BAC Information

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BAC

Clone NameB6Ng01-045P23
Chromosome2 (Build37)
Map Location 118,170,209 - 118,171,250
singlet/doubletsinglet
Overlap geneGpr176
Upstream geneThbs1, Fsip1, 1700054M17Rik
Downstream geneEif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P23.b
ACCDH871290
length1,031
definitionDH871290|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P23, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctattctgttttttaatcctttcttaagcagataagctttggaa
accattttggctttggaaaagagcaccgacagcattcgttcgtactgtgg
aatttgcagaaaaggggtagtactttgttttcccaaaggaagccaccagc
gagttgcagaacctctgatttcagactgtctggtcaatccagttaggggg
agaggggtagtctgagtcactggtaaagaataggtttgatagttgtgata
gttactgttgttgatctggattctctagactgtctctgagcatgcccatg
agggattatgcagactagggtaattgagtgacagcaacccatgagtttgg
gttctggacttttttaaaagcagaagcagttaagcaaggcattatttatt
gctttttccctcccgactgtgattgcaatgtgacccacagcaatttcctt
gccatgttagattctacccttgaactctgagcccaaacaaacgcttcctc
tcttaagttgccattcattcattgtcagggcattttatcacaacaagaag
gataatacaggggtaaaggatggggcagcttaaagtaatttcttggaagc
aaaacaactgctgacgtaagcagacagtctgaggtttgagtcagtggggt
tttgattcctagaactttccgcaaaattgggaatgccgttattagtatgt
cagcctaggaggttttccatcttctttatttctttcctaaaggatcctgc
ttctgtctttatcaacgaagtgcccagatgaaaatatctcccacactccc
tttgcagatggggtagcaggatcagctgtgttttgaacagagagtgtaaa
tgtgggtgccactgggtaaagttctgaagcttgtaaagtaggaggggagg
actaagctgagagctgcctttgtcttcgactttcctgctggagtgggtcc
taggatgggcagtttatctgcagttagtgaagatggtagacttgacttac
aggctggcccttccttaataaggctttgggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_118170209_118171250
seq2: B6Ng01-045P23.b_45_1075 (reverse)

seq1  ACCCAAAGACATTATTAAGGAAGGGCCAAGACTTGTAATGTCATAGTCTA  50
      |||||||| | |||||||||||||||||   | ||||| |||| ||||||
seq2  ACCCAAAG-CCTTATTAAGGAAGGGCCA--GCCTGTAA-GTCA-AGTCTA  45

seq1  CCCATCCTTCACATAACTGCAAGATAAACTGCCCATCCTTAGGACCCAAC  100
       |||| |||||| ||||||| ||||||||||||||||| |||||||||  
seq2  -CCAT-CTTCAC-TAACTGC-AGATAAACTGCCCATCC-TAGGACCCA--  88

seq1  TTCCAGGCAGGAAAGTCGAAGACAAAAGGCAGCTCTCAGCTTAGTCCTCC  150
       |||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTCCA-GCAGGAAAGTCGAAGAC-AAAGGCAGCTCTCAGCTTAGTCCTCC  136

seq1  CCTCCTACTTTACAATGCTTCAGAACTTTACCCAGTGGCACCCACATTTA  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCCTACTTTACAA-GCTTCAGAACTTTACCCAGTGGCACCCACATTTA  185

seq1  CACTCTCTGTTCAAAACACAGCTGATCCTGCTACCCCATCTGCAAA-GGA  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACTCTCTGTTCAAAACACAGCTGATCCTGCTACCCCATCTGCAAAGGGA  235

seq1  GTGTGGGAGATATTTTCATCTGGGCACTTCGTTGATAAAGACAGAAGCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGAGATATTTTCATCTGGGCACTTCGTTGATAAAGACAGAAGCAG  285

seq1  GATCCTTTAGGAAAGAAAT-AAGAAGATGG-AAACCTCCTAGGCTGACAT  347
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  GATCCTTTAGGAAAGAAATAAAGAAGATGGAAAACCTCCTAGGCTGACAT  335

seq1  ACTAATAACGGCATTCCCAATTTTGCGG-AAGTTCTAGGAATCAAAACCC  396
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTAATAACGGCATTCCCAATTTTGCGGAAAGTTCTAGGAATCAAAACCC  385

seq1  CACTGACTCAAACCTCAGACTGTCTGCTTACGTCAGCAGTTGTTTTGCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACTCAAACCTCAGACTGTCTGCTTACGTCAGCAGTTGTTTTGCTT  435

seq1  CCAAGAAATTACTTTAAGCTGCCCCATCCTTTACCCCTGTATTATCCTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAATTACTTTAAGCTGCCCCATCCTTTACCCCTGTATTATCCTTC  485

seq1  TTGTTGTGATAAAATGCCCTGACAATGAATGAATGGCAACTTAAGAGAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGATAAAATGCCCTGACAATGAATGAATGGCAACTTAAGAGAGG  535

seq1  AAGCGTTTGTTTGGGCTCAGAGTTCAAGGGTAGAATCTAACATGGCAAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTTTGTTTGGGCTCAGAGTTCAAGGGTAGAATCTAACATGGCAAGG  585

seq1  AAATTGCTGTGGGTCACATTGCAATCACAGTCGGGAGGGAAAAAGCAATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTGTGGGTCACATTGCAATCACAGTCGGGAGGGAAAAAGCAATA  635

seq1  AATAATGCCTTGCTTAACTGCTTCTGCTTTTAAAAAAGTCCAGAACCCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCCTTGCTTAACTGCTTCTGCTTTTAAAAAAGTCCAGAACCCAA  685

seq1  ACTCATGGGTTGCTGTCACTCAATTACCCTAGTCTGCATAATCCCTCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGGGTTGCTGTCACTCAATTACCCTAGTCTGCATAATCCCTCATG  735

seq1  GGCATGCTCAGAGACAGTCTAGAGAATCCAGATCAACAACAGTAACTATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTCAGAGACAGTCTAGAGAATCCAGATCAACAACAGTAACTATC  785

seq1  ACAACTATCAAACCTATTCTTTACCAGTGACTCAGACTACCCCTCTCCCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTATCAAACCTATTCTTTACCAGTGACTCAGACTACCCCTCTCCCC  835

seq1  CTAACTGGATTGACCAGACAGTCTGAAATCAGAGGTTCTGCAACTCGCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGGATTGACCAGACAGTCTGAAATCAGAGGTTCTGCAACTCGCTG  885

seq1  GTGGCTTCCTTTGGGAAAACAAAGTACTACCCCTTTTCTGCAAATTCCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCCTTTGGGAAAACAAAGTACTACCCCTTTTCTGCAAATTCCAC  935

seq1  AGTACGAACGAATGCTGTCGGTGCTCTTTTCCAAAGCCAAAATGGTTTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGAACGAATGCTGTCGGTGCTCTTTTCCAAAGCCAAAATGGTTTCC  985

seq1  AAAGCTTATCTGCTTAAGAAAGGATTAAAAAACAGAATAGGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTATCTGCTTAAGAAAGGATTAAAAAACAGAATAGGAATTC  1031