BAC Information

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BAC

Clone NameB6Ng01-048O11
Chromosome2 (Build37)
Map Location 134,624,200 - 134,771,393
singlet/doubletdoublet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048O11.bB6Ng01-048O11.g
ACCDH873324DH873325
length1,1421,155
definitionDH873324|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O11, 5' end.DH873325|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,624,200 - 134,625,351)(134,770,206 - 134,771,393)
sequence
gaattctcctttttcaccccagtgtacattatcagcatattttctccacc
acttcctaatataaatctcgggcaaccctgtggaccatcacagtctcctt
tttcctgtgttgatattaaagtattggtttatttagaagtgcttgtgtct
agtcacatgtgttctcttggagtagcatgaaattatgaaagtcaccatga
agtcagaattgtagtcagccttgaccaacacaccttacacatgtgctaag
gaaggagttgtggaatctgaggactggtgcttgaggctactcaggaggct
aacggtaactttcatatcaattgatatgggctttcagtacaaagtagcac
agattttcaatagaaactctcctcttggttcttgagactaaaaatgtata
gttttagaaagcttattttcttctcagagccagagggaaaagtttgttcc
aggcctcttttcttggcatgggtagctgttttcctctctgtctctttcag
gttgtgtctgtgccccaggttcttcttcttctaaggatacttggattagc
acccaccctgaagacttcttgacttaaccatatctttaaagaaactatct
cccaataagggcatgcttagagttcttcagcatcttgcaggggagaaaac
acagatcagcctgtagcctacctgagtcaggtaaagagtagcttgccaac
acggaaaatctccagatgagattgacagaaaagaaaactgagtttccttg
ctgttgccatcagtgtttgtagtttcactgtcccatagaaatatattagg
atcacatgagattttttatgtgtgtatgaatatatacgtatgtgcatgac
agatacaggtagatccatgggcacactagcagtccagcttgatctacttg
gtgagttcaaggccagagacgtgtctctcatatagtagggattgcctgag
gagtataaccctaggtgtattgccttctgacttctagcctcactattggg
gaactcaaaagtatactctgcccagcagaatatcacctctgttgggcttt
attaaaatgttgaattccgacactatctaaccatagacaaaaagttgcct
cctttatcttaactccatggatgggtcgtgcaatccatttta
gaattctacacaacctcttcttcagcaaaggaaacctccacaaggtcatg
cccattcagcagggcttcctcactgagagggcaagctgtatactaagcaa
tgctgtatactgagcagctaatactgctgctgccgtgcaacctaagcaat
ggagcttgggcaggaagtgagctctagcacttagtgaaagcccactggac
ctcagcatcaggacagcatgtgtattctgtggcgaagagttgcagctctc
tgagcactcacaggcaacattccataaaaccacatctctttttgagagat
ggaaggatataggctctcgaactagaccatcttattaagttaaatttccc
ctttattagttaaagccatgagtcttgattcatgttaataacctctccac
acttcatctttccacctaaaatataaaatcttcaccttttgttttctata
ataatcaattgagttaatgcactagtgtttactgaaaataaggccttggg
catgagaagaaattaaagagataatattggtttatagtcactgattacct
tcatttaaagacagtatggtttctgtcttccctgaccccaatagaagatg
tagaattagatctttacttttgtgagttttgccccaagagataattatac
tgtgagacctgcccgctacctacctattttctcattttcagtggcaaaat
aaggccatatttataagaagtgggctggccaaagaagtgctttcccaata
gctaagtagtgcttactttatacacatctctgctgcacagctgatctcat
tgagacacagaacacaagaccttttagaagttacttaaactatgggaagc
ttcaactcagagcatgaagcgcatagctccaatactgcacaaatggactc
agcaaacccctaaagccacacacagtcatggtcaactgatggttttcacg
agagactgagctggaatcttcagcagctgagacactgagctacttcattc
agtacaggtgagaaagaacaaagctacatgtactggtaagcttcagtttg
acaggaggacaaacactgtcactccgagactgaggcacttcttgagagag
gcttcttaacttccagtacatctgcgagaatacaagaaattgagaccttg
agaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134624200_134625351
seq2: B6Ng01-048O11.b_46_1187

