BAC Information

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BAC

Clone NameB6Ng01-049B20
Chromosome2 (Build37)
Map Location 114,581,193 - 114,702,067
singlet/doubletdoublet
Overlap geneLOC100043222
Upstream geneGrem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770, Atpbd4, LOC100043219
Downstream geneLOC100043232, LOC100043236, BC052040, Mrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049B20.bB6Ng01-049B20.g
ACCDH873470DH873471
length3931,070
definitionDH873470|Mus musculus domesticus DNA, BAC clone: B6Ng01-049B20, 5' end.DH873471|Mus musculus domesticus DNA, BAC clone: B6Ng01-049B20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,581,193 - 114,581,591)(114,700,971 - 114,702,067)
sequence
atgtctatttatctcagtgtccagaggagtgtactgatttatcatgggct
cttagtaaatatttactgagtggataaataaggaaaatagagatggttat
aagaagaaccagttagatcagaagcagtagaaataactggtaacacaaca
cagacatatgtaaaatacatacacctagagtgagaagcagattttattat
agagaagaaaattaaaagttaatgaaagtggtggaacaatcagaaattcc
atattttaaatgttcttattagtgacaggtgagaaattggtttttgtggt
ttattagaatcaggaaatgtacatgtattgtatatgtaatgtgtatgtat
gacaaatgtatatgtatcatgtgggtattgtatgtgtatgtat
gaattcttctgtaaagatgctctaccagcaatctcaaacaaatattccta
aagttcttgtcaagaatttaaatcacactgagaagctgaactgcagacaa
ggaaaaataaaagcttaagactatctcttaaacacttaaaaacttgaaaa
tgtatgatctccaccccaactcctctagcttttttcctgagatggtaaag
tagcatgccttatgttggagaactggccattatttagaagaagatgagta
tgttagaatctatgaacaccctttacttaattagacagcatggtgatgca
catctgtaaaagcagcacatgggaagtgaggcaggaggataatggtttgc
aggccaatctgatccacataactagttagtgacccagcagagctacaggt
gtccttgtttcaaacacaaaacaaaacctgaaaatcactgtgatttgtcc
tagggctaccttaagtttaaaatgtgtttttacataccagatgatatgta
agagttgaaattttctatcaacattaaatattttatactgttaataaaaa
aatttaatgtttaagaaaaagaaatacaagtgccaaaatttgtgtatgat
ataacaaaaaatttatatttttgtagcattttctaaagaaattcttttca
tgtaaattaggatttgtgcagattttattatccttttagacagttttaga
acaggtaatgttagataactgcccgagagagagagagagagagagagaga
gagagagagagacgagacgagagagacgagacagagacagagacagagag
agacgagacagagacgagagagacggagaaagacgagggggaaatgtata
tgcaatgccatgtgtctgcatgaagatgacaaagagacaccaagggtctc
atctttcactgcttatctcctgggatagggtctctgctgaactgaagcta
gctatttactaggctgctagtcatcaaaccccagcatgtactgactggct
cccaacatgggtacaatcaggaccacactgtgagtgaggaagatttggaa
gctggggcttgaaccaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114581193_114581591
seq2: B6Ng01-049B20.b_46_444

seq1  GAATTCATGTCTATTTATCTCAGTGTCCAGAGGAGTGTACTGATTTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCTATTTATCTCAGTGTCCAGAGGAGTGTACTGATTTATCA  50

seq1  TGGGCTCTTAGTAAATATTTACTGAGTGGATAAATAAGGAAAATAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCTTAGTAAATATTTACTGAGTGGATAAATAAGGAAAATAGAGAT  100

seq1  GGTTATAAGAAGAACCAGTTAGATCAGAAGCAGTAGAAATAACTGGTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAAGAAGAACCAGTTAGATCAGAAGCAGTAGAAATAACTGGTAAC  150

seq1  ACAACACAGACATATGTAAAATACATACACCTAGAGTGAGAAGCAGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACAGACATATGTAAAATACATACACCTAGAGTGAGAAGCAGATTT  200

seq1  TATTATAGAGAAGAAAATTAAAAGTTAATGAAAGTGGTGGAACAATCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAGAGAAGAAAATTAAAAGTTAATGAAAGTGGTGGAACAATCAGA  250

seq1  AATTCCATATTTTAAATGTTCTTATTAGTGACAGGTGAGAAATTGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATATTTTAAATGTTCTTATTAGTGACAGGTGAGAAATTGGTTTT  300

seq1  TGTGGTTTATTAGAATCAGGAAATGTACATGTATTGTATATGTAATGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTATTAGAATCAGGAAATGTACATGTATTGTATATGTAATGTGT  350

seq1  ATGTATGACAAATGTATATGTATCATGTGGGTATTGTATGTGTATGTAT  399
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGACAAATGTATATGTATCATGTGGGTATTGTATGTGTATGTAT  399

seq1: chr2_114700971_114702067
seq2: B6Ng01-049B20.g_68_1137 (reverse)

seq1  AACTTGGTTTCAAAGCCCCAGCATTCCCAAATC-TCCTCAACTCACAGGT  49
      |||||||||   ||||||||||  | ||||||| ||||| ||||||| ||
seq2  AACTTGGTT--CAAGCCCCAGC--TTCCAAATCTTCCTC-ACTCACA-GT  44

