BAC Information

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BAC

Clone NameB6Ng01-038C05
Chromosome2 (Build37)
Map Location 85,575,023 - 85,576,182
singlet/doubletsinglet
Overlap genenone
Upstream geneYpel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009
Downstream geneOlfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038C05.bB6Ng01-038C05.g
ACCDH865796DH865797
length1,1491,024
definitionDH865796|Mus musculus domesticus DNA, BAC clone: B6Ng01-038C05, 5' end.DH865797|Mus musculus domesticus DNA, BAC clone: B6Ng01-038C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgccatcttgttgtgatgctctggtcatcaacttaatccatgt
tatagacaagaagttgcatcttccaatacatgagttattttgctctaaaa
acttccagagagttaacacgtctggttctctgtaacaagaatctcctatt
ttgtaccctttattatgttgtaaaatctgcatgtgtttcagattgaaatt
tggtctgtataaccccagaaccgtaaagccccctgcttttgttctctgcc
ctaaagacctcattattagcaagaaagtactttatgaatatttattgagt
tgttactaattagttaacattaagaaaatcaaaaaagcaaacagattaaa
ttctgtgatcagtgctaatcattttattggtgtccatcttataaatgtat
taagatacatgcttgctaaaaaaaaagttatagaagtaatcatggataca
gtcaaagacctttgctgttaaaggagatggggtataaggtatgtacttat
agtccatattgaatatttgtttacttatcttatcaatatgtgtactatga
gaatgtattttattatattttacttttaatgttttaaaatgaaatagaat
tagaccacttccctcctccttttatatcctccggttcctcccacctattc
tccctcaaatccctccatgctgccctcactcctccaagtttatatcgttt
ttattattattatacttgtatacactgtgtgtatgtatgtgtgcatgcat
gtgagtgcacacgtgtgcatgcctccatgtaaatcaaatatgaatttcac
cttctgagtctgtttttgtttttatgtgtcaatatggctgcccatttttc
attaggacaatcaataactgggcttctccttgggatagttaattctactt
ctcatagcagtcactaattattcatattatttgtctaggggtgggacaga
ggaacttttccccctccatattacataatgttgatattgccattgttcca
tcttgtttatgaaaacatttctaggagaactgtttcatggcagacatcat
ggaattctggcttctacaaccttttgcagtctctttaaatggttccctga
agcaagagctgggatggaaatattcattgtatctagtgtaatttctgtg
gaattcctgacctaagacttttaacataaagggctgttgtattttgtgaa
agtctttttcagcatttagtgagaagtcatgttattttttcccttgagtt
tgtttatatagtgtattgcactggaggattttctcatattgaactatccc
tgctgggataatgcctacttggttatggtaaatgatgtgttcttggtttt
ggtttgtaagaattactcaatagtatttttgcattgatattcataagaga
aactggtctgaagttctctttctttgttggatgtttgtatggttttgata
tcagagtaactgtggcttcatagaatgacctaggtagtgttcattctgtt
tgtattttgtggaatagtttgagtagtgttggtagtagatcttctttgaa
agtctggtagaatttggcactaaaaccatctggccctgggatgtttttgc
ttgggaggtttttaatgactgcttctatttccttaggtagatgggacaat
ttagatagtttatctattttgatttaactttggtatatgctatttgttta
gaaaaatcatgcattttgtctagatttcccatttttttcaagtatacact
tttgtagaaatatctgatcttttaaaatatcctgtttctgttgttatgtc
tctcttttcacttctgatattgttaatttggatactttctctgtaccttt
tagttagtttggctaaagatttatctatcttcatgattttcttaatgaac
tagctcttcgttttgttgactcttttgtattgttctctttgtttctaatt
agctgatttcatcccccagtttgactattttctgccatctactcctctga
tgtctttgcttcctttgttctagagctttcaagtgtgcattaagtgctag
tgtagatctctccaatttcttatggagacacttagtactgtgattttctt
tacatacttcatgtgtcaaagttgggagtgtgcctcttttatgaatcaaa
aggcttaattgttatgtccctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85575023_85576182
seq2: B6Ng01-038C05.b_46_1194 (reverse)

seq1  CACAGAAAATAACAACTAGATACAATGGATATATCTCCATCACAGCTCTT  50
      |||||||| ||   |||||||||||||   |||| |||||| ||||||||
seq2  CACAGAAATTA--CACTAGATACAATG--AATATTTCCATCCCAGCTCTT  46

seq1  GC-TCAGGGAACATTTTAAAGAAGACTGCAAAAAGGTTGTAAGAGCCAGA  99
      || |||||||||  ||||||| ||||||| |||||||||||  |||||||
seq2  GCTTCAGGGAACCATTTAAAG-AGACTGC-AAAAGGTTGTAGAAGCCAGA  94