seq1  GAATTCTCCTTTTTCACCCCAGTGTACATTATCAGCATATTTTCTCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTTTCACCCCAGTGTACATTATCAGCATATTTTCTCCACC  50

seq1  ACTTCCTAATATAAATCTCGGGCAACCCTGTGGACCATCACAGTCTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTAATATAAATCTCGGGCAACCCTGTGGACCATCACAGTCTCCTT  100

seq1  TTTCCTGTGTTGATATTAAAGTATTGGTTTATTTAGAAGTGCTTGTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTGTTGATATTAAAGTATTGGTTTATTTAGAAGTGCTTGTGTCT  150

seq1  AGTCACATGTGTTCTCTTGGAGTAGCATGAAATTATGAAAGTCACCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATGTGTTCTCTTGGAGTAGCATGAAATTATGAAAGTCACCATGA  200

seq1  AGTCAGAATTGTAGTCAGCCTTGACCAACACACCTTACACATGTGCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAATTGTAGTCAGCCTTGACCAACACACCTTACACATGTGCTAAG  250

seq1  GAAGGAGTTGTGGAATCTGAGGACTGGTGCTTGAGGCTACTCAGGAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTTGTGGAATCTGAGGACTGGTGCTTGAGGCTACTCAGGAGGCT  300

seq1  AACGGTAACTTTCATATCAATTGATATGGGCTTTCAGTACAAAGTAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGTAACTTTCATATCAATTGATATGGGCTTTCAGTACAAAGTAGCAC  350

seq1  AGATTTTCAATAGAAACTCTCCTCTTGGTTCTTGAGACTAAAAATGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCAATAGAAACTCTCCTCTTGGTTCTTGAGACTAAAAATGTATA  400

seq1  GTTTTAGAAAGCTTATTTTCTTCTCAGAGCCAGAGGGAAAAGTTTGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAAAGCTTATTTTCTTCTCAGAGCCAGAGGGAAAAGTTTGTTCC  450

seq1  AGGCCTCTTTTCTTGGCATGGGTAGCTGTTTTCCTCTCTGTCTCTTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCTTTTCTTGGCATGGGTAGCTGTTTTCCTCTCTGTCTCTTTCAG  500

seq1  GTTGTGTCTGTGCCCCAGGTTCTTCTTCTTCTAAGGATACTTGGATTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTCTGTGCCCCAGGTTCTTCTTCTTCTAAGGATACTTGGATTAGC  550

seq1  ACCCACCCTGAAGACTTCTTGACTTAACCATATCTTTAAAGAAACTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCTGAAGACTTCTTGACTTAACCATATCTTTAAAGAAACTATCT  600

seq1  CCCAATAAGGGCATGCTTAGAGTTCTTCAGCATCTTGCAGGGGAGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAAGGGCATGCTTAGAGTTCTTCAGCATCTTGCAGGGGAGAAAAC  650

seq1  ACAGATCAGCCTGTAGCCTACCTGAGTCAGGTAAAGAGTAGCTTGCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCAGCCTGTAGCCTACCTGAGTCAGGTAAAGAGTAGCTTGCCAAC  700

seq1  ACGGAAAATCTCCAGATGAGATTGACAGAAAAGAAAACTGAGTTTCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAAATCTCCAGATGAGATTGACAGAAAAGAAAACTGAGTTTCCTTG  750

seq1  CTGTTGCCATCAGTGTTTGTAGTTTCACTGTCCCATAGAAATATATTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCCATCAGTGTTTGTAGTTTCACTGTCCCATAGAAATATATTAGG  800

seq1  ATCACATGAGATTTTTTATGTGTGTATGAATATATACGTATGTGCATGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGAGATTTTTTATGTGTGTATGAATATATACGTATGTGCATGAC  850

