BAC Information

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BAC

Clone NameB6Ng01-037L06
Chromosome2 (Build37)
Map Location 113,225,361 - 113,226,148
singlet/doubletsinglet
Overlap geneFmn1
Upstream gene2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3, 4930563P21Rik
Downstream geneGrem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037L06.bB6Ng01-037L06.g
ACCDH865482DH865483
length717789
definitionDH865482|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L06, 5' end.DH865483|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccat
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttccttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
attcttaggagtccagt
gaattcacggcttcatgtacaaaagaattattttcattgattttaggggt
gccaaatggcagtggtggggagcatgtagctgagaaaatctgtttatctc
acggtcaggaaccaaaggaaagtaaggagaagacaagagactcagaggca
agccttcaagggctgcctccaaagaccgaagggcatcctgtctcacctta
aaggctcctttgcctcccagcggcaccattctgaggaccgaacttttaat
acatgagctttagggaaacatttgcatccaatctgtatcactccagaagg
caggactctgatgcatttattgaactagttaaactagacacagcttaggg
aagagagagtacaaattgttcttgcataccaaaaaaaaaaaaaaaaagag
tcatagcatccacatgaaatgtataaacttggtctgacacatggcagaaa
taacccatttctaaaaatacagatttgagacaatcacataaattgagcat
gacctataaattagtatcagataatactaaggacttaatctaattaagag
aggattttgagtctcagaagagtccttggaattttaaacagtgttgagac
tatgaaagactagagggacttttgaagttgtactaaatgcattttacact
atgatgtgaccacaaaggagtggaatgtggtgggtttaaatgagaatgtt
cgctcataggcttatatttttgaatatttggtctccggtgggtaaaactg
tttgggaaggactaggaagaatggtcttgttggaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_113225361_113226148
seq2: B6Ng01-037L06.g_71_859

seq1  GAATTCACGGCTTCATGTACAAAAGAATTATTTTCATTGATTTTAGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGGCTTCATGTACAAAAGAATTATTTTCATTGATTTTAGGGGT  50

seq1  GCCAAATGGCAGTGGTGGGGAGCATGTAGCTGAGAAAATCTGTTTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGGCAGTGGTGGGGAGCATGTAGCTGAGAAAATCTGTTTATCTC  100

seq1  ACGGTCAGGAACCAAAGGAAAGTAAGGAGAAGACAAGAGACTCAGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCAGGAACCAAAGGAAAGTAAGGAGAAGACAAGAGACTCAGAGGCA  150

seq1  AGCCTTCAAGGGCTGCCTCCAAAGACCGAAGGGCATCCTGTCTCACCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAAGGGCTGCCTCCAAAGACCGAAGGGCATCCTGTCTCACCTTA  200

seq1  AAGGCTCCTTTGCCTCCCAGCGGCACCATTCTGAGGACCGAACTTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCCTTTGCCTCCCAGCGGCACCATTCTGAGGACCGAACTTTTAAT  250

seq1  ACATGAGCTTTAGGGAAACATTTGCATCCAATCTGTATCACTCCAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGCTTTAGGGAAACATTTGCATCCAATCTGTATCACTCCAGAAGG  300

seq1  CAGGACTCTGATGCATTTATTGAACTAGTTAAACTAGACACAGCTTAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTCTGATGCATTTATTGAACTAGTTAAACTAGACACAGCTTAGGG  350

seq1  AAGAGAGAGTACAAATTGTTCTTGCATACCAAAAAAAAAAAAAAAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGTACAAATTGTTCTTGCATACCAAAAAAAAAAAAAAAAAGAG  400

seq1  TCATAGCATCCACATGAAATGTATAAACTTGGTCTGACACATGGCAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCATCCACATGAAATGTATAAACTTGGTCTGACACATGGCAGAAA  450

seq1  TAACCCATTTCTAAAAATACAGATTTGAGACAATCACATAAATTGAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCATTTCTAAAAATACAGATTTGAGACAATCACATAAATTGAGCAT  500

seq1  GACCTATAAATTAGTATCAGATAATACTAAGGACTTAATCTAATTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATAAATTAGTATCAGATAATACTAAGGACTTAATCTAATTAAGAG  550

seq1  AGGATTTTGAGTCTCAGAAGAGTCCTTGGAATTTTAAACAGTGTTGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTGAGTCTCAGAAGAGTCCTTGGAATTTTAAACAGTGTTGAGAC  600

seq1  TATGAAAGACTAGAGGGACTTTTGAAGTTGTACTAAATGCATTTTACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGACTAGAGGGACTTTTGAAGTTGTACTAAATGCATTTTACACT  650

seq1  ATGATGTGACCACAAAGGAGTGGAATGTGGT-GGTTTAAATGAGAATGTT  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGATGTGACCACAAAGGAGTGGAATGTGGTGGGTTTAAATGAGAATGTT  700

seq1  CGCTCATAGGCTTATATTTTTGAATATTTGGTCTCCGGTTGGTGAAACTG  749
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CGCTCATAGGCTTATATTTTTGAATATTTGGTCTCCGGTGGGTAAAACTG  750

seq1  TTTGGGAAGGACTAGGAGGAATGGTCTTGTTGGAGGGGG  788
      ||||||||||||||||| |||||||||||||||| ||||
seq2  TTTGGGAAGGACTAGGAAGAATGGTCTTGTTGGAAGGGG  789