seq1  GTGGTCATGAGTGGTAACCCATGTTGGGAGGCAGGTCAGGTACATGCTGG  99
      |||||| ||| ||   |||||||||||||| || |||| |||||||||||
seq2  GTGGTCCTGATTG--TACCCATGTTGGGAGCCA-GTCA-GTACATGCTGG  90

seq1  GGTTTGATGACTAGGCAGCCTAGTAAAAATAGCTAGCTTCAGGTTCAGCA  149
      ||||||||||||| ||||||||||  ||||||||||||||| ||||||| 
seq2  GGTTTGATGACTA-GCAGCCTAGT--AAATAGCTAGCTTCA-GTTCAGC-  135

seq1  AGAGACCCTATCCCAGGAGAATAAGGCAGTGAAAGATGAGGACCCTTGGT  199
      ||||||||||||||||||| |||| |||||||||||||| ||||||||||
seq2  AGAGACCCTATCCCAGGAG-ATAA-GCAGTGAAAGATGA-GACCCTTGGT  182

seq1  GTTCTCCTTTGTCATCTTCATGCAGACACATGGGCATTTGCATATACATA  249
      | ||| ||||||||||||||||||||||||| |||| |||||||||||| 
seq2  G-TCT-CTTTGTCATCTTCATGCAGACACAT-GGCA-TTGCATATACATT  228

seq1  TCCCCCTCTGTCTTTCTCTGTCTCTCTCTGTCTCTGTCTCTGTCTCTCTC  299
      |||||||| ||||||||| ||||||||| ||||||||||| |||||||||
seq2  TCCCCCTC-GTCTTTCTCCGTCTCTCTC-GTCTCTGTCTC-GTCTCTCTC  275

seq1  TGTCTCTGTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTCTCTCTC  349
      |||||||||||||||||| ||||||||| ||||| |||||||||||||||
seq2  TGTCTCTGTCTCTGTCTC-GTCTCTCTC-GTCTC-GTCTCTCTCTCTCTC  322

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTGGCAGTTATCTAACATTACCTGTTC  399
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCGGGCAGTTATCTAACATTACCTGTTC  372

seq1  TAAAACTGTCTAAAAGGATAATAAAATCTGCACAAATCCTAATTTACATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGTCTAAAAGGATAATAAAATCTGCACAAATCCTAATTTACATG  422

seq1  AAAAGAATTTCTTTAGAAAATGCTACAAAAATATAAATTTTTTGTTATAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTTCTTTAGAAAATGCTACAAAAATATAAATTTTTTGTTATAT  472

seq1  CATACACAAATTTTGGCACTTGTATTTCTTTTTCTTAAACATTAAATTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAAATTTTGGCACTTGTATTTCTTTTTCTTAAACATTAAATTTT  522

seq1  TTTATTAACAGTATAAAATATTTAATGTTGATAGAAAATTTCAACTCTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAACAGTATAAAATATTTAATGTTGATAGAAAATTTCAACTCTTA  572

seq1  CATATCATCTGGTATGTAAAAACACATTTTAAACTTAAGGTAGCCCTAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCATCTGGTATGTAAAAACACATTTTAAACTTAAGGTAGCCCTAGG  622

seq1  ACAAATCACAGTGATTTTCAGGTTTTGTTTTGTGTTTGAAACAAGGACAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCACAGTGATTTTCAGGTTTTGTTTTGTGTTTGAAACAAGGACAC  672

seq1  CTGTAGCTCTGCTGGGTCACTAACTAGTTATGTGGATCAGATTGGCCTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTCTGCTGGGTCACTAACTAGTTATGTGGATCAGATTGGCCTGC  722

seq1  AAACCATTATCCTCCTGCCTCACTTCCCATGTGCTGCTTTTACAGATGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTATCCTCCTGCCTCACTTCCCATGTGCTGCTTTTACAGATGTG  772

seq1  CATCACCATGCTGTCTAATTAAGTAAAGGGTGTTCATAGATTCTAACATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCATGCTGTCTAATTAAGTAAAGGGTGTTCATAGATTCTAACATA  822

seq1  CTCATCTTCTTCTAAATAATGGCCAGTTCTCCAACATAAGGCATGCTACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTCTTCTAAATAATGGCCAGTTCTCCAACATAAGGCATGCTACT  872

seq1  TTACCATCTCAGGAAAAAAGCTAGAGGAGTTGGGGTGGAGATCATACATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATCTCAGGAAAAAAGCTAGAGGAGTTGGGGTGGAGATCATACATT  922

seq1  TTCAAGTTTTTAAGTGTTTAAGAGATAGTCTTAAGCTTTTATTTTTCCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTTTTTAAGTGTTTAAGAGATAGTCTTAAGCTTTTATTTTTCCTT  972

seq1  GTCTGCAGTTCAGCTTCTCAGTGTGATTTAAATTCTTGACAAGAACTTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGTTCAGCTTCTCAGTGTGATTTAAATTCTTGACAAGAACTTTA  1022

seq1  GGAATATTTGTTTGAGATTGCTGGTAGAGCATCTTTACAGAAGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTTGTTTGAGATTGCTGGTAGAGCATCTTTACAGAAGAATTC  1070