BAC Information

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BAC

Clone NameB6Ng01-045P06
Chromosome2 (Build37)
Map Location 142,351,688 - 142,494,743
singlet/doubletdoublet
Overlap geneLOC668913, LOC668914, Kif16b
Upstream genenone
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P06.bB6Ng01-045P06.g
ACCDH871256DH871257
length1,107977
definitionDH871256|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P06, 5' end.DH871257|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,351,688 - 142,352,801)(142,493,773 - 142,494,743)
sequence
gaattcaggggagtcttaggaaggggccctggagatcatcttcctgacag
gttcctctgtttgtcttcatgccccatgagcaggaaaataagatcattta
attggacggcgcctgctttcttctcattttctttttcatcctagtctttt
tcagcatttctctagaagctatgaacccggccggggtcgatggaagttgt
gtggacattaaatcagtttgatataaaagttctggaaaccatgagagttg
gggcatataagagttgctcaaaatgaggcatcccttctcagttcttctac
tgtgcagcagctggattctaagatgctccaactctggttgtattggtggt
ttgctagtttcttgttagtcttacttttctgttaatcccagatccttcca
gacttctgaaatgtctttgtttagcaaacagagctgaacgatctgctgat
gagccaaaacctcttcacgcctcagacttttccctctacctttcatggat
tatcataccatttttgttttgttttgttgccgatttcttataactagata
tggatgtaggcagggagttgggagaagatcctagtggtagcatgtgtgcc
cattttgtccatgatgggaaattatggtccaaaaatgagatgcaagatta
attcagatctagccatcagtggtagactgtttccatatgccacagcaatg
cctccaccgtggctgctccattgtgactctttccattgagatggggtgta
tattttctcccttgtggtggggcttgccacaataaaaaaaatgaaaataa
gtgatttctggaggtgtggaaggccagttagtgttcatgaaagatactgg
cttaaatagtaattgctaattttagtgttggcatagtatactttatatgg
ctttgatagcatgccattttattttttttctcagctagttaatttgttca
tgagacttgattacatgacagaattttgaatacaaactcaatacctctga
actagttagatcactaaccatcagtttgatctggtatgccagaaggaaat
tacttttagttatctcccaatattcatgaacatggcaatgtaacacacag
ttcattc
gaattctctttgatggacacgagtttcatagatatgtgaggatgtatttt
ctttaccccactccatcaccacattgggctcatttttctgtagagttaga
aaactattcttatcttcacctatgttcaatgataaggtttcagaatgata
cacatgcactaagtttactctttacaatgctccaacattttgattgagtt
ggaagaaagttgaaaagtacagtggaattcaaaatatatggaatctgtaa
tacactcgctaagataatcttttgacaccttaaaacttcagttttagtta
cagcctgtaatcttttggaactttgtctaaaattacatcctgttctttca
cattcccttctggagtatgttctcttgggcacagactccaaaatagttgg
atgtgacagttccttttatggagattttgatgaggttgtttcagtgcttc
tttttggtttcaaataatagatcctaagtccgtgctttagagattgagaa
aggtaaacgaaaccaaagtttgcctggttttggtagaggtgaggattgag
gttcttccagccctgatttgaatgaaatttttgaatgaaacttactattt
agacaagactggcctcaaactcatggtcatctacttgactctgcctccca
agtactgggattaaaggtatgcatcactatacatggtaaatatgaccagt
cttctcttgaaggttgtcttaatctaagcctttcagtatctgttttgcag
tatctatcttataactttaagttcaacaggctcccatggactaccacagc
atcagccccagccttcgcacttctcattgtccatcagggtaggaactcca
gaactcttatagcaatttgttgcagaaggcttgtcctagaacttgccctt
tagccccacattttacaggtgaatgcccccctacctgaagtgatgggtag
ataatggatattctctggcctgtctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142351688_142352801
seq2: B6Ng01-045P06.b_46_1152

seq1  GAATTCAGGGGAGTCTTAGGAAGGGGCCCTGGAGATCATCTTCCTGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGAGTCTTAGGAAGGGGCCCTGGAGATCATCTTCCTGACAG  50

seq1  GTTCCTCTGTTTGTCTTCATGCCCCATGAGCAGGAAAATAAGATCATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCTGTTTGTCTTCATGCCCCATGAGCAGGAAAATAAGATCATTTA  100

seq1  ATTGGACGGCGCCTGCTTTCTTCTCATTTTCTTTTTCATCCTAGTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACGGCGCCTGCTTTCTTCTCATTTTCTTTTTCATCCTAGTCTTTT  150

seq1  TCAGCATTTCTCTAGAAGCTATGAACCCGGCCGGGGTCGATGGAAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATTTCTCTAGAAGCTATGAACCCGGCCGGGGTCGATGGAAGTTGT  200

