BAC Information

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BAC

Clone NameB6Ng01-048P01
Chromosome2 (Build37)
Map Location 142,776,571 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048P01.bB6Ng01-048P01.g
ACCDH873349DH873350
length831713
definitionDH873349|Mus musculus domesticus DNA, BAC clone: B6Ng01-048P01, 5' end.DH873350|Mus musculus domesticus DNA, BAC clone: B6Ng01-048P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttggatttgaccttagtacaaggagataggtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttacacttgatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagttgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatg

gaattcatctgagtcagactccacttaagtcttagtagctcattctgagc
atattcacctaaaagctggtgagtcctaaactaggcagtttttaagtgtg
tgtgtaaagaaattagaaagggccagcttggtggcacacacctttaatcg
cagcatttgggaggcagaggcagaggcaggtggatctctgaatttgaggc
catcctggtctacatagaaaattccagaccagccagggctactcactgaa
attctgtctaaaaccaccaaaaaaaaaaaaaaaccagcagaagaaggaga
aagagaaagagaaggaagaagaatggcgagagagaagaaggaaaggcaga
tatgttggtgcagtgttctgtagaaagttgactactctgttcaaagcatt
atactgacataaattttgctgctctgatgaccatgactcaatcaagcctc
tattgttcttatctagtgtctaatcagtgttccattgctgtgaagagaca
ccacaaccaaagcaactcttatgaaaggcaacatttatgggggctttctt
acagttttagaggttagtccattattatcatagcagggagcatggtgcag
gcaagcagatgttagagcagtggtggtgcaggcaagcagatgttagagca
gtggctgaaagctatatcctcctccataggcagacatggagtagggaggg
agagggagatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776571_142777698
seq2: B6Ng01-048P01.b_47_714 (reverse)

seq1  AAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGAC  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGAC  50

seq1  CTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTA  100

seq1  TAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGA  150
      ||| ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGTGACAGACAAGTAGACCAATGGAACAGAATTGAAGACCCAGAAATGA  150

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  200

seq1  CAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  250
       || | ||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGTGTAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTT  250

seq1  GTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTA  300
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACCTATCTCCTTGTACTA  300

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  350
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCCAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  350

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  400

seq1  GGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  450
      ||| ||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  GGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCAAGAA  450

seq1  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  500
      |||||||||||||||| |||||||| ||||| ||||||||||||||||||
seq2  TTGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGAC  500

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  550

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  600

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  650

seq1  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  700
       ||            ||| |||||    |||                   
seq2  GAA----------CTGAACAAAGA----ATTC------------------  668

seq1  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  750
                                                        
seq2  --------------------------------------------------  668

seq1  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  800
                                                        
seq2  --------------------------------------------------  668

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  850
                                                        
seq2  --------------------------------------------------  668

seq1  TGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTA  900
                                                        
seq2  --------------------------------------------------  668

seq1  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  950
                                                        
seq2  --------------------------------------------------  668

seq1  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  1000
                                                        
seq2  --------------------------------------------------  668

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  1050
                                                        
seq2  --------------------------------------------------  668

seq1  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAA  1100
                                                        
seq2  --------------------------------------------------  668

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  1128
                                  
seq2  ----------------------------  668


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