BAC Information

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BAC

Clone NameB6Ng01-042M08
Chromosome2 (Build37)
Map Location 108,196,278 - 108,197,446
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043078, LOC668790, LOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042M08.bB6Ng01-042M08.g
ACCDH869042DH869043
length9261,171
definitionDH869042|Mus musculus domesticus DNA, BAC clone: B6Ng01-042M08, 5' end.DH869043|Mus musculus domesticus DNA, BAC clone: B6Ng01-042M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaactgaggaatattggatggctgagaagcatctaaagaaatg
tccaacaaccgtagtcatcagggaaatgcaaatcaaaacaacactgagat
tctacctcacaccagtcagaatggctagcaacaaaaactcaggtgacagt
agattctggcaagaatgtagagaaagaggacactcttccattgttggggt
gggggagggattgcaagctggtacaaccactctggaaatcagtctggaga
gtccttagaaaattggacatagtattaccttaggactcagatataccact
cctgggcatatactcaaaagatgctccagcatataacaaggatacatgct
ctaccttacttataatagccagaagctggaaagaatcctgatgtccttca
acagaggaatggatatagaaaatgtggtacatttacagcttggagtacta
ctactgtattaaaaacaatgacttcatgaaattcttaggcaaatggatcg
aattagaaaatatcatcctgagtgaggtaacccagtcacaaaagaataca
tatgaaatgcactcactgataagtagatattagcccaaaagctcaggata
cccaagtacaattcacagaccacatgaagctcaagaagaaggaagaccaa
attgtgggcgcttcagtccttcttagaaggaggaacaaaatactcaagtg
aggatatacagagacaatgtgtaaagcagagactgcatgaaaggacattc
atgtactgccccaccagaggatccatcccatttgcagatgccaaacccag
aaactacagaggataccaagaagtgcttactgactgttatagctgtttcc
tgacgagcttctgccagagccagacaaatatagaggcagatattcatagc
caaccattggacggagcatgggtttt

gaattcacacccaacgtgacccggagatggtgcccactggaagagacttg
agcccctggtcagcgggttttctgcttccctcctgctggcacagacctgt
catgtttgatttggaatagatgttatattccactcaccagtgatcctaag
atcacgtggagagttctctggggacattgtgggaccatccactgagatca
taaccaaggtgacccagagctagtgtcaataggaatggacttgagtccct
tgtcaggagggcttcctgcatccctgcagctggcactggcctgtcacgat
tggtttggaacagatgttgtgttccactcactagtgatcctaagatcaca
tggagagtcctctggggaccatccgctgagttcatgcccaaggtgacctg
gaactggtgctgaccagaacagctatattgacttttaatcattgttttct
tgaccacggttctccctgtcacttaagaggcactaatgttatagaagcag
aagaatattaattgaatacaagccacaaacaaagtattacaaatacttat
gtgttaaataccttttgttatacctcaaatagaagccagggaaatgaagc
ctaattggtatttttaaaataggtgagcagtatggcagaaagatgaaggg
ccaacattcaacagagtgaagaattatgggagtcaaagcaacatgcagaa
tcataactctaaaacgttttcaatgctaatacttataaaacaccaaggaa
aaatttagtcccttatttaattagactggtcttttatgttttaatctcgt
tttgatgctttcataatttaatttcatgtaaaaacaagtttaatataatc
ttttcatgttcttttgcattttatttctaagtctcaaagtcatagaaaga
agatttatgtttcaattcctcttcattcaaattacttcctatcctttaca
acattttgtatttcttactcttgctatgcataaggatttgtaaacgtatg
gtctatcatggctcatataatgatgacattactttgttaggactattcgt
tcactagtagaggagattataagaaattggggagaccctgttcctagaac
ctttagcctgcccagcctgtgtatggcagcccttaaggctgagaagaacg
tggttgtcagagatctcgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108196278_108197446
seq2: B6Ng01-042M08.g_66_1236 (reverse)

seq1  TCAC-AGATCTCTGACAA-CACGTTCTTCTCAG-CTTTAGGGCTGCAATA  47
      |||| ||||||||||||| |||||||||||||| ||| |||||||| |||
seq2  TCACGAGATCTCTGACAACCACGTTCTTCTCAGCCTTAAGGGCTGCCATA  50

seq1  CA-AGGCTTGGGCA-GCTAAAGG-TCTAGGAACAGTGTCT-CCCAATTTC  93
      || |||| |||||| |||||||| ||||||||||| |||| |||||||||
seq2  CACAGGC-TGGGCAGGCTAAAGGTTCTAGGAACAGGGTCTCCCCAATTTC  99

seq1  TTAATATCTTCTTCTACTAGTTGAACGAATAGT-CTAACAAAGTAATGTC  142
      |||  ||| || |||||||| |||||||||||| ||||||||||||||||
seq2  TTATAATC-TCCTCTACTAG-TGAACGAATAGTCCTAACAAAGTAATGTC  147