seq1  GTGGACATTAAATCAGTTTGATATAAAAGTTCTGGAAACCATGAGAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACATTAAATCAGTTTGATATAAAAGTTCTGGAAACCATGAGAGTTG  250

seq1  GGGCATATAAGAGTTGCTCAAAATGAGGCATCCCTTCTCAGTTCTTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAAGAGTTGCTCAAAATGAGGCATCCCTTCTCAGTTCTTCTAC  300

seq1  TGTGCAGCAGCTGGATTCTAAGATGCTCCAACTCTGGTTGTATTGGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCAGCTGGATTCTAAGATGCTCCAACTCTGGTTGTATTGGTGGT  350

seq1  TTGCTAGTTTCTTGTTAGTCTTACTTTTCTGTTAATCCCAGATCCTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGTTTCTTGTTAGTCTTACTTTTCTGTTAATCCCAGATCCTTCCA  400

seq1  GACTTCTGAAATGTCTTTGTTTAGCAAACAGAGCTGAACGATCTGCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGAAATGTCTTTGTTTAGCAAACAGAGCTGAACGATCTGCTGAT  450

seq1  GAGCCAAAACCTCTTCACGCCTCAGACTTTTCCCTCTACCTTTCATGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAAACCTCTTCACGCCTCAGACTTTTCCCTCTACCTTTCATGGAT  500

seq1  TATCATACCATTTTTGTTTTGTTTTGTTGCCGATTTCTTATAACTAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATACCATTTTTGTTTTGTTTTGTTGCCGATTTCTTATAACTAGATA  550

seq1  TGGATGTAGGCAGGGAGTTGGGAGAAGATCCTAGTGGTAGCATGTGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTAGGCAGGGAGTTGGGAGAAGATCCTAGTGGTAGCATGTGTGCC  600

seq1  CATTTTGTCCATGATGGGAAATTATGGTCCAAAAATGAGATGCAAGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTCCATGATGGGAAATTATGGTCCAAAAATGAGATGCAAGATTA  650

seq1  ATTCAGATCTAGCCATCAGTGGTAGACTGTTTCCATATGCCACAGCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATCTAGCCATCAGTGGTAGACTGTTTCCATATGCCACAGCAATG  700

seq1  CCTCCACCGTGGCTGCTCCATTGTGACTCTTTCCATTGAGATGGGGTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCGTGGCTGCTCCATTGTGACTCTTTCCATTGAGATGGGGTGTA  750

seq1  TATTTTCTCCCTTGTGGTGGGGCTTGCCACAATAAAAAAAAATGAAAATA  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATTTTCTCCCTTGTGGTGGGGCTTGCCACAAT-AAAAAAAATGAAAATA  799

seq1  AGTGATTTCTGGAGGTGTGGAAGGCCAGTCAGTGTTCATGAAAGATACTG  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGTGATTTCTGGAGGTGTGGAAGGCCAGTTAGTGTTCATGAAAGATACTG  849

seq1  GCTTAAATAGTAATTGCTAATTTTAGTGTTGGCATAGTATACTTTATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATAGTAATTGCTAATTTTAGTGTTGGCATAGTATACTTTATATG  899

seq1  GCTTTGATAGCATGCCATTTTA-TTTTTTTCTCAGCTAGTTAATTTGTTC  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTTTGATAGCATGCCATTTTATTTTTTTTCTCAGCTAGTTAATTTGTTC  949

seq1  ATGAAGACTTGATTACATGACAGAATTTTGAATACAAACTCAATACCTCT  999
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATG-AGACTTGATTACATGACAGAATTTTGAATACAAACTCAATACCTCT  998

seq1  GAACTAGTTAGATCCAACTAAACCATCAGTTTGATCTTGGTATGCAGGAA  1049
      ||||||||||||||  ||| |||||||||||||||| ||||||||  |||
seq2  GAACTAGTTAGATC--ACT-AACCATCAGTTTGATC-TGGTATGCCAGAA  1044

seq1  GGAAATTACTTTTAGTTAATCTCCCATATATTCATGAACATGGCAATGTA  1099
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  GGAAATTACTTTTAGTT-ATCTCCCA-ATATTCATGAACATGGCAATGTA  1092

seq1  ACACACAGTTCATTC  1114
      |||||||||||||||
seq2  ACACACAGTTCATTC  1107

seq1: chr2_142493773_142494743
seq2: B6Ng01-045P06.g_70_1046 (reverse)

seq1  GGAGCCAGGCCAGAG-ATACTCATTATCTACCCATCAC-TCAAGTGTGGG  48
      |||| |||||||||| |||  ||||||||||||||||| ||| ||  |||
seq2  GGAGACAGGCCAGAGAATATCCATTATCTACCCATCACTTCAGGTAGGGG  50

