BAC Information

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BAC

Clone NameB6Ng01-048I09
Chromosome2 (Build37)
Map Location 40,657,316 - 40,751,363
singlet/doubletdoublet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048I09.bB6Ng01-048I09.g
ACCDH873055DH873056
length965422
definitionDH873055|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I09, 5' end.DH873056|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,750,791 - 40,751,363)(40,657,316 - 40,657,743)
sequence
gaattctatattctccagattctataacatatttcaattttaaaaacaat
cataatttaaaagtgattttacttacagactattttttatcttgtacaaa
tttaagatatactattatcattaattaaatgtttatttgtggatttcaag
aaacataaaatgtggggagccatcttggttccaggactctaccaaaagta
gtctgcacagctcagagtgtgcactgcagaggctagcggcttctgggaca
ggcgggagccacagagcttctggggcagcacccttttcaggctccagatc
tccggccaccttcctggccagaggacatgtgtctgcccggcccgggagat
ttttgcctcaggatcgaaagaagccatcgtggttccgggactccaccgaa
agtagtctgcacaggtgagagtgtggactacagaagctaacagcttctgt
gacaggccaaagcaacacagcttctgggaaaggtcctgttttgggccttc
atcttcggccaggagggaggtccgaatgccagatatctgtgcaccttccc
tgtaagaggagagcttgcctgcagagagtgctctgaccactgaaacttag
aggagagagctagtctcccaggtctgctgatagggggtaacagaatcgcc
agaggaacaatctctaaacatagacaactataacaactaactccagagat
aaccagatggtgaaaggtaaacgtaagaatcttaaaaacagaagccaaga
ccactaaccatcatcagaacccagcactcccacttcgcccagtctagggc
accccaacacatctgaaaagctagacccggattaaaagcatatctcatga
tgatggtagaggacagcaagaggactttaataactcacttaaagaataca
ggagaacactgctaaacaggtagaagacattaaagaggagcacaaaatcc
cttaagattgcagga
agtctctcaagatcacttttctaatatattttagagctcatctttattta
gcttattagtgactgaactcagaagacattaaatgaaggaggaactaaat
ggctgataaaatttaacaaaagtcttcaggaattgtgtggagtttaggtg
ggagtggaaaagtcttgattcagactgtaaactacatctctgtctggatg
cgtttctagagccactgcgggaggggccagctgtcctaactctattcaga
acacagcatcttaatcaaattgctgggtgagtgcacattactttctcata
aatgttttagaggacaaaataaaacttcagcaggacagatgtagtcactg
aagctttgttgaaaacctgaaatttggcaggtgctctattctataggtcc
agtgtgtgtgtgtatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40750791_40751363
seq2: B6Ng01-048I09.b_45_617 (reverse)

seq1  TGCAGGCAAGCTCTCCTCTTACAGGGAAGGTGCACAGATATCTGGCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCAAGCTCTCCTCTTACAGGGAAGGTGCACAGATATCTGGCATTC  50

seq1  GGACCTCCCTCCTGGCCGAAGATGAAGGCCCAAAACAGGACCTTTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCCCTCCTGGCCGAAGATGAAGGCCCAAAACAGGACCTTTCCCAG  100

seq1  AAGCTGTGTTGCTTTGGCCTGTCACAGAAGCTGTTAGCTTCTGTAGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGTTGCTTTGGCCTGTCACAGAAGCTGTTAGCTTCTGTAGTCCA  150

seq1  CACTCTCACCTGTGCAGACTACTTTCGGTGGAGTCCCGGAACCACGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCACCTGTGCAGACTACTTTCGGTGGAGTCCCGGAACCACGATGG  200

seq1  CTTCTTTCGATCCTGAGGCAAAAATCTCCCGGGCCGGGCAGACACATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCGATCCTGAGGCAAAAATCTCCCGGGCCGGGCAGACACATGTC  250

seq1  CTCTGGCCAGGAAGGTGGCCGGAGATCTGGAGCCTGAAAAGGGTGCTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCCAGGAAGGTGGCCGGAGATCTGGAGCCTGAAAAGGGTGCTGCC  300

seq1  CCAGAAGCTCTGTGGCTCCCGCCTGTCCCAGAAGCCGCTAGCCTCTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGCTCTGTGGCTCCCGCCTGTCCCAGAAGCCGCTAGCCTCTGCAG  350

seq1  TGCACACTCTGAGCTGTGCAGACTACTTTTGGTAGAGTCCTGGAACCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTCTGAGCTGTGCAGACTACTTTTGGTAGAGTCCTGGAACCAAG  400

seq1  ATGGCTCCCCACATTTTATGTTTCTTGAAATCCACAAATAAACATTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCCCACATTTTATGTTTCTTGAAATCCACAAATAAACATTTAAT  450

seq1  TAATGATAATAGTATATCTTAAATTTGTACAAGATAAAAAATAGTCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATAATAGTATATCTTAAATTTGTACAAGATAAAAAATAGTCTGTA  500

seq1  AGTAAAATCACTTTTAAATTATGATTGTTTTTAAAATTGAAATATGTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATCACTTTTAAATTATGATTGTTTTTAAAATTGAAATATGTTAT  550

seq1  AGAATCTGGAGAATATAGAATTC  573
      |||||||||||||||||||||||
seq2  AGAATCTGGAGAATATAGAATTC  573

seq1: chr2_40657316_40657743
seq2: B6Ng01-048I09.g_64_491

seq1  GAATTCAGTCTCTCAAGATCACTTTTCTAATATATTTTAGAGCTCATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCTCAAGATCACTTTTCTAATATATTTTAGAGCTCATCTT  50

seq1  TATTTAGCTTATTAGTGACTGAACTCAGAAGACATTAAATGAAGGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCTTATTAGTGACTGAACTCAGAAGACATTAAATGAAGGAGGAA  100

seq1  CTAAATGGCTGATAAAATTTAACAAAAGTCTTCAGGAATTGTGTGGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGGCTGATAAAATTTAACAAAAGTCTTCAGGAATTGTGTGGAGTT  150

seq1  TAGGTGGGAGTGGAAAAGTCTTGATTCAGACTGTAAACTACATCTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGGAGTGGAAAAGTCTTGATTCAGACTGTAAACTACATCTCTGTC  200

seq1  TGGATGCGTTTCTAGAGCCACTGCGGGAGGGGCCAGCTGTCCTAACTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCGTTTCTAGAGCCACTGCGGGAGGGGCCAGCTGTCCTAACTCTA  250

seq1  TTCAGAACACAGCATCTTAATCAAATTGCTGGGTGAGTGCACATTACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACACAGCATCTTAATCAAATTGCTGGGTGAGTGCACATTACTTT  300

seq1  CTCATAAATGTTTTAGAGGACAAAATAAAACTTCAGCAGGACAGATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATGTTTTAGAGGACAAAATAAAACTTCAGCAGGACAGATGTAG  350

seq1  TCACTGAAGCTTTGTTGAAAACCTGAAATTTGGCAGGTGCTCTATTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAAGCTTTGTTGAAAACCTGAAATTTGGCAGGTGCTCTATTCTAT  400

seq1  AGGTCCAGTGTGTGTGTGTATGTGTGTG  428
      ||||||||||||||||||||||||||||
seq2  AGGTCCAGTGTGTGTGTGTATGTGTGTG  428