seq1  ATACCATGATGTCTGCCATGAAACAGTTTCTCCTAGAAATGTTTTCATAA  149
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTCCATGATGTCTGCCATGAAACAG-TTCTCCTAGAAATGTTTTCATAA  143

seq1  ACAAGATTGGAACAATGGCAATATCAACAATTATGTTAATATGGAAGGGG  199
      |||||| ||||||||||||||||||||| |||||| |||||||| |||||
seq2  ACAAGA-TGGAACAATGGCAATATCAAC-ATTATG-TAATATGG-AGGGG  189

seq1  GAAAAGTTCCTCTTGTCCCACCCCTAGACAAATAATATGAATAATTAGTG  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTCCTC-TGTCCCACCCCTAGACAAATAATATGAATAATTAGTG  238

seq1  ACTGCTATGAGAAGTAGAATTAACTATCCCAAGGAGAAGCCCAGTTATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATGAGAAGTAGAATTAACTATCCCAAGGAGAAGCCCAGTTATTG  288

seq1  ATTGTCCTAATGAAAAATGGGCAGCCATATTGACACATAAAAACAAAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCTAATGAAAAATGGGCAGCCATATTGACACATAAAAACAAAAAC  338

seq1  AGACTCAGAAGGTGAAATTCATATTTGATTTACATGGAGGCATGCACACG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGAAGGTGAAATTCATATTTGATTTACATGGAGGCATGCACACG  388

seq1  TGTGCACTCACATGCATGCACACATACATACACACAGTGTATACAAGTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACTCACATGCATGCACACATACATACACACAGTGTATACAAGTAT  438

seq1  AATAATAATAAAAACGATATAAACTTGGAGGAGTGAGGGCAGCATGGAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATAAAAACGATATAAACTTGGAGGAGTGAGGGCAGCATGGAGG  488

seq1  GATTTGAGGGAGAATAGGTGGGAGGAACCGGAGGATATAAAAGGAGGAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGGGAGAATAGGTGGGAGGAACCGGAGGATATAAAAGGAGGAGG  538

seq1  GAAGTGGTCTAATTCTATTTCATTTTAAAACATTAAAAGTAAAATATAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTCTAATTCTATTTCATTTTAAAACATTAAAAGTAAAATATAAT  588

seq1  AAAATACATTCTCATAGTACACATATTGATAAGATAAGTAAACAAATATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATTCTCATAGTACACATATTGATAAGATAAGTAAACAAATATT  638

seq1  CAATATGGACTATAAGTACATACCTTATACCCCATCTCCTTTAACAGCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGGACTATAAGTACATACCTTATACCCCATCTCCTTTAACAGCAA  688

seq1  AGGTCTTTGACTGTATCCATGATTACTTCTATAACTTTTTTTTTAGCAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTTGACTGTATCCATGATTACTTCTATAACTTTTTTTTTAGCAAG  738

seq1  CATGTATCTTAATACATTTATAAGATGGACACCAATAAAATGATTAGCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCTTAATACATTTATAAGATGGACACCAATAAAATGATTAGCAC  788

seq1  TGATCACAGAATTTAATCTGTTTGCTTTTTTGATTTTCTTAATGTTAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACAGAATTTAATCTGTTTGCTTTTTTGATTTTCTTAATGTTAACT  838

seq1  AATTAGTAACAACTCAATAAATATTCATAAAGTACTTTCTTGCTAATAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTAACAACTCAATAAATATTCATAAAGTACTTTCTTGCTAATAAT  888

seq1  GAGGTCTTTAGGGCAGAGAACAAAAGCAGGGGGCTTTACGGTTCTGGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTTAGGGCAGAGAACAAAAGCAGGGGGCTTTACGGTTCTGGGGT  938

seq1  TATACAGACCAAATTTCAATCTGAAACACATGCAGATTTTACAACATAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGACCAAATTTCAATCTGAAACACATGCAGATTTTACAACATAAT  988

seq1  AAAGGGTACAAAATAGGAGATTCTTGTTACAGAGAACCAGACGTGTTAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTACAAAATAGGAGATTCTTGTTACAGAGAACCAGACGTGTTAAC  1038

seq1  TCTCTGGAAGTTTTTAGAGCAAAATAACTCATGTATTGGAAGATGCAACT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAAGTTTTTAGAGCAAAATAACTCATGTATTGGAAGATGCAACT  1088

seq1  TCTTGTCTATAACATGGATTAAGTTGATGACCAGAGCATCACAACAAGAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTATAACATGGATTAAGTTGATGACCAGAGCATCACAACAAGAT  1138

seq1  GGCAAGAATTC  1160
      |||||||||||
seq2  GGCAAGAATTC  1149