BAC Information

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BAC

Clone NameB6Ng01-040C02
Chromosome2 (Build37)
Map Location 119,702,142 - 119,702,899
singlet/doubletsinglet
Overlap geneLOC625403
Upstream geneIvd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik
Downstream geneMga, Mapkbp1, Pla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040C02.bB6Ng01-040C02.g
ACCDH867192DH867193
length7581,107
definitionDH867192|Mus musculus domesticus DNA, BAC clone: B6Ng01-040C02, 5' end.DH867193|Mus musculus domesticus DNA, BAC clone: B6Ng01-040C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctagttcttttaattgtgtgtatatgtgtttatgtgtgtatg
taggcatgtttatgttgcagttggaggttgaaattggatattttcttcaa
ttgcccctctttttttttttttttttaaagacatgctctcttactgaacc
tggagctcattgatcttattgatttgtctagaagggatggccagtgagct
ctgagaatccttctgtgtctgtctctcagcactggggttacagatgtgag
ctgctgtgcccagcttttttacatgatttctgggggattgaattcaggtt
ctctggccatgcagcaagcactttacctaatatttttcttttatttttat
ttcacttatttttattgtgtatgcattcatccatttagtgtgtgtatgtg
tgtgtatatttgtgtgtgcatatgtaacagttcatatgtgaaagtcagag
gaacactttcaggagttggttcttccttctatgtgggtcttgggacccaa
gctcaggctgacaggccaggggggaaggacctttacccactgaactatct
tgatggccctattcaaaatttttttattacatttatttatttgtgtgtgt
gggtgcacatatagcacaacttgtgtgctaattttctcattctaccatgt
gggtctcaggaattgaactcaggttgtctgccttgttcttttacccgcta
agccattgtcactagttttatttttaaaataaaatgggggagtatttaaa
ttgatttc
gaattcaaaagtaatggactagtttgtcttgcagaagaatagtcttagtc
aagacacacgaatactaataagacaggtgtgtcaagcttactgctcactg
ctctgatccagatctgtagtgagagaaaagcaattaaggcagaaagaaag
gtgcagtggggaaaaagaacgtaagagagtttaagttgtgaatgcagaga
aagcagctaaaatggttacagaatgtcctgctgtgccgtgaacattagca
aaggaacctgagagaaagaactcgcccactaaaggaccagcagcagtgca
ggtaatggaaacgtttttcccaggatgagcctcaggcacacagaggatgc
tgcagctatggtgggaggcctgggcaagctacctctcacactagtagagg
aacctggcagcatggtccctctggtcttgggtgtgcaggcatgaacaaaa
gatgcaaaggtgagtgggaacgggaggcttcctccaaggctccagaaagc
cactaatgcaagcaatgtgtggcaatgctagggtcctgaagagaccactg
tgtgacgctgggaaaaatgaagcctaaattccaatgaacaacctaggatt
ttgaggatgctaaggctaagtgatatctaccagacatggagtgaaggtga
cccaacagaatctatgtgcactgcagcagcagagctcaagagacaagttg
cccaagcgactccatcagaggtccatgtgctgaggcccacatgccagggc
cctgcagggcttggtgtttgcactcctgggctttggtcctgctgggaggt
ctatactttctctgctcccattcttccctttttgcaacaggaatatttgt
ttctgagccctattatattagaaatatggaaattgttttattttaaaggg
ctcatagttaagagactgtcttgagtctaacaatgtactttgaatttctg
aagagtattaatattaagacttgttaaagactgagagatgtttggagata
gacacgtattttttgaaatctggagatgaaaatgagatttgaggtgacgt
ggtggaatgttatttgaaatggatgtgtttgagtgaataacaatgattaa
aggaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_119702142_119702899
seq2: B6Ng01-040C02.b_43_800

seq1  GAATTCTCCTAGTTCTTTTAATTGTGTGTATATGTGTTTATGTGTGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAGTTCTTTTAATTGTGTGTATATGTGTTTATGTGTGTATG  50

seq1  TAGGCATGTTTATGTTGCAGTTGGAGGTTGAAATTGGATATTTTCTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATGTTTATGTTGCAGTTGGAGGTTGAAATTGGATATTTTCTTCAA  100

seq1  TTGCCCCTCTTTTTTTTTTTTTTTTTAAAGACATGCTCTCTTACTGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCTCTTTTTTTTTTTTTTTTTAAAGACATGCTCTCTTACTGAACC  150

seq1  TGGAGCTCATTGATCTTATTGATTTGTCTAGAAGGGATGGCCAGTGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTCATTGATCTTATTGATTTGTCTAGAAGGGATGGCCAGTGAGCT  200

seq1  CTGAGAATCCTTCTGTGTCTGTCTCTCAGCACTGGGGTTACAGATGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATCCTTCTGTGTCTGTCTCTCAGCACTGGGGTTACAGATGTGAG  250

seq1  CTGCTGTGCCCAGCTTTTTTACATGATTTCTGGGGGATTGAATTCAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGCCCAGCTTTTTTACATGATTTCTGGGGGATTGAATTCAGGTT  300

seq1  CTCTGGCCATGCAGCAAGCACTTTACCTAATATTTTTCTTTTATTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCCATGCAGCAAGCACTTTACCTAATATTTTTCTTTTATTTTTAT  350

seq1  TTCACTTATTTTTATTGTGTATGCATTCATCCATTTAGTGTGTGTATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTATTTTTATTGTGTATGCATTCATCCATTTAGTGTGTGTATGTG  400

seq1  TGTGTATATTTGTGTGTGCATATGTAACAGTTCATATGTGAAAGTCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATTTGTGTGTGCATATGTAACAGTTCATATGTGAAAGTCAGAG  450

seq1  GAACACTTTCAGGAGTTGGTTCTTCCTTCTATGTGGGTCTTGGGACCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTTCAGGAGTTGGTTCTTCCTTCTATGTGGGTCTTGGGACCCAA  500

seq1  GCTCAGGCTGACAGGCCAGGGGGGAAGGACCTTTACCCACTGAACTATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGCTGACAGGCCAGGGGGGAAGGACCTTTACCCACTGAACTATCT  550

seq1  TGATGGCCCTATTCAAAATTTTTTTATTACATTTATTTATTTGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCCCTATTCAAAATTTTTTTATTACATTTATTTATTTGTGTGTGT  600

seq1  GGGTGCACATATAGCACAACTTGTGTGCTAATTTTCTCATTCTACCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACATATAGCACAACTTGTGTGCTAATTTTCTCATTCTACCATGT  650

seq1  GGGTCTCAGGAATTGAACTCAGGTTGTCTGCCTTGTTCTTTTACCCGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAGGAATTGAACTCAGGTTGTCTGCCTTGTTCTTTTACCCGCTA  700

seq1  AGCCA-TGTCACTAGTTTTATTTTTAAAATAAAATGGGGGAGTATTTAAA  749
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGCCATTGTCACTAGTTTTATTTTTAAAATAAAATGGGGGAGTATTT-AA  749

seq1  ATTGATTTC  758
      |||||||||
seq2  ATTGATTTC  758