seq1  AGATACAGGTAGATCCATGGGCACACTAGCAGTCCAGCTTGATCTACTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGGTAGATCCATGGGCACACTAGCAGTCCAGCTTGATCTACTTG  900

seq1  GTGAGTTCAAGGCCAGAGACGTGTCTCTCATATAGTAGGGAATGCCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGAGTTCAAGGCCAGAGACGTGTCTCTCATATAGTAGGGATTGCCTGAG  950

seq1  GAGTATAACCCTAGGTTGTTATTGCCTTCCTGACTCACAGCCTCACTATT  1000
      ||||||||||||||||   ||||||||| ||||||   ||||||||||||
seq2  GAGTATAACCCTAGGT--GTATTGCCTT-CTGACTTCTAGCCTCACTATT  997

seq1  GTGGATCTCAAAAGTATAACTCTGGCCCAGCAGAATCATCACCTCTGTTG  1050
      | ||| ||||||||||| ||||| |||||||||||| |||||||||||||
seq2  GGGGAACTCAAAAGTAT-ACTCT-GCCCAGCAGAAT-ATCACCTCTGTTG  1044

seq1  G--CTTATTAGAAGTGTGAATTCCCAGACTCTATCCTACACATAGCAAAA  1098
      |   |||||| ||   ||||||||  ||| |||| |||  |||||  |||
seq2  GGCTTTATTAAAATGTTGAATTCC--GACACTAT-CTAACCATAGACAAA  1091

seq1  AAGTTCCCTCCTTTTTTACTTAACTCCATGGAATGGGTCCTGCAATCCAT  1148
      ||||| |||||||| |  ||||||||||||| ||||||| ||||||||||
seq2  AAGTTGCCTCCTTTAT--CTTAACTCCATGG-ATGGGTCGTGCAATCCAT  1138

seq1  TTTA  1152
      ||||
seq2  TTTA  1142

seq1: chr2_134770206_134771393
seq2: B6Ng01-048O11.g_67_1221 (reverse)

seq1  TCTCTCAAGGGTCCCTTTCAAATTTTCTTTGTAATCTCTGCCAGATGTAC  50
      ||||||||||     | ||||  |||| ||||| ||||   |||||||||
seq2  TCTCTCAAGG-----TCTCAA--TTTC-TTGTATTCTC--GCAGATGTAC  40

seq1  TTGGGAAGTTGTAGGAAGCCTCTCATCAAGAGATG-CTCAGTCTTCGAGT  99
      |  ||||||  || |||||||||| ||||||  || ||||||||  ||||
seq2  T--GGAAGT--TAAGAAGCCTCTC-TCAAGAAGTGCCTCAGTCTCGGAGT  85

seq1  GGACAGTGTTTTGTCCTTCCTGTCAAACCTGAAGGCTTTACCCAGTACAT  149
       ||||||| ||||||| |||||||||| ||||| ||||   |||||||| 
seq2  -GACAGTG-TTTGTCC-TCCTGTCAAA-CTGAA-GCTT--ACCAGTACA-  127

seq1  TGTAGCTTTGGTTTCTTTCTCACCTGTTCCTGGAATTGAAGTAGCTCAGT  199
      ||||||||||  |||||||||||||| | |||  | ||||||||||||||
seq2  TGTAGCTTTG--TTCTTTCTCACCTG-TACTG--AATGAAGTAGCTCAGT  172

seq1  GTCTCAGCTGCCTGAGGATTTCCAGCTTCAGTCTCTCGTGAAAACCATCA  249
      |||||||||| |||| || ||||||| |||||||||||||||||||||||
seq2  GTCTCAGCTG-CTGAAGA-TTCCAGC-TCAGTCTCTCGTGAAAACCATCA  219

seq1  GTTGACCATGACTGTGTGTGGCTTTAGGGGGTTTGCTGAGTCCATTTGTG  299
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTGACCATGACTGTGTGTGGCTTTA-GGGGTTTGCTGAGTCCATTTGTG  268

