BAC Information

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BAC

Clone NameB6Ng01-040K02
Chromosome2 (Build37)
Map Location 22,997,140 - 22,997,772
singlet/doubletsinglet
Overlap geneMastl
Upstream geneMyo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5
Downstream geneYme1l1, 4931423N10Rik, LOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1, Hnmt, Tbpl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040K02.bB6Ng01-040K02.g
ACCDH867533DH867534
length430631
definitionDH867533|Mus musculus domesticus DNA, BAC clone: B6Ng01-040K02, 5' end.DH867534|Mus musculus domesticus DNA, BAC clone: B6Ng01-040K02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatctagctgtaaagaaaaatgaagtcaggaaaatagatggaactaaaaa
cagtatgttgagtgaggtgagccagacctagaaagaccaatgtcaatttt
gtttttattcctatcttggagtctttacatgtgaacatatagcctggagt
aactgcaagaaccaagcagattaaaagggaccatggcagggagtgacatg
gggaagaagctctaattgggggaacgatagtatgaaacaggtgttttgaa
aaggaaatgtaaaagactgagctaggtgtaatatggaaaggagctggaag
actgcatagaggtagaagaagagaagaggaataaataatgctatggtgtt
tttaaattctataggtaagcattattttatgtttacctaaaattaaatgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattctgacttgcaggaatgactacagtattcttaaatttaagccaact
gtgatcacctgaccaatacctacataagattaggcccaccaatatgatgc
tgtggggagaggaggtattaacacgttttctcttttctgaggatctatat
gtagttaatggtttctggagaagagagagttctttctctgagtagccact
gttaagggcacacactctagtaaatgaccatactataactaactgggcat
ttcagaaaacacaaaaagatctgaaagcaacagaaggactgattgggaag
aggaaggggatcaatgggcgtggggtgacagggtgaagtatgtgtgtgag
taccactaaaatacattataaatatgtgtgaaaattcactggtacctgct
agacttaaaaattataagcgctgaaattaggcaagataatttttgttata
aagtactgagaaaaaaaaggaagtaagttaatttcaactatgggcccttt
atatcatctaatacgttaagcttaggcaagagagaaattaatctatttta
ttagcatgtttcaattatttgaatgcttagtgactagggagggaactgtt
tgaaaggattagaaggatcagaagagtggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_22997140_22997772
seq2: B6Ng01-040K02.g_69_699

seq1  GAATTCTGACTTGCAGGAATGACTACAGTATTCTTAAATTTAAGCCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTTGCAGGAATGACTACAGTATTCTTAAATTTAAGCCAACT  50

seq1  GTGATCACCTGACCAATACCTACATAAGATTAGGCCCACCAATATGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCACCTGACCAATACCTACATAAGATTAGGCCCACCAATATGATGC  100

seq1  TGTGGGGAGAGGAGGTATTAACACGTTTTCTCTTTTCTGAGGATCTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGAGAGGAGGTATTAACACGTTTTCTCTTTTCTGAGGATCTATAT  150

seq1  GTAGTTAATGGTTTCTGGAGAAGAGAGAGTTCTTTCTCTGAGTAGCCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTAATGGTTTCTGGAGAAGAGAGAGTTCTTTCTCTGAGTAGCCACT  200

seq1  GTTAAGGGCACACACTCTAGTAAATGACCATACTATAACTAACTGGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGGCACACACTCTAGTAAATGACCATACTATAACTAACTGGGCAT  250

seq1  TTCAGAAAACACAAAAAGATCTGAAAGCAACAGAAGGACTGATTGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAACACAAAAAGATCTGAAAGCAACAGAAGGACTGATTGGGAAG  300

seq1  AGGAAGGGGATCAATGGGCGTGGGGTGACAGGGTGAAGTATGTGTGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGGATCAATGGGCGTGGGGTGACAGGGTGAAGTATGTGTGTGAG  350

seq1  TACCACTAAAATACATTATAAATATGTGTGAAAATTCACTGGTACCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTAAAATACATTATAAATATGTGTGAAAATTCACTGGTACCTGCT  400

seq1  AGACTTAAAAATTATAAGCGCTGAAATTAGGCAAGATAATTTTTGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAAAAATTATAAGCGCTGAAATTAGGCAAGATAATTTTTGTTATA  450

seq1  AAGTACTGAGAAAAAAAAGGAAGTAAGTTAA-TTCAACTATGGGCCCTTT  499
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTACTGAGAAAAAAAAGGAAGTAAGTTAATTTCAACTATGGGCCCTTT  500

seq1  ATATCATCTAATACGTTAAGCTTAGGTCAAGAGAGAAATTAATCTATTTT  549
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATATCATCTAATACGTTAAGCTTAGG-CAAGAGAGAAATTAATCTATTTT  549

seq1  ATTAGCATGTTTCAATATATTTGAATGCTTAGTGACCAGGGAGGGAACTG  599
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  ATTAGCATGTTTCAAT-TATTTGAATGCTTAGTGACTAGGGAGGGAACTG  598

seq1  TTTGAAAGGATTAGAAGGATCAGGAAGAGTGGCC  633
      |||||||||||||||||||||| |||||||||||
seq2  TTTGAAAGGATTAGAAGGATCA-GAAGAGTGGCC  631