BAC Information

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BAC

Clone NameB6Ng01-040E08
Chromosome2 (Build37)15 (Build37)
Map Location 142,776,561 - 142,777,09666,722,805 - 66,723,502
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040E08.bB6Ng01-040E08.g
ACCDH867291DH867292
length678699
definitionDH867291|Mus musculus domesticus DNA, BAC clone: B6Ng01-040E08, 5' end.DH867292|Mus musculus domesticus DNA, BAC clone: B6Ng01-040E08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,561 - 142,777,096)(66,722,805 - 66,723,502)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
atctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacgttgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattcctccataggttcttt
tatccttgagaagagtttttgctatcct
gaattcattcaccttaccctgtggagtctgggactttccctttaagagct
gtcagagcggggaggctggccaagctgggctggaggtggggacagaggaa
agaaaaagagagagggggagagtagcagaaaaagtttttttagaggaaaa
tgcagggctagtctgttggcctgacgtcagatgtcgctttgacaaacgcc
cccgggggctgaggaaggctctccgctgctctgatgggccagcccagtcc
tggcccagctccctggagaggcatccgcatcctctgggctgagccgtagc
tcctgtgacgctgacttccaggcatgaggtggctcctgccctggacgctg
gcagccgtggcagtcctgagggtgggcaacatcctggccacggtgagtcc
tgcttagaagggatcagtgaggggacctgatcccttcctgcctggttctg
aggcccgagggactggggggtcaagacaaggtgggttggaataatgaaca
gcgggaggagagagattcttgagtctgaagaaggtggtggagtggggcag
aaggcgcatcccttgagagagacaccctgtttcctatatttcacagacaa
tatacaacaaaataagggcctggggatctgcaccctggactggccctgtg
atcttgggtgggtcactcacgaattcaaagcagcataaaatgaggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776561_142777096
seq2: B6Ng01-040E08.b_190_725 (reverse)

seq1  AGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCAC  50
      ||||||||||||| ||||||||||||||||||||||| ||| ||||||||
seq2  AGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTATGGAGGAATCAC  50

seq1  CATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCAT  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATGCCTGACCTAAAGCTTTACTACAGGGCAATTGTGATAAAAACTGCAT  100

seq1  GGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGAC  150

seq1  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  200

seq1  TAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  250

seq1  ACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCT  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  300

seq1  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  350

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  400

seq1  TGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  450
      |||| |||||||| |||||||||||||||||||||||||||||  |||||
seq2  TGGGTACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGCTCTGTA  450

seq1  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  500

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACC  536
      ||||||||||| ||||||||||||||||||||||||
seq2  GGCAAAAGACAACGTCAATAAGACAAAAAGACCACC  536

seq1: chr15_66722805_66723502
seq2: B6Ng01-040E08.g_71_769

seq1  GAATTCATTCACCTTACCCTGTGGAGTCTGGGACTTTCCCTTTAAGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCACCTTACCCTGTGGAGTCTGGGACTTTCCCTTTAAGAGCT  50

seq1  GTCAGAGCGGGGAGGCTGGCCAAGCTGGGCTGGAGGTGGGGACAGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGCGGGGAGGCTGGCCAAGCTGGGCTGGAGGTGGGGACAGAGGAA  100

seq1  AGAAAAAGAGAGAGGGGGAGAGTAGCAGAAAAAGTTTTTTTAGAGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGAGAGAGGGGGAGAGTAGCAGAAAAAGTTTTTTTAGAGGAAAA  150

seq1  TGCAGGGCTAGTCTGTTGGCCTGACGTCAGATGTCGCTTTGACAAACGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGCTAGTCTGTTGGCCTGACGTCAGATGTCGCTTTGACAAACGCC  200

seq1  CCCGGGGGCTGAGGAAGGCTCTCCGCTGCTCTGATGGGCCAGCCCAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGGGCTGAGGAAGGCTCTCCGCTGCTCTGATGGGCCAGCCCAGTCC  250

seq1  TGGCCCAGCTCCCTGGAGAGGCATCCGCATCCTCTGGGCTGAGCCGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGCTCCCTGGAGAGGCATCCGCATCCTCTGGGCTGAGCCGTAGC  300

seq1  TCCTGTGACGCTGACTTCCAGGCATGAGGTGGCTCCTGCCCTGGACGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGACGCTGACTTCCAGGCATGAGGTGGCTCCTGCCCTGGACGCTG  350

seq1  GCAGCCGTGGCAGTCCTGAGGGTGGGCAACATCCTGGCCACGGTGAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCGTGGCAGTCCTGAGGGTGGGCAACATCCTGGCCACGGTGAGTCC  400

seq1  TGCTTAGAAGGGATCAGTGAGGGGACCTGATCCCTTCCTGCCTGGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGAAGGGATCAGTGAGGGGACCTGATCCCTTCCTGCCTGGTTCTG  450

seq1  AGGCCCGAGGGACTGGGGGGTCAAGACAAGGTGGGTTGGAATAATGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCGAGGGACTGGGGGGTCAAGACAAGGTGGGTTGGAATAATGAACA  500

seq1  GCGGGAGGAGAGAGATTCTTGAGTCTGAAGAAGGTGGTGGAGTGGGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGAGGAGAGAGATTCTTGAGTCTGAAGAAGGTGGTGGAGTGGGGCAG  550

seq1  AAGGCGCATCCCTTGAGAGAGACACCCTGTTTCCTATA-TTCACAGACAA  599
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGGCGCATCCCTTGAGAGAGACACCCTGTTTCCTATATTTCACAGACAA  600

seq1  TATACAACAAAATAAGGGCCTGGGGATCTGCACCCTGGACTGGCCCTGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAACAAAATAAGGGCCTGGGGATCTGCACCCTGGACTGGCCCTGTG  650

seq1  ATCTTGGGTGGGTCACTCACGAATTCAAAGCAGCATAAAATGAGGGGTT  698
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGTGGGTCACTCACGAATTCAAAGCAGCATAAAATGAGGGGTT  699