BAC Information

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BAC

Clone NameB6Ng01-047I14
Chromosome2 (Build37)
Map Location 149,679,580 - 149,824,341
singlet/doubletdoublet
Overlap geneOTTMUSG00000015750
Upstream geneCst3, OTTMUSG00000015744, Gm1330, EG668921, LOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik
Downstream geneLOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047I14.bB6Ng01-047I14.g
ACCDH872370DH872371
length758361
definitionDH872370|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I14, 5' end.DH872371|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,823,584 - 149,824,341)(149,679,580 - 149,679,946)
sequence
gaattcttgtgtctgggtatttcttttcctaccctttggcaaatatgttg
tgaaaaatgtctgtcataaaacagggagtgcagccagttcattagtctgg
agtttcagtggcttgctgtgtgtgcacctttgcatctgcaggagtagggc
acaaggaaagtctttagtgtggtcagcagctctagctttatactcttgag
cactgcacatgtggatttcagcccacagataaagaagccaggctgggatg
atagcttagtttgtaaagatcctgctgtgttaacatgcggacctgagttc
aacccctactttactgtgccagtgtgtgcctgaaaactcagtgctgagag
acagaaaccaaaggatccctggggcttggtgactaaccatctagacaaat
tacaagctctagtttcagggagatattgtctcaaaaaggaaatggaaagt
gcttgtgggagactgtggatactgatttctgtttctacaagtttctgtcc
aaatatatgcaatacacatcaacatgtgtgtccattacatgcacacatgc
atgtgtgtgcacatgcacatgcacgcacacacacacacacacacacacac
acacagagagcgagagagagagagagagagagagagagagagagagagag
agagagagagagacatgggggtacagtgtgaaataataagcaaaccataa
tgcaggcacagctgcaagctcagtgttttagacacagctggagggggagg
gggagggg
cacattgattcccataaaacccacaaacctaagggttaagagcaggtgtc
acaaacctagctgactgctctgcagatgaatctctcatcccagccaggta
catgcacattgaaacaagtattctgaaaagcatacataggtgggaacctt
tcccagagggttaggcttctcatttgaccaataaatgggtgatttgatgt
gccgtttttttttttcctctagtgcatggtattcaaaattatgactaata
aaagggctcaatgggatggtggggttttcttggtatttttttttaggatg
tgatctctctctttctctctcctatctgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149823584_149824341
seq2: B6Ng01-047I14.b_47_804 (reverse)

seq1  CCCCTCCCCCTCCCCCTCCAGCTGTGTCTAAAACACTGAGCTTGCAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCTCCCCCTCCAGCTGTGTCTAAAACACTGAGCTTGCAGCTG  50

seq1  TGCCTGCATTATGGTTTGCTTATTATTTCACACTGTACCCCCATGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCATTATGGTTTGCTTATTATTTCACACTGTACCCCCATGTCTCT  100

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCT  150

seq1  CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCATGTGCATGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCATGTGCATGTGC  200

seq1  ACACACATGCATGTGTGCATGTAATGGACACACATGTTGATGTGTATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGCATGTGTGCATGTAATGGACACACATGTTGATGTGTATTGC  250

seq1  ATATATTTGGACAGAAACTTGTAGAAACAGAAATCAGTATCCACAGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTGGACAGAAACTTGTAGAAACAGAAATCAGTATCCACAGTCTC  300

seq1  CCACAAGCACTTTCCATTTCCTTTTTGAGACAATATCTCCCTGAAACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGCACTTTCCATTTCCTTTTTGAGACAATATCTCCCTGAAACTAG  350

seq1  AGCTTGTAATTTGTCTAGATGGTTAGTCACCAAGCCCCAGGGATCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTAATTTGTCTAGATGGTTAGTCACCAAGCCCCAGGGATCCTTTG  400

seq1  GTTTCTGTCTCTCAGCACTGAGTTTTCAGGCACACACTGGCACAGTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTCTCTCAGCACTGAGTTTTCAGGCACACACTGGCACAGTAAAG  450

seq1  TAGGGGTTGAACTCAGGTCCGCATGTTAACACAGCAGGATCTTTACAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTTGAACTCAGGTCCGCATGTTAACACAGCAGGATCTTTACAAAC  500

seq1  TAAGCTATCATCCCAGCCTGGCTTCTTTATCTGTGGGCTGAAATCCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTATCATCCCAGCCTGGCTTCTTTATCTGTGGGCTGAAATCCACAT  550

seq1  GTGCAGTGCTCAAGAGTATAAAGCTAGAGCTGCTGACCACACTAAAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGCTCAAGAGTATAAAGCTAGAGCTGCTGACCACACTAAAGACT  600

seq1  TTCCTTGTGCCCTACTCCTGCAGATGCAAAGGTGCACACACAGCAAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTGCCCTACTCCTGCAGATGCAAAGGTGCACACACAGCAAGCCA  650

seq1  CTGAAACTCCAGACTAATGAACTGGCTGCACTCCCTGTTTTATGACAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTCCAGACTAATGAACTGGCTGCACTCCCTGTTTTATGACAGAC  700

seq1  ATTTTTCACAACATATTTGCCAAAGGGTAGGAAAAGAAATACCCAGACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCACAACATATTTGCCAAAGGGTAGGAAAAGAAATACCCAGACAC  750

seq1  AAGAATTC  758
      ||||||||
seq2  AAGAATTC  758

seq1: chr2_149679580_149679946
seq2: B6Ng01-047I14.g_69_435

seq1  GAATTCCACATTGATTCCCATAAAACCCACAAACCTAAGGGTTAAGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATTGATTCCCATAAAACCCACAAACCTAAGGGTTAAGAGCA  50

seq1  GGTGTCACAAACCTAGCTGACTGCTCTGCAGATGAATCTCTCATCCCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCACAAACCTAGCTGACTGCTCTGCAGATGAATCTCTCATCCCAGC  100

seq1  CAGGTACATGCACATTGAAACAAGTATTCTGAAAAGCATACATAGGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACATGCACATTGAAACAAGTATTCTGAAAAGCATACATAGGTGGG  150

seq1  AACCTTTCCCAGAGGGTTAGGCTTCTCATTTGACCAATAAATGGGTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTCCCAGAGGGTTAGGCTTCTCATTTGACCAATAAATGGGTGATT  200

seq1  TGATGTGCCGTTTTTTTTTTTCCTCTAGTGCATGGTATTCAAAATTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGCCGTTTTTTTTTTTCCTCTAGTGCATGGTATTCAAAATTATGA  250

seq1  CTAATAAAAGGGCTCAATGGGATGGTGGGGTTTTCTTGGTATTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAGGGCTCAATGGGATGGTGGGGTTTTCTTGGTATTTTTTTTT  300

seq1  AGGATGTGATCTCTCTCTTTCTCTCTCCTATCTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGATCTCTCTCTTTCTCTCTCCTATCTGTGTGTGTGTGTGTGTG  350

seq1  TGTGTGTGTGTGTGTGT  367
      |||||||||||||||||
seq2  TGTGTGTGTGTGTGTGT  367