BAC Information

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BAC

Clone NameB6Ng01-047I17
Chromosome2 (Build37)
Map Location 42,767,391 - 42,768,486
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC625094
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047I17.bB6Ng01-047I17.g
ACCDH872376DH872377
length1,2321,078
definitionDH872376|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I17, 5' end.DH872377|Mus musculus domesticus DNA, BAC clone: B6Ng01-047I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaataaacgaaattcaaatgtctgagaaacatgtaaaacaatg
tgaaacttctttatttatcacaggaatacaaatcaaaactactttgagat
ttcaccttatgcctgtaagaatgactaagatcagtaagacaagtcaaagg
tcataatggtgagcatgtcaaatcataaaactcctgcattgctggtggga
gtgaaaacttgtacagtcattatgaaagcactgtggccatacacctagta
gatgagaatcagtcttccttaagatctagctatactactcctgggcacat
accccaaggatgctttatcctatcacaaaacacttgttgaaacatgttcc
ttgctattttattcacgataggttgaaactggtgacaacctagatgttgc
ttaacagaagaatggacaaagaaaatgtacttttccaaaattaaggttta
ttcacctgtttaaaaaactgagaccatgaaatgctcaccctagtattttc
tagtattaaactaaaaaaatatcatcctgagtgaggtaatccacacccag
ctaataaagaaaaaagatacctacactgggaattataatgttcctgatct
cagatgcctagaaaaagcataaatacacaatcagtagcagtcagaacaat
gtatcaccagtagaacccagcaatcctaaaatagcaggccctgaatattc
caatacatttcaagcacaagtaaaagaccttggtacataataatcaagac
acttaatacatagaaaaaaaggagaagagcaaaagttcaagggaaaaata
tagaaagacagaactgttagtattacaactgacttttcatggagagtcta
aaagccataagagccctgcactaatgtgccacagactttaagaaatcaca
gatgccattccagattagtataaccagcaatgtttcaatcaccataaatg
agaaatagacattccatgataaataaagtttaagtgatccagtcttacag
ttctagaggaaactcacagaagttactacgataaagattcaggaacaatt
attcgacacaagtcaaggagaaagcttcctcttactcagaacagggcacc
atttaccacactactcatcactagtatcgtctgctctactcgttccgtac
accaattactggaccaaagctggacgaatctccagctaatggtcgatctc
ctacaagacaccgccttacaaaaggtgttgta
gaattccagatttcagtattttaactgaaggctcaatcacatttgtatca
aagcttatccaatggggtgccaattagctccacattcaaaattaacatgt
taggccattaacaaagtgagtggctgcaaacaattaaatgaatgactttc
tgtgagttaggtggcagacttcataagctttccttcctggagagtaaaga
gtagaggagtcacagcttagcaaatctttctgcaaaggaatgcttatctg
tcagtgctttcaaagcctatcagattctttatggatcttcatatacatac
agctctccatatccacagtttccatgtgctagttcagctgtggattaacc
atatctgaaagaaattgaccatctttaccaatttcctagtaggtgcagtt
ttgttttgttttgttttgttgtttttcaaatctgcttatgtgcacactaa
acagcattataagtgcttacatagcttttactttgccttaagactctcaa
actatagctctctccttccaccataagtaacccaggaaacaaactcaagt
cattaggattggcagcaaacaccttacctgccagtgatattatggtttct
aaggatgcccatatcttacactggcatcaaaagattgaggatccagaaaa
tatgggagatactgttttacactctgcttcaccaatgtctcagaatgatg
tctttagttttatccaaagacaggttaaaatagaggacagagtctctttc
tacaatgttctctataggggaaacaaatcttatgagaatgaattgataaa
tattaatgcgtctcactggactttccctacgatttaagtaaaaggttgaa
aattgttgatgtagtttatgacatttctgttaagtgctaataaagttgta
gtgaatgtccatatggaaaaaaagatctcaaactaggaataattaaatac
atagagtttacttctagatttcattctcagatgagtggataagaactggt
atattttatacatggagaattacttagctattaaataaatatgaagcttc
aggtaatagatgtcactagaaaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42767391_42768486
seq2: B6Ng01-047I17.g_65_1142

seq1  GAATTCCAGATTTCAGTATTTTAACTGAAGGCTCAATCACATTTGTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTTCAGTATTTTAACTGAAGGCTCAATCACATTTGTATCA  50

seq1  AAGCTTATCCAATGGGGTGCCAATTAGCTCCACATTCAAAATTAACATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTATCCAATGGGGTGCCAATTAGCTCCACATTCAAAATTAACATGT  100

seq1  TAGGCCATTAACAAAGTGAGTGGCTGCAAACAATTAAATGAATGACTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATTAACAAAGTGAGTGGCTGCAAACAATTAAATGAATGACTTTC  150

