BAC Information

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BAC

Clone NameB6Ng01-048H01
Chromosome2 (Build37)
Map Location 142,776,686 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048H01.bB6Ng01-048H01.g
ACCDH872999DH873000
length8871,072
definitionDH872999|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H01, 5' end.DH873000|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatcttttaggagggttatttgatt
ttctgggttccaccctctttagttctttatatatattggatattagttcc
ctatctgatttaagataggcaaagattctttcccactctgttggtggcct
ttttgtcttattgacagtgtattttgccttgcagaagctttgtagtttca
tgaggtcccatttgtcaatcctcaatcttacagcacaagccattatggtt
ctattcaggaattttacccctgtgccaatatcttcagggtttcccccact
ttctccactataaatttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggctcgattcgca
ttcttctgatgataacaaccagatgtgccagcaccatttgttgaaaatgc
cgtctttcttccactggatggttttagctcccttgtcaaagatcaagtga
ccataagtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtcactataccagtatcatgcagtttttatcacaattgctc
tgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttta
tccttgagaagagcttttgccatcctaggttttttgttattcctgatgaa
tttgcagattgctctttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattctt
acaacgttgatcctgccaatccatgagcatgggaggtctttccatcttct
gagatcttctttatttctttcttcagagacttgagtt
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcatatgtttctctgcatctaacaagatgatcaaatgttttttgtctttg
agtttgtttatatggtggattacattgatggatttccgtgtatcaaatca
tccctgcatccctggaaagaaacatacttggtcaagatggatgattgttt
tggtatgttcttggatttggttagcgagaattttattgagtatttttgca
ttgatattcataagggaaattggtctgaagttcactatctttgttggatc
tttctgtgttttaggtattagactaattgtggcttcatagaatgaattag
gtagagtaccttctgcttctattttgtggaatagtttgtgcagaactgga
attagatcttctttgaaggtctggtagaactctacaataaactcttctgt
tcctgtgctatttttggttgagagactattaattactccttctattactt
ttagggaatataggactgttttagatcattaatctgatcctgatttaaat
tttgggtacctggtatttgtccaaaaatttgtcccatttcagccaggatt
ttccagtttgggtttaatatagccttttgtaaaaggatctggatggtggt
ttggatttcttcaggatctgttgttatgtctcccttttcatttctgatct
ttttaattaggatgctgtcccctgtgccccctagtgagtctagctaaagt
tttatctacttgttgattttctcagagaaccagatccctcatttggtttg
attcttcgaatagttcttcctggttccacttgggtgaattcgcccctaga
ccttaatattttcttggcactctctctcctgtgggtggatttatcttcct
tctgttctagaagctttaagtgtgttgtcagatgctatgtgtgctctctc
tagctcttctttgaagcatcgaagctacgagtttcctcatagaaatgttt
catttgatcctataggttggaatgtgtgggaatctatttcattaatctca
gaagttatatttctttgcttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776686_142777698
seq2: B6Ng01-048H01.b_41_591 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACTTATG  50

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGAC  100
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  GTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGAC  100

seq1  AGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150
       ||||||||||||| ||||||||||||| ||||||||||||||  |||||
seq2  GGCATTTTCAACAAATGGTGCTGGCACATCTGGTTGTTATCAT-CAGAAG  149

seq1  AATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGT  200
      |||| ||||||| |||| | ||||||||||||||||||||||||||||||
seq2  AATGCGAATCGAGCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  199

seq1  GGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GGATCAAGGAACTTCACATAAAACCAGAGACACTGAAATTTATAGTGGAG  249

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAA  300
      ||||||||| ||| || ||||||||| ||||||||||  |||||||||||
seq2  AAAGTGGGGGAAA-CCCTGAAGATATTGGCACAGGGGTAAAATTCCTGAA  298

seq1  CAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACC  350
       |||||   |||||||||||||||||||| ||| ||||||||||||||||
seq2  TAGAACCATAATGGCTTGTGCTGTAAGATTGAGGATTGACAAATGGGACC  348

seq1  TAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  400
      | |||||||| ||||| ||||||||||||||| |||| ||||||||||||
seq2  TCATGAAACTACAAAGCTTCTGCAAGGCAAAATACACTGTCAATAAGACA  398

seq1  AAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  450
      ||||| ||||||||||| |||||||| |||||| |||||| |||||||||
seq2  AAAAGGCCACCAACAGAGTGGGAAAGAATCTTTGCCTATCTTAAATCAGA  448

seq1  TAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCA  500
      ||||| |||||||||||| |||||||||||||| |||| ||||||   ||
seq2  TAGGGAACTAATATCCAATATATATAAAGAACTAAAGAGGGTGGAACCCA  498

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTG  550
      ||||||||||||||||   ||||| ||||||||||           ||  
seq2  GAAAATCAAATAACCCTCCTAAAAGATGGGGCTCA----------GAGCT  538

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  600
      ||| |||||   |                                     
seq2  GAACAAAGAATTC-------------------------------------  551

seq1  CATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  650
                                                        
seq2  --------------------------------------------------  551

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  700
                                                        
seq2  --------------------------------------------------  551

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  750
                                                        
seq2  --------------------------------------------------  551

seq1  AATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  800
                                                        
seq2  --------------------------------------------------  551

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGT  850
                                                        
seq2  --------------------------------------------------  551

seq1  CTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATC  900
                                                        
seq2  --------------------------------------------------  551

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  950
                                                        
seq2  --------------------------------------------------  551

seq1  GTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACT  1000
                                                        
seq2  --------------------------------------------------  551

seq1  GAACAAAGAATTC  1013
                   
seq2  -------------  551