BAC Information

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BAC

Clone NameB6Ng01-044C21
Chromosome2 (Build37)
Map Location 77,179,381 - 77,321,977
singlet/doubletdoublet
Overlap geneZfp533
Upstream geneCyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneBC003993, LOC667920, OTTMUSG00000016703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044C21.bB6Ng01-044C21.g
ACCDH870008DH870009
length2041,115
definitionDH870008|Mus musculus domesticus DNA, BAC clone: B6Ng01-044C21, 5' end.DH870009|Mus musculus domesticus DNA, BAC clone: B6Ng01-044C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,179,381 - 77,179,584)(77,320,859 - 77,321,977)
sequence
gaattctacttgctttccatttaataggtccttgtacctattaatgggaa
aatactgaagaattctttagggtggtgacgccatatctcaaagtgttcaa
gtcatttggctgaaacagcctattgatgttttagacaggaacacggatgt
gctttgtccctttcacttcgattgtgtgggaatgtgtatgaggaggggtg
tgtg
gaattctagaaaaactaccagaaaatgcaggcgagtcgtctttacaaaaa
tgtttcttcaaaatagatgaagactatttttttttccttatgccaagcca
tctttgtccgtggacttgtgcctgttggctctcagagcccctacgcatac
aggactgaggaagagaccaggccatctaaaggaggtgatttgcttcttga
cactttcatcctcatatgtaatgaattttagccatttttacccatcaccc
cctcttgtgtcctctcccccactgacacatgtgttcccaagaaactctcc
ttggattttcatgtctctctttttttttaaagtaacttgagagggatatt
gctcttcaataaagcagccaccacttttaaatgtgtcatttcatgaatat
ttgaaatgtaatgagactctttgtcacatattttccccctaagtctgctc
ctgagaaagaaagggatgaaaaggagtggctattctctgtgtgctacagt
aatttgataatgtcacagttcaaaggctgatgcgtagccaaacttccaga
aggccctaaaccacagggtttagtagctgaagtcctctttgttgtagtaa
agggaagacaggtgcaaaagatgactgcccctgctaactagtaatccctt
aagtatttttagagtgtttgtctacgtgctgtttgaatagctatgattcg
gaaagagggcagaaaatcccaagttttatatggttttccaaaagttactc
aataaaaaaagtgggggagggtatattaagagcagaatcaagaagagaaa
agtctttctcttctttctggagacacttgcatgggtagatgcctcttgga
ttctggctctagactcatgctgtgccatggtgttgtgtggtcccattgcc
ctctgcactgtccctccactagggtaagtgtggagagagagcttgctaaa
gcttgacgcttgactccagaacttgaagaaataagggtggtcagtgatgg
tcttttctcaaagtcctgggttcttctgtgttggcaaaaatccttagtga
tccacttaaccttctcggtggaaggcactgagtccccttccgggtgccta
gtgagtaagtctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77179381_77179584
seq2: B6Ng01-044C21.b_41_244

seq1  GAATTCTACTTGCTTTCCATTTAATAGGTCCTTGTACCTATTAATGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTGCTTTCCATTTAATAGGTCCTTGTACCTATTAATGGGAA  50

seq1  AATACTGAAGAATTCTTTAGGGTGGTGACGCCATATCTCAAAGTGTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGAAGAATTCTTTAGGGTGGTGACGCCATATCTCAAAGTGTTCAA  100

seq1  GTCATTTGGCTGAAACAGCCTATTGATGTTTTAGACAGGAACACGGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGGCTGAAACAGCCTATTGATGTTTTAGACAGGAACACGGATGT  150

seq1  GCTTTGTCCCTTTCACTTCGATTGTGTGGGAATGTGTATGAGGAGGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTCCCTTTCACTTCGATTGTGTGGGAATGTGTATGAGGAGGGGTG  200

seq1  TGTG  204
      ||||
seq2  TGTG  204

seq1: chr2_77320859_77321977
seq2: B6Ng01-044C21.g_67_1181 (reverse)

seq1  TGGAGACTTACTCAACCTAGGGCACACGGAAGGGTGAACTCAGTGCCCTC  50
      ||||||||||||||  ||| ||||| |||||||  | |||||||||| ||
seq2  TGGAGACTTACTCA--CTA-GGCACCCGGAAGG--GGACTCAGTGCCTTC  45

seq1  CACC-AGAAGGTAAAGTGGATCACTTAGGATTTTCTGCC-ACACAGAAGA  98
      |||| ||||||| |||||||||||| |||||||| |||| ||||||||||
seq2  CACCGAGAAGGTTAAGTGGATCACTAAGGATTTT-TGCCAACACAGAAGA  94

