAATATCATCAACTCGTATCTCCAGATTCACTCAAACTCT  887

seq1  ACATGGCTGGCATACTTCCTAAGACTGCCCTAAGGTAGCTTTCCTTGCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCTGGCATACTTCCTAAGACTGCCCTAAGGTAGCTTTCCTTGCTT  937

seq1  CCAAAGAAAAGGAATTC  964
      |||||||||||||||||
seq2  CCAAAGAAAAGGAATTC  954

seq1: chr2_93803405_93803899
seq2: B6Ng01-037K13.g_70_564

seq1  GAATTCCTGATGCCCACTAGGCTGAGTTTGTGGAGGGGGCATTATCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATGCCCACTAGGCTGAGTTTGTGGAGGGGGCATTATCCAGT  50

seq1  TTTACACGTGGCCTTGCCTGGAGGCCCTGGGTTGGGGGATGGTCATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACGTGGCCTTGCCTGGAGGCCCTGGGTTGGGGGATGGTCATTAAA  100

seq1  GAGGATGCAGGATAGTCATCTTCTGGTCAGGGCTGCAGCCATGAGTATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGCAGGATAGTCATCTTCTGGTCAGGGCTGCAGCCATGAGTATAC  150

seq1  AGAGGGCCACAGACATGTGCTCAGTTGAGCGCTGGCTATCTGCAGACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCCACAGACATGTGCTCAGTTGAGCGCTGGCTATCTGCAGACTCT  200

seq1  GGGCTCAGTGTGTAATCTCACTAAAATACCCCCTGGACTCCTCTGCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAGTGTGTAATCTCACTAAAATACCCCCTGGACTCCTCTGCAGGG  250

seq1  TCCTAACACCATACCTGCTTTACACCAGTGACCAGTGGAGTTTGGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACACCATACCTGCTTTACACCAGTGACCAGTGGAGTTTGGTGTTT  300

seq1  TGCCATGGCCACCCAAGTCCTGAGGCAGGAACCCAAAGTCAGGTCTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGGCCACCCAAGTCCTGAGGCAGGAACCCAAAGTCAGGTCTGCTG  350

seq1  GACCTTGCTGCAGCCCATTGTACCCTGTAGTCTCCCTTCTGACGGAACCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCTGCAGCCCATTGTACCCTGTAGTCTCCCTTCTGACGGAACCG  400

seq1  GAACCAGACCAGAAGTCAGATGCCTGGATGGCTGAATCCGCTCAGTTTCT  450
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAACCAGACCAGAAGTCAGATGCCTGGATGGCTGAATCCGCTCATTTTCT  450

seq1  CACAACCTGTGGCCTTGAACCTGTCATACTTCTCAGTAGCCCCGA  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCTGTGGCCTTGAACCTGTCATACTTCTCAGTAGCCCCGA  495