seq1  GGCCTTCACCTGTAAAATGTGGGGCTAAAGGGCCAGCTACTA-GAC-AGC  96
      ||| ||||||||||||||||||||||||||||| || | ||| ||| |||
seq2  GGCATTCACCTGTAAAATGTGGGGCTAAAGGGCAAG-TTCTAGGACAAGC  99

seq1  CTCCTGC-ACCAATTGCTAT-AGAGTTCTGGAGTTTCTACCCTGATGGAC  144
      || |||| || ||||||||| |||||||||||||| ||||||||||||||
seq2  CTTCTGCAACAAATTGCTATAAGAGTTCTGGAGTTCCTACCCTGATGGAC  149

seq1  AATGAGAGGTGCGAAGGCTGGGGCTTGATGCTGTGGTAGTCCATGGGAGC  194
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  AATGAGAAGTGCGAAGGCTGGGGC-TGATGCTGTGGTAGTCCATGGGAGC  198

seq1  CTGTTGAGCTTAAAGTTAT-AGATAGATACTGC-AAACAGATACCTGAAA  242
      ||||||| ||||||||||| ||||||||||||| ||||||||| ||||||
seq2  CTGTTGAACTTAAAGTTATAAGATAGATACTGCAAAACAGATA-CTGAAA  247

seq1  GGCTTAGATTAAGACAACCTTC-AGAGAAGACTGGTCATATTTACCATGT  291
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGCTTAGATTAAGACAACCTTCAAGAGAAGACTGGTCATATTTACCATGT  297

seq1  ATAGTGATGCATACCTTTAATCCCAGTACTTGGGAGGCAGAGTCAAGTAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATGCATACCTTTAATCCCAGTACTTGGGAGGCAGAGTCAAGTAG  347

seq1  ATGACCATGAGTTTGAGGCCAGTCTTGTCTAAATAGTAAGTTTCATTCAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCATGAGTTTGAGGCCAGTCTTGTCTAAATAGTAAGTTTCATTCAA  397

seq1  AAATTTCATTCAAATCAGGGCTGGAAGAACCTCAATCCTCACCTCTACCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATTCAAATCAGGGCTGGAAGAACCTCAATCCTCACCTCTACCA  447

seq1  AAACCAGGCAAACTTTGGTTTCGTTTACCTTTCTCAATCTCTAAAGCACG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGGCAAACTTTGGTTTCGTTTACCTTTCTCAATCTCTAAAGCACG  497

seq1  GACTTAGGATCTATTATTTGAAACCAAAAAGAAGCACTGAAACAACCTCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGGATCTATTATTTGAAACCAAAAAGAAGCACTGAAACAACCTCA  547

seq1  TCAAAATCTCCATAAAAGGAACTGTCACATCCAACTATTTTGGAGTCTGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTCCATAAAAGGAACTGTCACATCCAACTATTTTGGAGTCTGT  597

seq1  GCCCAAGAGAACATACTCCAGAAGGGAATGTGAAAGAACAGGATGTAATT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGAGAACATACTCCAGAAGGGAATGTGAAAGAACAGGATGTAATT  647

seq1  TTAGACAAAGTTCCAAAAGATTACAGGCTGTAACTAAAACTGAAGTTTTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAAAGTTCCAAAAGATTACAGGCTGTAACTAAAACTGAAGTTTTA  697

seq1  AGGTGTCAAAAGATTATCTTAGCGAGTGTATTACAGATTCCATATATTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCAAAAGATTATCTTAGCGAGTGTATTACAGATTCCATATATTTT  747

seq1  GAATTCCACTGTACTTTTCAACTTTCTTCCAACTCAATCAAAATGTTGGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGTACTTTTCAACTTTCTTCCAACTCAATCAAAATGTTGGA  797

seq1  GCATTGTAAAGAGTAAACTTAGTGCATGTGTATCATTCTGAAACCTTATC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTAAAGAGTAAACTTAGTGCATGTGTATCATTCTGAAACCTTATC  847

seq1  ATTGAACATAGGTGAAGATAAGAATAGTTTTCTAACTCTACAGAAAAATG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACATAGGTGAAGATAAGAATAGTTTTCTAACTCTACAGAAAAATG  897

seq1  AGCCCAATGTGGTGATGGAGTGGGGTAAAGAAAATACATCCTCACATATC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAATGTGGTGATGGAGTGGGGTAAAGAAAATACATCCTCACATATC  947

seq1  TATGAAACTCGTGTCCATCAAAGAGAATTC  971
      ||||||||||||||||||||||||||||||
seq2  TATGAAACTCGTGTCCATCAAAGAGAATTC  977