seq1  TGTGAGTTAGGTGGCAGACTTCATAAGCTTTCCTTCCTGGAGAGTAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTTAGGTGGCAGACTTCATAAGCTTTCCTTCCTGGAGAGTAAAGA  200

seq1  GTAGAGGAGTCACAGCTTAGCAAATCTTTCTGCAAAGGAATGCTTATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGAGTCACAGCTTAGCAAATCTTTCTGCAAAGGAATGCTTATCTG  250

seq1  TCAGTGCTTTCAAAGCCTATCAGATTCTTTATGGATCTTCATATACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTTTCAAAGCCTATCAGATTCTTTATGGATCTTCATATACATAC  300

seq1  AGCTCTCCATATCCACAGTTTCCATGTGCTAGTTCAGCTGTGGATTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCCATATCCACAGTTTCCATGTGCTAGTTCAGCTGTGGATTAACC  350

seq1  ATATCTGAAAGAAATTGACCATCTTTACCAATTTCCTAGTAGGTGCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGAAAGAAATTGACCATCTTTACCAATTTCCTAGTAGGTGCAGTT  400

seq1  TTGTTTTGTTTTGTTTTGTTGTTTTTCAAATCTGCTTATGTGCACACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTGTTGTTTTTCAAATCTGCTTATGTGCACACTAA  450

seq1  ACAGCATTATAAGTGCTTACATAGCTTTTACTTTGCCTTAAGACTCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTATAAGTGCTTACATAGCTTTTACTTTGCCTTAAGACTCTCAA  500

seq1  ACTATAGCTCTCTCCTTCCACCATAAGTAACCCAGGAAACAAACTCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGCTCTCTCCTTCCACCATAAGTAACCCAGGAAACAAACTCAAGT  550

seq1  CATTAGGATTGGCAGCAAACACCTTACCTGCCAGTGATATTATGGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGATTGGCAGCAAACACCTTACCTGCCAGTGATATTATGGTTTCT  600

seq1  AAGGATGCCCATATCTTACACTGGCATCAAAAGATTGAGGATCCAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGCCCATATCTTACACTGGCATCAAAAGATTGAGGATCCAGAAAA  650

seq1  TATGGGAGATACTGTTTTACACTCTGCTTCACCAATGTCTCAGAATGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAGATACTGTTTTACACTCTGCTTCACCAATGTCTCAGAATGATG  700

seq1  TCTTTAGTTTTATCCAAAGACAGGTTAAAATAGAGGACAGAGTCTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTTTTATCCAAAGACAGGTTAAAATAGAGGACAGAGTCTCTTTC  750

seq1  TACAATGTTCTCTATAGGGGAAACAAAATCTTATGAGAATGAATTGATAA  800
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  TACAATGTTCTCTATAGGGGAAAC-AAATCTTATGAGAATGAATTGAT-A  798

seq1  AATATTAATGCGTCTCACTGGACTTTCCCTACGATTTAAGTAAAAGGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAATGCGTCTCACTGGACTTTCCCTACGATTTAAGTAAAAGGTTG  848

seq1  AAAATTGTTGATGTAGTTTATGAACATTTCTGTTAAGTGCTAATAAAGTT  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAATTGTTGATGTAGTTTATG-ACATTTCTGTTAAGTGCTAATAAAGTT  897

seq1  GTAGTGAATGTTCCATAATGGAAAAAAAAGAATCTCAAACTAGGAATAAA  950
      |||||||||| ||||| |||||||||||   |||||||||||||||||| 
seq2  GTAGTGAATG-TCCAT-ATGGAAAAAAA--GATCTCAAACTAGGAATAA-  942

seq1  TTAAAATACATAGGAGTTTAACTTCTAGATTTCATTCCTCAGATGAGTGG  1000
       | ||||||||| |||||| |||||||||||||||| |||||||||||||
seq2  -TTAAATACATA-GAGTTT-ACTTCTAGATTTCATT-CTCAGATGAGTGG  988

seq1  ATAAAGAAACTGGTATA-TTTATACAT-GAGATATTACTTAGCTATTAAA  1048
      ||||   |||||||||| ||||||||| |||| |||||||||||||| ||
seq2  ATAA--GAACTGGTATATTTTATACATGGAGA-ATTACTTAGCTATT-AA  1034

seq1  ATAAAATAATGAAAGCTTCAGGTAAATAGATGTCACTAGAAAAAAAAA  1096
      |||||   ||| ||||||||||| ||||||||||||||||||||||||
seq2  ATAAA--TATG-AAGCTTCAGGT-AATAGATGTCACTAGAAAAAAAAA  1078