BAC Information

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BAC

Clone NameB6Ng01-040I15
Chromosome2 (Build37)
Map Location 135,287,703 - 135,366,796
singlet/doubletdoublet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040I15.bB6Ng01-040I15.g
ACCDH867471DH867472
length707700
definitionDH867471|Mus musculus domesticus DNA, BAC clone: B6Ng01-040I15, 5' end.DH867472|Mus musculus domesticus DNA, BAC clone: B6Ng01-040I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,287,703 - 135,288,409)(135,366,100 - 135,366,796)
sequence
gaattcaacaggagaaaagtgcctgaataccactgtcaaaactgatgtta
cacaaagtgtcatcagaccagcaacatctgcatcatctgagagctggtca
gaaatgaaattttacaccacccttcatagatctagtgtttcttagcccaa
acctgacaaaccctagttcttttgtttctatattaactttagggaagcga
taaagcttgctgagagtctctttacatagcattatttttttaaaagattc
agcctcaactacagaatatgtacagctcattatagatctatagctgattc
tgtatgaaggaaaaagaccaaggttgcatttttatatattacagcaaact
taaagcctaaaaatcagctatttgtatacacatgacatgcctttaggtgg
agcactaaaaagggaatctaagctagagaactgtcagtctaggaaatgcc
atgtattatttgttctacaggaaaggaagcacgttgtgagattccacccc
tggatataataatgtcacagatactgtgagactcaaattttagctctaaa
atcctcaaaagaatatttccagggtcactttaaggtcacaatctaggctt
cattgccaacccatacatcctatcctggtctgtgccatcccttccatcca
acatcatatatatgtgtatatatatatatgtgtgtatatatatatatata
tgcaaac
gaattctgcttataactcctaactgaaggttctgagctgtctctgtctct
gtctctgtctctgtctctctgtctctgtctctctctgtctctctctctct
ctgtctctctctctctctctctctctctctctctctctctctgtgtctct
cttacctagaaaaaatccttctgcaaaataagcctatacccagtgagctg
catgccctgtttctgaaccaagtttcttgtttttcttttttattagatat
tttctttatttacatttcaaatgttacctccgaaaatcccctaacccctc
cccgctcccaacccacccactcccattcctggtcctggcattcccctata
ctggggcatagagcctaagccaagtttctaaagtgcatttttttccaaaa
catgatggcaaagtctccacttcctcacatggaaagacaatggctaccag
gaaaatgctacctaggttcagcaatatttttagaaatatgttgaagaatg
agaaaacagaaaagaacagagaactgtgtggtaataagactctatgagaa
ttgtttcctaaaggcattttctgaaagatataatattttcctcatgatta
ccctaaaaatgggatttccagagtctggaaacagggaaatctgagcagtt
tctcacgattgtaccatgaatgcgattttagaagtgtttcggttaacata

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_135287703_135288409
seq2: B6Ng01-040I15.b_44_750

seq1  GAATTCAACAGGAGAAAAGTGCCTGAATACCACTGTCAAAACTGATGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGAGAAAAGTGCCTGAATACCACTGTCAAAACTGATGTTA  50

seq1  CACAAAGTGTCATCAGACCAGCAACATCTGCATCATCTGAGAGCTGGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTGTCATCAGACCAGCAACATCTGCATCATCTGAGAGCTGGTCA  100

seq1  GAAATGAAATTTTACACCACCCTTCATAGATCTAGTGTTTCTTAGCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAATTTTACACCACCCTTCATAGATCTAGTGTTTCTTAGCCCAA  150

seq1  ACCTGACAAACCCTAGTTCTTTTGTTTCTATATTAACTTTAGGGAAGCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACAAACCCTAGTTCTTTTGTTTCTATATTAACTTTAGGGAAGCGA  200

seq1  TAAAGCTTGCTGAGAGTCTCTTTACATAGCATTATTTTTTTAAAAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTGCTGAGAGTCTCTTTACATAGCATTATTTTTTTAAAAGATTC  250

seq1  AGCCTCAACTACAGAATATGTACAGCTCATTATAGATCTATAGCTGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAACTACAGAATATGTACAGCTCATTATAGATCTATAGCTGATTC  300

seq1  TGTATGAAGGAAAAAGACCAAGGTTGCATTTTTATATATTACAGCAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAAGGAAAAAGACCAAGGTTGCATTTTTATATATTACAGCAAACT  350

seq1  TAAAGCCTAAAAATCAGCTATTTGTATACACATGACATGCCTTTAGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTAAAAATCAGCTATTTGTATACACATGACATGCCTTTAGGTGG  400