seq1  CAGTATTTGGAGCTATGCGCTTCATGCTCTGAGTTGAAGCTTCCCATAGT  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTA-TTGGAGCTATGCGCTTCATGCTCTGAGTTGAAGCTTCCCATAGT  317

seq1  TTAAGTAACTTCTTAAAGGTCTTGTGTTCTGTGTCTCAATGAGATCAGCT  399
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAACTTCTAAAAGGTCTTGTGTTCTGTGTCTCAATGAGATCAGCT  367

seq1  GTGCAGCAGAGATGTGTATTAAAGTAAGCACTACTTAGCTATTGGGAAAG  449
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTGCAGCAGAGATGTGTA-TAAAGTAAGCACTACTTAGCTATTGGGAAAG  416

seq1  CACTTCTTTGGCCAGCCCACTTCTTATAAATATGGCCTTATTTTGCCACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTTGGCCAGCCCACTTCTTATAAATATGGCCTTATTTTGCCACT  466

seq1  GAAAATGAGAAAATAGGTAGGTAGCGGGCAGGTCTCACAGTATAATTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAGAAAATAGGTAGGTAGCGGGCAGGTCTCACAGTATAATTATC  516

seq1  TCTTGGGGCAAAACTCACAAAAGTAAAGATCTAATTCTACATCTTCTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGCAAAACTCACAAAAGTAAAGATCTAATTCTACATCTTCTATT  566

seq1  GGGGTCAGGGAAGACAGAAACCATACTGTCTTTAAATGAAGGTAATCAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGGGAAGACAGAAACCATACTGTCTTTAAATGAAGGTAATCAGT  616

seq1  GACTATAAACCAATATTATCTCTTTAATTTCTTCTCATGCCCAAGGCCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATAAACCAATATTATCTCTTTAATTTCTTCTCATGCCCAAGGCCTT  666

seq1  ATTTTCAGTAAACACTAGTGCATTAACTCAATTGATTATTATAGAAAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTAAACACTAGTGCATTAACTCAATTGATTATTATAGAAAACA  716

seq1  AAAGGTGAAGATTTTATATTTTAGGTGGAAAGATGAAGTGTGGAGAGGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGAAGATTTTATATTTTAGGTGGAAAGATGAAGTGTGGAGAGGTT  766

seq1  ATTAACATGAATCAAGACTCATGGCTTTAACTAATAAAGGGGAAATTTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATGAATCAAGACTCATGGCTTTAACTAATAAAGGGGAAATTTAA  816

seq1  CTTAATAAGATGGTCTAGTTCGAGAGCCTATATCCTTCCATCTCTCAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAAGATGGTCTAGTTCGAGAGCCTATATCCTTCCATCTCTCAAAA  866

seq1  AGAGATGTGGTTTTATGGAATGTTGCCTGTGAGTGCTCAGAGAGCTGCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTGGTTTTATGGAATGTTGCCTGTGAGTGCTCAGAGAGCTGCAA  916

seq1  CTCTTCGCCACAGAATACACATGCTGTCCTGATGCTGAGGTCCAGTGGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCGCCACAGAATACACATGCTGTCCTGATGCTGAGGTCCAGTGGGC  966

seq1  TTTCACTAAGTGCTAGAGCTCACTTCCTGCCCAAGCTCCATTGCTTAGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTAAGTGCTAGAGCTCACTTCCTGCCCAAGCTCCATTGCTTAGGT  1016

seq1  TGCACGGCAGCAGCAGTATTAGCTGCTCAGTATACAGCATTGCTTAGTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGGCAGCAGCAGTATTAGCTGCTCAGTATACAGCATTGCTTAGTAT  1066

seq1  ACAGCTTGCCCTCTCAGTGAGGAAGCCCTGCTGAATGGGCATGACCTTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGCCCTCTCAGTGAGGAAGCCCTGCTGAATGGGCATGACCTTGT  1116

seq1  GGAGGTTTCCTTTGCTGAAGAAGAGGTTGTGTAGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTTCCTTTGCTGAAGAAGAGGTTGTGTAGAATTC  1155