BAC Information

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BAC

Clone NameB6Ng01-038N14
Chromosome2 (Build37)
Map Location 83,548,357 - 83,549,556
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15
Downstream geneItgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038N14.bB6Ng01-038N14.g
ACCDH866291DH866292
length1,175948
definitionDH866291|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N14, 5' end.DH866292|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatttccagctaccacataatggcttacaaccatctgtacagct
acagtgtactcatacacataaaataaatgaataaatcttttttaaaaagt
gtgtgagagttttggctgggtgcacgtcagcatgcatgtctgtgtatgtg
aggggcctaaagagggtgtaggaccttcggaactggagttgtggacaatt
gtgagctcctggggcactgagagccaagcctgggtcctctgtaagtgctc
ttaacagtggagacattccacctccacgcccagtatgtaagatcttaaaa
cacttgatgcctcctctagttagcgctcttctccttaaccgttcttccat
ccctaacagtcaatttatagattttttttttaattctaacttgaacaaga
acagagccgcagaaagagtttgatcagtcgcattgaccagttggcaatga
ctgagtcccagaagcactgttaccttcagccacacctagattgcagagtt
tgggttgtaaactatttttattttatgtttatgagtgctttacttgaatg
tacatttgttcactatgtgtgtgactgagacccgcagaagccagaagagt
ttgttggacccctggaactggaggtcctgagccaggatgtgggtgctgag
aaccaggtcctctgcaagagacctcttaaccactgagccagctctctagc
tcctagcatagacttttcttaagaggcttgtcacagtaaacattatgtat
agatagtgcatgcaaacattaaacagtaagtgtgtataggtagtgtgtat
ctagttttccagatctataaagagagttatgacaagtatgttgttttacc
tgtctttctgtcttgtgttgttccacacctactaggttttccctcataga
acctcatggtagttatcctctcaagtcctgctctccacactatgtcccat
tagagctcacagataaaatactctaaatgttagtggacgcctggaggatt
agatgtgggcgtcccgtggttgatgcctgtgttccattatccagaaacct
gcttacagcacagattgttcttccctcctatgttcagagcttcatgaaca
catttaaagtgggcaatttaaggttgaatagcccctagctatgccttcat
gcacggaatcctgattacgtttttg
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagacgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttccttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac
aacgtttagtgggtctatttggattctggagacaacacatccctcacttg
ggtgtgtactaggcctatttaccaagtgactcggaaagctgctagctttg
tgtggggctggaacaggagaagcccttctacagggccagctctgtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83548357_83549556
seq2: B6Ng01-038N14.b_47_1221

seq1  GAATTCAATTTCCAGCTACCACATAATGGCTTACAACCATCTGTACAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTCCAGCTACCACATAATGGCTTACAACCATCTGTACAGCT  50

seq1  ACAGTGTACTCATACACATAAAATAAATGAATAAATCTTTTTTAAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTACTCATACACATAAAATAAATGAATAAATCTTTTTTAAAAAGT  100

seq1  GTGTGAGAGTTTTGGCTGGGTGCACGTCAGCATGCATGTCTGTGTATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGAGTTTTGGCTGGGTGCACGTCAGCATGCATGTCTGTGTATGTG  150

seq1  AGGGGCCTAAAGAGGGTGTAGGACCTTCGGAACTGGAGTTGTGGACAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCTAAAGAGGGTGTAGGACCTTCGGAACTGGAGTTGTGGACAATT  200

seq1  GTGAGCTCCTGGGGCACTGAGAGCCAAGCCTGGGTCCTCTGTAAGTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTCCTGGGGCACTGAGAGCCAAGCCTGGGTCCTCTGTAAGTGCTC  250

seq1  TTAACAGTGGAGACATTCCACCTCCACGCCCAGTATGTAAGATCTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTGGAGACATTCCACCTCCACGCCCAGTATGTAAGATCTTAAAA  300

seq1  CACTTGATGCCTCCTCTAGTTAGCGCTCTTCTCCTTAACCGTTCTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATGCCTCCTCTAGTTAGCGCTCTTCTCCTTAACCGTTCTTCCAT  350

