BAC Information

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BAC

Clone NameB6Ng01-037L24
Chromosome2 (Build37)4 (Build37)
Map Location 136,110,604 - 136,111,14637,541,703 - 37,541,776
singlet/doubletsingletsinglet
Overlap genePak7
Upstream genePlcb1, LOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik
Downstream geneLOC668910, LOC100043492, BC034902, Ankrd5, Snap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037L24.bB6Ng01-037L24.g
ACCDH865518DH865519
length833819
definitionDH865518|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L24, 5' end.DH865519|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(136,110,604 - 136,111,146)(37,541,703 - 37,541,776)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttggcttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccatttctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagaggttttgctatcgtaggttttttgttattccagatg
aatttgcaaattgatccttctaattcgttgaagaattgagttggaatttg
atggggattgcattgaatctgtagattgctttttggcaagatagccattt
tttacaatgttgatcctgccaatccatgagcat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaaccctgagag
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgagcacgtggagaaagaggtacactccctcactgttggag
ggattacaagcttgtataaccacttcggtaatcagtctggtggtttctca
gaaaattggacatggtactaccagaggatccctcaatacctctgctgggc
atacatccagaagatgttccaattagtaagaaagaaatatgctccactat
gttcatagtagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaattgtggtacatttatacaatg
gagtactactcagctattaaaaagaatggatttatgaaattcctaggcaa
atggttggacttggagggcattatgctgagtgaggtaacccaatcactaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagttacaatttgcaaaaacacatgaaaactc
aagaagaacgaagaccttaagtatgggacaccttgccccttcttagaatt
gggaataaaacacccatggaaaggagttacagagacaaagttttggagct
gagacaaaaggatggaccatctagagactgccttatccagggatccatcc
cattattcagcctcctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136110604_136111146
seq2: B6Ng01-037L24.b_336_879 (reverse)

seq1  TGCTCATGGATTGGCAGGATCAACATTGT-AAAAATGGCTATCTTGCC-A  48
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  TGCTCATGGATTGGCAGGATCAACATTGTAAAAAATGGCTATCTTGCCAA  50

seq1  AAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATT  98
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAGCAATCTACAGATTCAATGCAATCCCCATC-AAATTCCAACTCAATT  99

seq1  CTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAA  148
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCAACGAATTAGAAGGATCAATTTGCAAATTCATCTGGAATAACAAAA  149

seq1  AACCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGA  198
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  AACCTACGATAGCAAAACCTCTTCTCAAGGATAAAAGAACCTCTGGTGGA  199

seq1  ATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGGTAAAAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGGTAAAAAC  249

seq1  TGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATATAATTG  298
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTG  299

seq1  AAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAG  349

seq1  GGAGCCAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTG  398
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTG  399

seq1  CTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACT  448
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCATACT  449

seq1  TATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATA  499

seq1  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGC  543
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGC  544

seq1: chr4_37541703_37541776
seq2: B6Ng01-037L24.g_830_890 (reverse)

seq1  GTTTGGAGGCT-AATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGA  49
      ||| ||||||| ||| |||||||||||||||||||| |||          
seq2  GTTAGGAGGCTGAATAATGGGATGGATCCCTGGATAAGGC----------  40

seq1  TGGGAGTCTCTAGATGGTCCATCCT  74
          |||||||||||||||||||||
seq2  ----AGTCTCTAGATGGTCCATCCT  61