seq1  ACCCAGGACTCTGAG-AAAGACCATCACTGACCACCCTTATGTTCTCAAG  147
      |||||||||| |||| ||||||||||||||||||||||||| |  |||||
seq2  ACCCAGGACTTTGAGAAAAGACCATCACTGACCACCCTTATTTCTTCAAG  144

seq1  TTCTGGAGTCAGGCGTCAAGCTTTAGCAAGGCTCTCTCTCCACACTTACC  197
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  TTCTGGAGTCAAGCGTCAAGCTTTAGCAA-GCTCTCTCTCCACACTTACC  193

seq1  CTAGTGGAGGGACAGTGCAGAGGGCAATGGGACCACACAACACCATGGCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGAGGGACAGTGCAGAGGGCAATGGGACCACACAACACCATGGCA  243

seq1  CAGCATGAGTCTAGAGCCAGAATCCAAGAGGCATCTACCCATGCAAGTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGAGTCTAGAGCCAGAATCCAAGAGGCATCTACCCATGCAAGTGT  293

seq1  CTCCAGAAAGAAGAGAAAGACTTTTCTCTTCTTGATTCTGCTCTTAATAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAAGAAGAGAAAGACTTTTCTCTTCTTGATTCTGCTCTTAATAT  343

seq1  ACCCTCCCCCACTTTTTTTATTGAGTAACTTTTGGAAAACCATATAAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCCCCACTTTTTTTATTGAGTAACTTTTGGAAAACCATATAAAAC  393

seq1  TTGGGATTTTCTGCCCTCTTTCCGAATCATAGCTATTCAAACAGCACGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATTTTCTGCCCTCTTTCCGAATCATAGCTATTCAAACAGCACGTA  443

seq1  GACAAACACTCTAAAAATACTTAAGGGATTACTAGTTAGCAGGGGCAGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACACTCTAAAAATACTTAAGGGATTACTAGTTAGCAGGGGCAGTC  493

seq1  ATCTTTTGCACCTGTCTTCCCTTTACTACAACAAAGAGGACTTCAGCTAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGCACCTGTCTTCCCTTTACTACAACAAAGAGGACTTCAGCTAC  543

seq1  TAAACCCTGTGGTTTAGGGCCTTCTGGAAGTTTGGCTACGCATCAGCCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCTGTGGTTTAGGGCCTTCTGGAAGTTTGGCTACGCATCAGCCTT  593

seq1  TGAACTGTGACATTATCAAATTACTGTAGCACACAGAGAATAGCCACTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTGACATTATCAAATTACTGTAGCACACAGAGAATAGCCACTCC  643

seq1  TTTTCATCCCTTTCTTTCTCAGGAGCAGACTTAGGGGGAAAATATGTGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCCCTTTCTTTCTCAGGAGCAGACTTAGGGGGAAAATATGTGAC  693

seq1  AAAGAGTCTCATTACATTTCAAATATTCATGAAATGACACATTTAAAAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCTCATTACATTTCAAATATTCATGAAATGACACATTTAAAAGT  743

seq1  GGTGGCTGCTTTATTGAAGAGCAATATCCCTCTCAAGTTACTTTAAAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGCTTTATTGAAGAGCAATATCCCTCTCAAGTTACTTTAAAAAA  793

seq1  AAAGAGAGACATGAAAATCCAAGGAGAGTTTCTTGGGAACACATGTGTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGACATGAAAATCCAAGGAGAGTTTCTTGGGAACACATGTGTCA  843

seq1  GTGGGGGAGAGGACACAAGAGGGGGTGATGGGTAAAAATGGCTAAAATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGAGAGGACACAAGAGGGGGTGATGGGTAAAAATGGCTAAAATTC  893

seq1  ATTACATATGAGGATGAAAGTGTCAAGAAGCAAATCACCTCCTTTAGATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATATGAGGATGAAAGTGTCAAGAAGCAAATCACCTCCTTTAGATG  943

seq1  GCCTGGTCTCTTCCTCAGTCCTGTATGCGTAGGGGCTCTGAGAGCCAACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTCTTCCTCAGTCCTGTATGCGTAGGGGCTCTGAGAGCCAACA  993

seq1  GGCACAAGTCCACGGACAAAGATGGCTTGGCATAAGGAAAAAAAAATAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGTCCACGGACAAAGATGGCTTGGCATAAGGAAAAAAAAATAGT  1043

seq1  CTTCATCTATTTTGAAGAAACATTTTTGTAAAGACGACTCGCCTGCATTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTATTTTGAAGAAACATTTTTGTAAAGACGACTCGCCTGCATTT  1093

seq1  TCTGGTAGTTTTTCTAGAATTC  1119
      ||||||||||||||||||||||
seq2  TCTGGTAGTTTTTCTAGAATTC  1115