seq1  CCCTAACAGTCAATTTATAGATTTTTTTTTTAATTCTAACTTGAACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACAGTCAATTTATAGATTTTTTTTTTAATTCTAACTTGAACAAGA  400

seq1  ACAGAGCCGCAGAAAGAGTTTGATCAGTCGCATTGACCAGTTGGCAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCGCAGAAAGAGTTTGATCAGTCGCATTGACCAGTTGGCAATGA  450

seq1  CTGAGTCCCAGAAGCACTGTTACCTTCAGCCACACCTAGATTGCAGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCCAGAAGCACTGTTACCTTCAGCCACACCTAGATTGCAGAGTT  500

seq1  TGGGTTGTAAACTATTTTTATTTTATGTTTATGAGTGCTTTACTTGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTAAACTATTTTTATTTTATGTTTATGAGTGCTTTACTTGAATG  550

seq1  TACATTTGTTCACTATGTGTGTGACTGAGACCCGCAGAAGCCAGAAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGTTCACTATGTGTGTGACTGAGACCCGCAGAAGCCAGAAGAGT  600

seq1  TTGTTGGACCCCTGGAACTGGAGGTCCTGAGCCAGGATGTGGGTGCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGACCCCTGGAACTGGAGGTCCTGAGCCAGGATGTGGGTGCTGAG  650

seq1  AACCAGGTCCTCTGCAAGAGACCTCTTAACCACTGAGCCAGCTCTCTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGTCCTCTGCAAGAGACCTCTTAACCACTGAGCCAGCTCTCTAGC  700

seq1  TCCTAGCATAGACTTTTCTTAAGAGGCTTGTCACAGTAAACATTATGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCATAGACTTTTCTTAAGAGGCTTGTCACAGTAAACATTATGTAT  750

seq1  AGATAGTGCATGCAAACATTAAACAGTAAGTGTGTATAGGTAGTGTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTGCATGCAAACATTAAACAGTAAGTGTGTATAGGTAGTGTGTAT  800

seq1  CTAGTTTTCCAGATCTATAAAGAGAGTTATGACAAGTATGTTGTTTTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTCCAGATCTATAAAGAGAGTTATGACAAGTATGTTGTTTTACC  850

seq1  TGTCTTACTGTCTTGTGTTGTTCCACACCTACTAGGTTTTCCCTCATAGA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCTGTCTTGTGTTGTTCCACACCTACTAGGTTTTCCCTCATAGA  900

seq1  ACCTCAGGGTAGTTATCCTCTCAAGTCCTGCTCTCCACACTATGTCCCAT  950
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATGGTAGTTATCCTCTCAAGTCCTGCTCTCCACACTATGTCCCAT  950

seq1  TAGAGCTCACAGATAAAATACTCTAAATGTTAGTGGACGCCTGGAGGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGAGCTCACAGATAAAATACTCTAAATGTTAGTGGACGCCTGGAGG-AT  999

seq1  AAGATGTGGGCGTCCCGTGGTTGATGCCCTGTGGTTCCATGTAATCCAGG  1050
       ||||||||||||||||||||||||| ||||| ||||||  | ||||| |
seq2  TAGATGTGGGCGTCCCGTGGTTGATG-CCTGT-GTTCCA--TTATCCA-G  1044

seq1  AAACCTGCTTACAGCACAGATTGTGTCTTCCCTCCTAATGTTCCAGAGCT  1100
      |||||||||||||||||||||||| ||||||||||| ||||| |||||| 
seq2  AAACCTGCTTACAGCACAGATTGT-TCTTCCCTCCT-ATGTT-CAGAGC-  1090

seq1  TTCATGAACACATTTTAAAGTGGGGCCATGTTAGGGTTTGAATAGCCTCC  1150
      |||||||||||| |||||||||||  ||  ||| || ||||||||   ||
seq2  TTCATGAACACA-TTTAAAGTGGG--CAATTTAAGG-TTGAATAG---CC  1133

seq1  CTTAGCTATGCCCTTTCAGTGCACTGAATATCCTGATTTAACTGTTTTTG  1200
      | ||||||||||  |||| ||||| ||  |||||||||  || |||||||
seq2  CCTAGCTATGCC--TTCA-TGCACGGA--ATCCTGATT--AC-GTTTTTG  1175