seq1  AGCACTAAAAAGGGAATCTAAGCTAGAGAACTGTCAGTCTAGGAAATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTAAAAAGGGAATCTAAGCTAGAGAACTGTCAGTCTAGGAAATGCC  450

seq1  ATGTATTATTTGTTCTACAGGAAAGGAAGCACGTTGTGAGATTCCACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTATTTGTTCTACAGGAAAGGAAGCACGTTGTGAGATTCCACCCC  500

seq1  TGGATATAATAATGTCACAGATACTGTGAGACTCAAATTTTAGCTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATAATAATGTCACAGATACTGTGAGACTCAAATTTTAGCTCTAAA  550

seq1  ATCCTCAAAAGAATATTTCCAGGGTCACTTTAAGGTCACAATCTAGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAAAAGAATATTTCCAGGGTCACTTTAAGGTCACAATCTAGGCTT  600

seq1  CATTGCCAACCCATACATCCTATCCTGGTCTGTGCCATCCCTTCCATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCAACCCATACATCCTATCCTGGTCTGTGCCATCCCTTCCATCCA  650

seq1  ACATCATATATATGTGTATATATATATATGTGTGTATATATATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATATATATGTGTATATATATATATGTGTGTATATATATATATATA  700

seq1  TGTAAAC  707
      || ||||
seq2  TGCAAAC  707

seq1: chr2_135366100_135366796
seq2: B6Ng01-040I15.g_68_766 (reverse)

seq1  ATGTTAACC-AAACACTTCTAAAATCGCATTCATGGTACAATCGTAAG-A  48
      ||||||||| ||||||||||||||||||||||||||||||||||| || |
seq2  ATGTTAACCGAAACACTTCTAAAATCGCATTCATGGTACAATCGTGAGAA  50

seq1  ACTGCTCAGATTTCCCTGTTTCCAGACTCTGGAAATCCCATTTTTAGGGT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCAGATTTCCCTGTTTCCAGACTCTGGAAATCCCATTTTTAGGGT  100

seq1  AATCATGAGGAAAATATTATATCCTTCAGAAAATGCCTTTAGGAAACAAT  148
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATCATGAGGAAAATATTATATCTTTCAGAAAATGCCTTTAGGAAACAAT  150

seq1  TCTCATAGAGTCTTATTACCACACAGTTCTCTGTTCTTTTCTGTTTTCTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGAGTCTTATTACCACACAGTTCTCTGTTCTTTTCTGTTTTCTC  200

seq1  ATTCTTCAACATATTTCTCTAATTATTGCTGAACCTAGGTAGCATTTTCC  248
      ||||||||||||||||||  || |||||||||||||||||||||||||||
seq2  ATTCTTCAACATATTTCTAAAAATATTGCTGAACCTAGGTAGCATTTTCC  250

seq1  TGGTAGCCATTGTCTTTCCATGTGAGGAAGTGGAGACTTTGCCATCATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCCATTGTCTTTCCATGTGAGGAAGTGGAGACTTTGCCATCATGT  300

seq1  CTTGGAAAAAAATGCACTTTAGAAACTTGGCTTAGGCTCTATGCCCCAGT  348
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAAAAATGCACTTTAGAAACTTGGCTTAGGCTCTATGCCCCAGT  350

seq1  ATAGGGGAATGCCAGGACCAGGAATGGGAGTGGGTGGGTTGGGAGCGGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGAATGCCAGGACCAGGAATGGGAGTGGGTGGGTTGGGAGCGGGG  400

seq1  AGGGGTTAGGGGATTTTCGGAGGTAACATTTGAAATGTAAATAAAGAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTAGGGGATTTTCGGAGGTAACATTTGAAATGTAAATAAAGAAAA  450

seq1  TATCTAATAAAAAAGAAAAACAAGAAACTTGGTTCAGAAACAGGGCATGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATAAAAAAGAAAAACAAGAAACTTGGTTCAGAAACAGGGCATGC  500

seq1  AGCTCACTGGGTATAGGCTTATTTTGCAGAAGGATTTTTTCTAGGTAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTGGGTATAGGCTTATTTTGCAGAAGGATTTTTTCTAGGTAAGA  550

seq1  GAGACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGA  600

seq1  GAGAGAGAGAGACAGAGAGAGACAGAGACAGAGAGACAGAGACAGAGACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGACAGAGAGAGACAGAGACAGAGAGACAGAGACAGAGACA  650

seq1  GAGACAGAGACAGCTCAGAACCTTCAGTTAGGAGTTATAAGCAGAATTC  697
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACAGCTCAGAACCTTCAGTTAGGAGTTATAAGCAGAATTC  699