BAC Information

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BAC

Clone NameB6Ng01-045N07
Chromosome2 (Build37)
Map Location 82,619,163 - 82,620,192
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
Downstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045N07.b
ACCDH871172
length1,036
definitionDH871172|Mus musculus domesticus DNA, BAC clone: B6Ng01-045N07, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatggtctgtgtttatatctgcagaaaaattgtgaccatagt
ttctaagaaaagtactgagtgtttttgacaataacataacatgtttttag
aatttcatgtttaaaacttatatccttttctacattatttatacatgaag
gtgtgcttatcattgcattcagacagaacaataaaatgtttcttactagt
cacacatcttctgatagaggcttagataaatttaaggagaaagaaggaaa
tcagatagggacacatattcttgacttaaatactgatccaaattgaaaat
aatgccttattacttgtgacaaaggtgaatagtttattctgcaccaagat
taaaatttatctagaggaaattcttacaataatgttgctttcagtacatc
ttactatatgaatgcaaaatagataaatatttacttgtatacatgtaagt
agttctcacagcagcacaaggatactgatttgtctctggtgtttttatac
attttaatagtcttgctggtataaaattactatatgttaccctttattat
aaccatacagtagtgccacaagtggtggcatttctgtcaaaacattgtaa
aatgtagccaaaaataaataaaaaataaaggtaataacacattccccagg
cactaaagagaaagctgagagaggaaggtctgctttcagtgtatcatgac
agaccccagcagggttcttcacagggagtgcgacaaagcatatttcagct
gaagcaatgagctttaataggaaaaaccattttacacataaatacatagt
atgtgataatcacaattctatttattcaacagctggatctccggattaga
acgaagtgacagagctcagagaattgtgttcctacagagtaagaaaaatc
ctattagccttctaatgacctatacttccttgggctttcagtctaaacaa
gacatatcctgctgttattgtttatttatgtgtagatcaatgtgagaatg
gatagataagtatatatatcattaattagatagatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82619163_82620192
seq2: B6Ng01-045N07.b_48_1060

seq1  GAATTCTCTATGGTCTGTGTTTATATCTGCAGAAAAATTGTGACCATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGGTCTGTGTTTATATCTGCAGAAAAATTGTGACCATAGT  50

seq1  TTCTAAGAAAAGTACTGAGTGTTTTTGACAATAACATAACATGTTTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGAAAAGTACTGAGTGTTTTTGACAATAACATAACATGTTTTTAG  100

seq1  AATTTCATGTTTAAAACTTATATCCTTTTCTACATTATTTATACATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATGTTTAAAACTTATATCCTTTTCTACATTATTTATACATGAAG  150

seq1  GTGTGCTTATCATTGCATTCAGACAGAACAATAAAATGTTTCTTACTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTATCATTGCATTCAGACAGAACAATAAAATGTTTCTTACTAGT  200

seq1  CACACATCTTCTGATAGAGGCTTAGATAAATTTAAGGAGAAAGAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCTTCTGATAGAGGCTTAGATAAATTTAAGGAGAAAGAAGGAAA  250

seq1  TCAGATAGGGACACATATTCTTGACTTAAATACTGATCCAAATTGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGGGACACATATTCTTGACTTAAATACTGATCCAAATTGAAAAT  300

seq1  AATGCCTTATTACTTGTGACAAAGGTGAATAGTTTATTCTGCACCAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTTATTACTTGTGACAAAGGTGAATAGTTTATTCTGCACCAAGAT  350

seq1  TAAAATTTATCTAGAGGAAATTCTTACAATAATGTTGCTTTCAGTACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTATCTAGAGGAAATTCTTACAATAATGTTGCTTTCAGTACATC  400

seq1  TTACTATATGAATGCAAAATAGATAAATATTTACTTGTATACATGTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATATGAATGCAAAATAGATAAATATTTACTTGTATACATGTAAGT  450

seq1  AGTTCTCACAGCAGCACAAGGATACTGATTTGTCTCTGGTGTTTTTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCACAGCAGCACAAGGATACTGATTTGTCTCTGGTGTTTTTATAC  500

seq1  ATTTTAATAGTCTTGCTGGTATAAAATTACTATATGTTACCCTTTATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATAGTCTTGCTGGTATAAAATTACTATATGTTACCCTTTATTAT  550

seq1  AACCATACAGTAGTGCCACAAGTGGTGGCATTTCTGTCAAAACATTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACAGTAGTGCCACAAGTGGTGGCATTTCTGTCAAAACATTGTAA  600

seq1  AATGTAGCCAAAAATAAATAAAAAATAAAGGTAATAACACATTCCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGCCAAAAATAAATAAAAAATAAAGGTAATAACACATTCCCCAGG  650

seq1  CACTAAAGAGAAAGCTGAAAGAGGAAGGTCTGCTTTCAGTGTATCATGAC  700
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CACTAAAGAGAAAGCTGAGAGAGGAAGGTCTGCTTTCAGTGTATCATGAC  700

seq1  AGACCCCAGCAGGGTTCTTCACAGGGAGTGCGACAAAGCATATTTCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCAGCAGGGTTCTTCACAGGGAGTGCGACAAAGCATATTTCAGCT  750

seq1  GAAGCAATGAGCTTTAATAGGAAAAACCATTTTACACATAAATACATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAATGAGCTTTAATAGGAAAAACCATTTTACACATAAATACATAGT  800

seq1  ATGTGATAATCACAATTCTATTTATTCAACAGCTGGATCTCCGGATTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATAATCACAATTCTATTTATTCAACAGCTGGATCTCCGGATTAGA  850

seq1  ACGAAGGTGACAGAGCTCAGAGAATTGTGTTCCTACAGAGTAAGAAAAAT  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAA-GTGACAGAGCTCAGAGAATTGTGTTCCTACAGAGTAAGAAAAAT  899

seq1  CCTATTAGCCTTCTAATGACCTATACTTCCTTGGGCTTTCAGTCTAAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTATTAGCCTTCTAATGACCTATACTTCCTTGGGCTTTCAGTCT-AAAC  948

seq1  ACAGACATATCCTGCTGTTTATTTTGTTTTATTTTATGTGTTAGATTCAA  1000
      | ||||||||||||||||   | ||||||   |||||||| |||||    
seq2  A-AGACATATCCTGCTGT---TATTGTTT--ATTTATGTG-TAGAT---C  988

seq1  AATGTGAAGGAAAATGGATAGATACAGTAT  1030
      |||||    || |||||||||||| |||||
seq2  AATGT----GAGAATGGATAGATA-AGTAT  1013