BAC Information

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BAC

Clone NameB6Ng01-041G13
Chromosome2 (Build37)
Map Location 43,636,191 - 43,823,028
singlet/doubletdoublet
Overlap geneArhgap15
Upstream geneLOC100041228, LOC100041245, Kynu
Downstream geneGtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041G13.bB6Ng01-041G13.g
ACCDH868083DH868084
length154858
definitionDH868083|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G13, 5' end.DH868084|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,822,875 - 43,823,028)(43,636,191 - 43,637,055)
sequence
gaattcaaagcctgtgcatttatagagacctttcctcaaaattgaaaaat
gtgtttggaaatcagctcaatggtagtattgcctagtatgagaaaagggg
attgtttccccttatttataaggaaaatagaaataagtggtggtggtggg
ttgg
gaattctgcccaccaagctacaggagctgtgcaaatgagaatcaaaaatg
ccaacagccaccaagacaggcagagccaaactaaatccatgatcctcacc
gatgctgggaaggtcactgaacctgtaagtcaaatgccccaaacatgctg
cagtctcttagcggacagatttaaaaaaaaaaatacagctaattaggttt
gttttgtttgtttacctaatgtgcatgagaaaactgttttgtaacggatt
ttatcttgcctacttatagttataataatagtcccagttacaagagcaga
gctgggcctaatccagagtgataaaggggatgtggagccaggctgaagag
cacctttgactcattttaagggcctctgctaccatgcttcagtgtcataa
aaataatgaggttatgctagcatgcggtgtttgtacttccaaatacagta
catcactttgaaaagccagaggctaaaattagctaagaatgaattgaggg
gggaaaaaaatcagcaacttcaaaatgtgaaaaatctttttcttcaaatc
gcccaataatatagaagagtgggaaatggtggtttgatctgcaataggct
caaatggttgaaatggtgtggctatttgaggtttggagaggaagccattt
tgtttcgataatgtgtcattagaaagatttgaaataaaatagttagagat
gatctctactgccaattgtgtccctggcccctgcacgcatcctgagccac
taaactcactgattgcgatgggtctcctctggtaaatttctaccataatg
gtggtaacttgcagctgagccataaatgtacaaatattatgcatgttagc
cactcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43822875_43823028
seq2: B6Ng01-041G13.b_44_197 (reverse)

seq1  CCAACCCACCACCACCACTTATTTCTATTTTCCTTATAAATAAGGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCACCACCACCACTTATTTCTATTTTCCTTATAAATAAGGGGAAA  50

seq1  CAATCCCCTTTTCTCATACTAGGCAATACTACCATTGAGCTGATTTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCCTTTTCTCATACTAGGCAATACTACCATTGAGCTGATTTCCAA  100

seq1  ACACATTTTTCAATTTTGAGGAAAGGTCTCTATAAATGCACAGGCTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTTTCAATTTTGAGGAAAGGTCTCTATAAATGCACAGGCTTTGA  150

seq1  ATTC  154
      ||||
seq2  ATTC  154

seq1: chr2_43636191_43637055
seq2: B6Ng01-041G13.g_69_926

seq1  GAATTCTGCCCACCAAGCTACAGGAGCTGTGCAAATGAGAATCAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCCACCAAGCTACAGGAGCTGTGCAAATGAGAATCAAAAATG  50

seq1  CCAACAGCCACCAAGACAGGCAGAGCCAAACTAAATCCATGATCCTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGCCACCAAGACAGGCAGAGCCAAACTAAATCCATGATCCTCACC  100

seq1  GATGCTGGGAAGGTCACTGAACCTGTAAGTCAAATGCCCCAAACATGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGGAAGGTCACTGAACCTGTAAGTCAAATGCCCCAAACATGCTG  150

seq1  CAGTCTCTTAGCGGACAGATTTAAAAAAAAAAATACAGCTAATTAGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTTAGCGGACAGATTTAAAAAAAAAAATACAGCTAATTAGGTTT  200

seq1  GTTTTGTTTGTTTACCTAATGTGCATGAGAAAACTGTTTTGTAACGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTGTTTACCTAATGTGCATGAGAAAACTGTTTTGTAACGGATT  250

seq1  TTATCTTGCCTACTTATAGTTATAATAATAGTCCCAGTTACAAGAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTGCCTACTTATAGTTATAATAATAGTCCCAGTTACAAGAGCAGA  300

seq1  GCTGGGCCTAATCCAGAGTGATAAAGGGGATGTGGAGCCAGGCTGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCCTAATCCAGAGTGATAAAGGGGATGTGGAGCCAGGCTGAAGAG  350

seq1  CACCTTTGACTCATTTTAAGGGCCTCTGCTACCATGCTTCAGTGTCATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGACTCATTTTAAGGGCCTCTGCTACCATGCTTCAGTGTCATAA  400

seq1  AAATAATGAGGTTATGCTAGCATGCGGTGTTTGTACTTCCAAATACAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGAGGTTATGCTAGCATGCGGTGTTTGTACTTCCAAATACAGTA  450

seq1  CATCACTTTGAAAAGCCAGAGGCTAAAATTAGCTAAGAATGAATTGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTTTGAAAAGCCAGAGGCTAAAATTAGCTAAGAATGAATTGAGGG  500

seq1  GGGAAAAAAATCAGCAACTTCAAAATGTGAAAAATCTTTTTCTTCAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAAATCAGCAACTTCAAAATGTGAAAAATCTTTTTCTTCAAATC  550

seq1  GCCCAATAATATAGAAGAGTGGGAAATGGTGGTTTGATCTGCAATAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATAATATAGAAGAGTGGGAAATGGTGGTTTGATCTGCAATAGGCT  600

seq1  CAAATGGTTGAAATGGTGTGGCTATTTGAGGTTTGGAGAGGAAGCCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGTTGAAATGGTGTGGCTATTTGAGGTTTGGAGAGGAAGCCATTT  650

seq1  TGTTTCGATAATGTGTCATTAGAAAGATTTGAAATAAAATAGTTAGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGATAATGTGTCATTAGAAAGATTTGAAATAAAATAGTTAGAGAT  700

seq1  GAACTCTACTGCCAATTGTGTCCCTGG-CCCTGCACGCATCCTGAGCCAC  749
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GATCTCTACTGCCAATTGTGTCCCTGGCCCCTGCACGCATCCTGAGCCAC  750

seq1  TAAACTCACTGATTGCGATGGGTCTCCTCTGGTTAATTTTCTACCATAAT  799
      |||||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  TAAACTCACTGATTGCGATGGGTCTCCTCTGG-TAAATTTCTACCATAAT  799

seq1  GGTGGTAACTTGCAGCTGAGGCCATAGAATGTTACAAAATTATTTATGCA  849
      ||||||||||||||||||| |||||| |||| ||||||  || |||||| 
seq2  GGTGGTAACTTGCAGCTGA-GCCATA-AATG-TACAAA--TA-TTATGC-  842

seq1  ATGTTAGCCACTCTTT  865
      ||||||||||||||||
seq2  ATGTTAGCCACTCTTT  858