BAC Information

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BAC

Clone NameB6Ng01-041K02
Chromosome2 (Build37)
Map Location 3,943,751 - 3,944,437
singlet/doubletsinglet
Overlap genenone
Upstream gene9630050M13Rik, Nmt2, Rpp38, Acbd7, Olah, Meig1, Dclre1c, Suv39h2, Hspa14, Armetl1, LOC100040219, LOC666495, 3110001A13Rik, LOC100040257
Downstream geneLOC100040163, LOC666944, 1700080N15Rik, Frmd4a, EG634452, Prpf18, LOC623483, E130319B15Rik, LOC666973, Sephs1, Phyh, LOC381346, LOC100040250, LOC100040426, 1110017I16Rik, Mcm10, Optn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041K02.bB6Ng01-041K02.g
ACCDH868237DH868238
length688613
definitionDH868237|Mus musculus domesticus DNA, BAC clone: B6Ng01-041K02, 5' end.DH868238|Mus musculus domesticus DNA, BAC clone: B6Ng01-041K02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatttacttttggtcatttgggatgtgaggaaagttcattataa
accctgaataagtctgtcacagtcagagagagggaggagctaataccatg
gtgatggaactaagactttaactcttccaagaacacctccacctgccctc
ctgaccttttagccatttgtgcccccaaagaaatccatccgtagctgtca
gatcttcatgtgccaaacacatccagactccattaaaattcactcactct
cttgactttaaattccccctcttggccccctatttgtaacattttttacc
taagcttcagtaagccccactctagttgtgcctcagagcctttgaatcca
ggccttctgtcctgggctcatttggtgatgtgctctgttaagcctcattt
atttatgtgattctatcaagtcgtcttacatacacgtctcatttagagag
gctgtcttctcatttccaggaagctaccctgtctgttcaactcagttgta
agtttgttaaagccagtgatcagcctccatattccttatagtcagcaaat
aatagttaagaggaagatgtctaaatgagaaaaaatggcttagggaaaaa
gaatttgaggaagcttgtgcattccaaaaaaaggtcagacatctgaaagt
aactcatttcattcaattattacctttcattacaaaga
gaattctctgacactggatgtgtttggtattcttcctatcagataggtta
tactgcagcaggtaccagataggagccctctaaggagagcgagatgacag
gcagacagacagacagacagacatagacagatcaatcaataggactactg
acccacagcttgaagatactgtccctgaattgttaccactttcagatgcc
attgtgaagcttcagggtctaacctaatgggcagtacaccaacgttcctt
caatctcctcttcatttaatttgctagaacagctgtgggaacttgggaaa
gccctgtttatgtttacatatattttagaaaggatatcatgggaatctca
ataaatgccactcagagagaagcataaggcaaggcttatgggaagcacag
aacttctataccctctctgggtgagcaggctcctagaaatgtctctgtgt
gaagttctctgaatgctattcttttgggagttttaggaggctttcatagg
catggttgattaaattaggggcattggcaatcaacttaactttctgtctt
ctccctggacactgggaacacagtgggagttaaatatctcaatcctctaa
ctattccttgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_3943751_3944437
seq2: B6Ng01-041K02.b_33_720 (reverse)

seq1  TCTTTGTAATG-AAGGTAATAATTGAATGAAATGAGTTACTTTCAGATGT  49
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTAATGAAAGGTAATAATTGAATGAAATGAGTTACTTTCAGATGT  50

seq1  CTGACCTTTTTTTGGAATGCACAAGCTTCCTCAAATTCTTTTTCCCTAAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTTTTTTGGAATGCACAAGCTTCCTCAAATTCTTTTTCCCTAAG  100

seq1  CCATTTTTTCTCATTTAGACATCTTCCTCTTAACTATTATTTGCTGACTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTCTCATTTAGACATCTTCCTCTTAACTATTATTTGCTGACTA  150

seq1  TAAGGAATATGGAGGCTGATCACTGGCTTTAACAAACTTACAACTGAGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATATGGAGGCTGATCACTGGCTTTAACAAACTTACAACTGAGTT  200

seq1  GAACAGACAGGGTAGCTTCCTGGAAATGAGAAGACAGCCTCTCTAAATGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACAGGGTAGCTTCCTGGAAATGAGAAGACAGCCTCTCTAAATGA  250

seq1  GACGTGTATGTAAGACGACTTGATAGAATCACATAAATAAATGAGGCTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGTATGTAAGACGACTTGATAGAATCACATAAATAAATGAGGCTTA  300

seq1  ACAGAGCACATCACCAAATGAGCCCAGGACAGAAGGCCTGGATTCAAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCACATCACCAAATGAGCCCAGGACAGAAGGCCTGGATTCAAAGG  350

seq1  CTCTGAGGCACAACTAGAGTGGGGCTTACTGAAGCTTAGGTAAAAAATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGCACAACTAGAGTGGGGCTTACTGAAGCTTAGGTAAAAAATGT  400

seq1  TACAAATAGGGGGCCAAGAGGGGGAATTTAAAGTCAAGAGAGTGAGTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAGGGGGCCAAGAGGGGGAATTTAAAGTCAAGAGAGTGAGTGAA  450

seq1  TTTTAATGGAGTCTGGATGTGTTTGGCACATGAAGATCTGACAGCTACGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGGAGTCTGGATGTGTTTGGCACATGAAGATCTGACAGCTACGG  500

seq1  ATGGATTTCTTTGGGGGCACAAATGGCTAAAAGGTCAGGAGGGCAGGTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTCTTTGGGGGCACAAATGGCTAAAAGGTCAGGAGGGCAGGTGG  550

seq1  AGGTGTTCTTGGAAGAGTTAAAGTCTTAGTTCCATCACCATGGTATTAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTCTTGGAAGAGTTAAAGTCTTAGTTCCATCACCATGGTATTAGC  600

seq1  TCCTCCCTCTCTCTGACTGTGACAGACTTATTCAGGGTTTATAATGAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTCTCTCTGACTGTGACAGACTTATTCAGGGTTTATAATGAACT  650

seq1  TTCCTCACATCCCAAATGACCAAAAGTAAATAGAATTC  687
      ||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACATCCCAAATGACCAAAAGTAAATAGAATTC  688