BAC Information

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BAC

Clone NameB6Ng01-039D16
Chromosome2 (Build37)
Map Location 132,723,448 - 132,724,173
singlet/doubletsinglet
Overlap genenone
Upstream geneLamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik
Downstream gene5830467P10Rik, LOC668908, LOC100043785, A430048G15Rik, Bmp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039D16.b
ACCDH866556
length728
definitionDH866556|Mus musculus domesticus DNA, BAC clone: B6Ng01-039D16, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttaagcttggcagacgtcatcacgtgttagaaagccaggcat
ttcttttctccataatggcccatgattagcttggcatgcagaaacacaag
tgtggggactgatagggaagtcaggccacactggaaggttcaggggcagt
tcaaaggctattgtaatctatggatggccagagacccagccagatgcagt
aggtggggtaggagaacactggcaagccatctcagagccaaaaagagttt
gctgacatggctaagactattgtctacatgcaaaaaccattctcctgggt
tggagagatggctcagtggttaagagctccgactgctcttctgaagtcat
gagttcaaatcccagcaaccacgtggtggctcacaaccatccataatgag
atctgatgctctcttgtggtgtgtctgaagacagatacagtgtacttaca
tataataaataaataaatctttaaaaaaaccattctcctttattcctcca
taacagaacttgatttttgatggagtcaatgtgtctagccccagtgctgg
aggcacactgctctacaccaatcatgagaatcccatttcccaagctcctg
ttgtctttgtggataagggtggacacatgacctagttctgaccagtgggg
cctgaggtatgctgtggagactcatgtgaccatctgtcatcttgatgaga
aggcaacgcttgttattttagacttcac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_132723448_132724173
seq2: B6Ng01-039D16.b_35_763 (reverse)

seq1  GTGAAGTCTAAATTAAC-AGCGTTGCCTTCTCATCAAGATGACAGATGGT  49
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  GTGAAGTCTAAAATAACAAGCGTTGCCTTCTCATCAAGATGACAGATGGT  50

seq1  CACATGAGTCTCCACAGCATACCTCAGGCCCCACTGGTCAGAACTAGGTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGTCTCCACAGCATACCTCAGGCCCCACTGGTCAGAACTAGGTC  100

seq1  ATGTGTCCACCCTTATCCACAAAGACAACAGGAGCTTGGGAAATGGGATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCACCCTTATCCACAAAGACAACAGGAGCTTGGGAAATGGGATT  150

seq1  CTCATGATTGGTGTAGAGCAGTGTGCCTCCAGCACTGGGGCTAGACACAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGATTGGTGTAGAGCAGTGTGCCTCCAGCACTGGGGCTAGACACAT  200

seq1  TGACTCCATCAAAAATCAAGTTCTGTTATGGAGGAATAAAGGAGAATGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCATCAAAAATCAAGTTCTGTTATGGAGGAATAAAGGAGAATGGT  250

seq1  TTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTATCTGTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTATCTGTCT  300

seq1  TCAGACACACCACAAGAGAGCATCAGATCTCATTATGGATGGTTGTGAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACACCACAAGAGAGCATCAGATCTCATTATGGATGGTTGTGAGC  350

seq1  CACCACGTGGTTGCTGGGATTTGAACTCATGACTTCAGAAGAGCAGTCGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGTGGTTGCTGGGATTTGAACTCATGACTTCAGAAGAGCAGTCGG  400

seq1  AGCTCTTAACCACTGAGCCATCTCTCCAACCCAGGAGAATGGTTTTTGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTAACCACTGAGCCATCTCTCCAACCCAGGAGAATGGTTTTTGCA  450

seq1  TGTAGACAATAGTCTTAGCCATGTCAGCAAACTCTTTTTGGCTCTGAGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACAATAGTCTTAGCCATGTCAGCAAACTCTTTTTGGCTCTGAGAT  500

seq1  GGCTTGCCAGTGTTCTCCTACCCCACCTACTGCATCTGGCTGGGTCTCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCCAGTGTTCTCCTACCCCACCTACTGCATCTGGCTGGGTCTCTG  550

seq1  GCCATCCATAGATTACAATAGCCTTTGAACTGCCCCTGAACCTTCCAGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCATAGATTACAATAGCCTTTGAACTGCCCCTGAACCTTCCAGTG  600

seq1  TGGCCTGACTTCCCTATCAGTCCCCACACTTGTGTTTCTGCATGCCAAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGACTTCCCTATCAGTCCCCACACTTGTGTTTCTGCATGCCAAGC  650

seq1  TGATCATGGGCCATTATGGAGAAAAGAAATGCCTGGCTTTCT-CCAC-TG  697
      | ||||||||||||||||||||||||||||||||||||||||  ||| ||
seq2  TAATCATGGGCCATTATGGAGAAAAGAAATGCCTGGCTTTCTAACACGTG  700

seq1  ATGACGTCTGCCAAGCTTAACTGAATTCC  726
      |||||||||||||||||||||||||||||
seq2  ATGACGTCTGCCAAGCTTAACTGAATTCC  729