BAC Information

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BAC

Clone NameB6Ng01-049N07
Chromosome2 (Build37)
Map Location 142,776,626 - 142,777,180
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049N07.bB6Ng01-049N07.g
ACCDH873973DH873974
length7181,100
definitionDH873973|Mus musculus domesticus DNA, BAC clone: B6Ng01-049N07, 5' end.DH873974|Mus musculus domesticus DNA, BAC clone: B6Ng01-049N07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccttcttgagttctttatatatgttggatattagtcccctat
ctgatttaggataggtaaagatcctttcccaatctgttggtggtcttttt
gtcttattgacggtatcttttgcgttgcagaaactttggagtttcattag
gtcccatttgtcaattctcgatcttactgcacaagccattgctgttctgt
tcagaatttttcccctgtgcccatatcttcaaggcttttccccactttct
cttctataagtttcagtgtctctggttttatgtgaagttccttgatccac
ttagatttgaccttagtacaaggagaaaagtatggatcgattcgcattct
tctacatgataacaaccagttgtgccagcaccaattgctgaaaatgctgt
ctttcttccactggatggttttagcttccatgtcgaagatcaagtgacca
taggtgtgtgggttcatttctgggtcttcaattctgttccattggtctac
ttgtctgtctctataccagtaccatgcagtttttatcacaattgctctgt
agtaaagctttaggtcagggcatggtgattccaccagaggtttcttttat
ccttgagaagactttttgctatcctaggttttttgttattccagatgaat
ttgcagattgctctttctaattcgttgaagaattgagttggaattttgat
ggggattgcattgatctg
gaattctcacctgaggaataccaaatggaagagaagcacctgaaaaaatg
ttcaacatttttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttcttgcaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatcctacaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaagaacacatgctccacta
tgttcatagcagccttgtttataatagccagaagctggaaagaacctaga
tgcccctcgacagaggaatgtacacagaaaatgaggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaacc
taggatacccaagaaataagatacaatttcctaaacacatgaaactcaag
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggtaa
aaacacccatgggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatcttgagactgccatatccagggatccaccccatatcag
catcaaactctgaccctatgcatacactagcaagattttatcgaaaggac
ccagatgtagctgtctctgtgagactatgccgggctagcaaccagagagg
attctcccgtcagtatggatcgatccaggctcctaatggagaactagaaa
gtctagggactaagatcctgacactagtgacaacttagactacagatctc
ggaccttgacttgctgctatgtatcaagagcctaatcgtcatcggagagc
cattgacaccacttatgtccgtacggtatgctggcaaggatagtctgagt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776626_142777180
seq2: B6Ng01-049N07.b_54_607 (reverse)

seq1  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  50

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAACAGAATTGAAGACCCAGAAATGAACCCA  100

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  150
      |||||||||||||||||||||||||||| || |||||||||||||||| |
seq2  CACACCTATGGTCACTTGATCTTCGACATGGAAGCTAAAACCATCCAGTG  150

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAGCAATTGGTGCTGGCACAACTGGTTGTTAT  200

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  250
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  CATGTAGAAGAATGCGAATCGATCCATACTTTTCTCCTTGTACTAAGGTC  250

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  300

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  350
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGAAGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  350

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  400
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATT-CTGAACAGAACAGCAATGGCTTGTGCAGTAAGATCGAGAATTGAC  399

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  450
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAACGCAAAAGATACCGT  449

seq1  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  499

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  549

seq1  GTGGA  555
      |||||
seq2  GTGGA  554