seq1  ATCATTTATATGAGCCATGATAGACCATACGTTTACAAATCCTTATGCAT  192
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCA-TTATATGAGCCATGATAGACCATACGTTTACAAATCCTTATGCAT  196

seq1  AGCAAGAGTAAGAAATACAAAATGTTTGTAAAGGATAGGAAGTAATTTGA  242
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGCAAGAGTAAGAAATACAAAATG-TTGTAAAGGATAGGAAGTAATTTGA  245

seq1  ATGAAGAGGAATTGAAACATAAATCTTCTTTCTATTGACTTTGAGACTTA  292
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGAAGAGGAATTGAAACATAAATCTTCTTTCTA-TGACTTTGAGACTTA  294

seq1  GAAATAAAATGCAAAAGAACATGAAAAGATTATATTAAACTTGTTTTTAC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAATGCAAAAGAACATGAAAAGATTATATTAAACTTGTTTTTAC  344

seq1  ATGAAATTAAATTATGAAAGCATCAAAACGAGATTAAAACATAAAAGACC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTAAATTATGAAAGCATCAAAACGAGATTAAAACATAAAAGACC  394

seq1  AGTCTAATTAAATAAGGGACTAAATTTTTCCTTGGTGTTTTATAAGTATT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAATTAAATAAGGGACTAAATTTTTCCTTGGTGTTTTATAAGTATT  444

seq1  AGCATTGAAAACGTTTTAGAGTTATGATTCTGCATGTTGCTTTGACTCCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGAAAACGTTTTAGAGTTATGATTCTGCATGTTGCTTTGACTCCC  494

seq1  ATAATTCTTCACTCTGTTGAATGTTGGCCCTTCATCTTTCTGCCATACTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTTCACTCTGTTGAATGTTGGCCCTTCATCTTTCTGCCATACTG  544

seq1  CTCACCTATTTTAAAAATACCAATTAGGCTTCATTTCCCTGGCTTCTATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTATTTTAAAAATACCAATTAGGCTTCATTTCCCTGGCTTCTATT  594

seq1  TGAGGTATAACAAAAGGTATTTAACACATAAGTATTTGTAATACTTTGTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATAACAAAAGGTATTTAACACATAAGTATTTGTAATACTTTGTT  644

seq1  TGTGGCTTGTATTCAATTAATATTCTTCTGCTTCTATAACATTAGTGCCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTGTATTCAATTAATATTCTTCTGCTTCTATAACATTAGTGCCT  694

seq1  CTTAAGTGACAGGGAGAACCGTGGTCAAGAAAACAATGATTAAAAGTCAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTGACAGGGAGAACCGTGGTCAAGAAAACAATGATTAAAAGTCAA  744

seq1  TATAGCTGTTCTGGTCAGCACCAGTTCCAGGTCACCTTGGGCATGAACTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTGTTCTGGTCAGCACCAGTTCCAGGTCACCTTGGGCATGAACTC  794

seq1  AGCGGATGGTCCCCAGAGGACTCTCCATGTGATCTTAGGATCACTAGTGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGATGGTCCCCAGAGGACTCTCCATGTGATCTTAGGATCACTAGTGA  844

seq1  GTGGAACACAACATCTGTTCCAAACCAATCGTGACAGGCCAGTGCCAGCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACACAACATCTGTTCCAAACCAATCGTGACAGGCCAGTGCCAGCT  894

seq1  GCAGGGATGCAGGAAGCCCTCCTGACAAGGGACTCAAGTCCATTCCTATT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGATGCAGGAAGCCCTCCTGACAAGGGACTCAAGTCCATTCCTATT  944

seq1  GACACTAGCTCTGGGTCACCTTGGTTATGATCTCAGTGGATGGTCCCACA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAGCTCTGGGTCACCTTGGTTATGATCTCAGTGGATGGTCCCACA  994

seq1  ATGTCCCCAGAGAACTCTCCACGTGATCTTAGGATCACTGGTGAGTGGAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCCAGAGAACTCTCCACGTGATCTTAGGATCACTGGTGAGTGGAA  1044

seq1  TATAACATCTATTCCAAATCAAACATGACAGGTCTGTGCCAGCAGGAGGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATCTATTCCAAATCAAACATGACAGGTCTGTGCCAGCAGGAGGG  1094

seq1  AAGCAGAAAACCCGCTGACCAGGGGCTCAAGTCTCTTCCAGTGGGCACCA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAAACCCGCTGACCAGGGGCTCAAGTCTCTTCCAGTGGGCACCA  1144

seq1  TCTCCGGGTCACGTTGGGTGTGAATTC  1169
      |||||||||||||||||||||||||||
seq2  TCTCCGGGTCACGTTGGGTGTGAATTC  1171


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