BAC Information

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BAC

Clone NameB6Ng01-050B06
Chromosome2 (Build37)
Map Location 47,793,464 - 47,794,543
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050B06.bB6Ng01-050B06.g
ACCDH874136DH874137
length1,0741,069
definitionDH874136|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B06, 5' end.DH874137|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagaccaggaatgtgtgttggattttttcaaat
gcattctcagcatctaacgagatgatcatgtggtttctattttaggactt
gtttatatagtggattacgttgatggatttccatatattaaaatatccct
acaaccctggaatgaaacctacttgatcctgatgaacaattgttttgata
tattcttggattcggttactgagaattttattgagtatttttgcatccat
attcataagggaaattggtctgaagttttctttctttgttgggtctttat
gttgtttgggtatcagagtaattgtggcttcatagaatgaattgggtaga
gtccttctgtttctattttgtggaatagtttgaggagaactggaattagg
tcttctttgaaagtctgatagaattctgcactaaacccagctgttcttgg
gcttttttgttgtttttgttgttcagagtctattagtgactgcttctatt
actttaggggatattggagtgtttagatcgttaatctgatcctgatttaa
ctttggtacctggtctgtgtctaaaaatttgtccatttcatccaggtttt
ctagttttgttgagtatagccttttgtaataggatctgatgattttttgg
atttcctcagttctgttatgactcccctttcttttctgattttgttaatt
aggatactgtccctgtgccctctaatgagtctggctaagggtttatatat
cttgttgattttctcaaagtaccagctcctggtttggttgatttttttga
atagttgtttttgtttccacttggttgatttcagccctaagtttgataat
tcctgccatctatactcttgggtgaatttgctccttttgtctagagctta
agtgtgtgtcagctgctagtgtatgctctctctagttctttttgaggcac
tctaggcatgagtttcccttaggaatgctcgtgtacccataattgaggaa
gtgtgcgtaatttcataaaccctagaggccttataccttctctattctcc
ttgagcaaggataatgatagaagt
gaattcctttagatggattagagtgttgcctcagtagttaatagcacttg
tttttcttgcagaggactgaggtttggttcctataataatgattcacaac
taccctaaactcaaattacagggaatcatgacaatcacatcaaggttcaa
atcccacagaagtttcaggtgaaatttaattataaatattgaatgcattg
gaatgttgcttaatctatacttatttttcttacgtatttggataacaagt
ttagcaaacttgttatccaaatccctatgtagacttacattgtggtaaat
ttaaagagatatacacgtatctttcttgactctttattgtcaccaatatg
tcctgtcttcatgcacaggacctggctcattgtctctctcttaatcttcc
tctctcctgatgtcattgcactgtgaaatataaatgaaagctgcttgata
aatatattaaaaaattatgattcttttcaaaaacagctctcagtcagaga
gctatctttatttctattttgtgtatttatgatgaatatatttgctttca
cctcctcctgcgtccctttccttgtcttcatcttttcattctctttttct
cccctacttcttgctcttccacctctgtgtgtatcagtttttacacacac
acacacacacacacacacacacacacacacacacacacacacacacttac
ttgaacaatttgatgaaccaaagttctgttttaatcatggatatgatgga
aaatgatttccaacagctacttctctcaagcattacataggttcagaacc
ctcataatcaaaattctgtgaaaagagctatctctataacttaatttaaa
ggtaaacagaaactagtatccatgccatctcagcatgtcaacaaaccgta
gtttgagatactataactgtctactccccttgtattaaatgtgctgaaac
ccagttgtggttgtacttggtagcaatagcagcattgactctcagtgttc
catgtctctgttttatcatgatatgagagaaaatgatttccacaccactt
tggtttattggtttgaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47793464_47794543
seq2: B6Ng01-050B06.g_66_1134 (reverse)

seq1  TCTTCAAAACACAATAAAACCAAAAGTAGCTGTTAGAAATCATTCTCCTT  50
      ||||||||   |||||||  | ||||| | || | ||||||||| ||  |
seq2  TCTTCAAA--CCAATAAA--CCAAAGT-GGTG-TGGAAATCATTTTCTCT  44

seq1  CATATCCATGATTAAAACAGAGACATGGAACACTGAGAGTCAATGCTGCT  100
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATAT-CATGA-TAAAACAGAGACATGGAACACTGAGAGTCAATGCTGCT  92

seq1  ATTGCCTACCAAGGTAACAACCACAACTGGGTTTCAGCACATTTAATACA  150
      |||| ||||||||   ||||||||||||||||||||||||||||||||||
seq2  ATTG-CTACCAAG--TACAACCACAACTGGGTTTCAGCACATTTAATACA  139

seq1  AGGGGAGTAGACAGTTATAGTATCTCAAACTACGGTTTGTTGACATGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTAGACAGTTATAGTATCTCAAACTACGGTTTGTTGACATGCTG  189

seq1  AGATGGCATGGATACTAGTTTCTGTTTACCTTTAAATTAAGTTATAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCATGGATACTAGTTTCTGTTTACCTTTAAATTAAGTTATAGAGA  239

seq1  TAGCTCTTTTCACAGAATTTTGATTATGAGGGTTCTGAACCTATGTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTTTTCACAGAATTTTGATTATGAGGGTTCTGAACCTATGTAATG  289

seq1  CTTGAGAGAAGTAGCTGTTGGAAATCATTTTCCATCATATCCATGATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGAAGTAGCTGTTGGAAATCATTTTCCATCATATCCATGATTAA  339

seq1  AACAGAACTTTGGTTCATCAAATTGTTCAAGTAAGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACTTTGGTTCATCAAATTGTTCAAGTAAGTGTGTGTGTGTGTGT  389

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAACTGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAACTGATAC  439

seq1  ACACAGAGGTGGAAGAGCAAGAAGTAGGGGAGAAAAAGAGAATGAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGGTGGAAGAGCAAGAAGTAGGGGAGAAAAAGAGAATGAAAAGA  489

seq1  TGAAGACAAGGAAAGGGACGCAGGAGGAGGTGAAAGCAAATATATTCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACAAGGAAAGGGACGCAGGAGGAGGTGAAAGCAAATATATTCATC  539

seq1  ATAAATACACAAAATAGAAATAAAGATAGCTCTCTGACTGAGAGCTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACACAAAATAGAAATAAAGATAGCTCTCTGACTGAGAGCTGTTT  589

seq1  TTGAAAAGAATCATAATTTTTTAATATATTTATCAAGCAGCTTTCATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGAATCATAATTTTTTAATATATTTATCAAGCAGCTTTCATTTA  639

seq1  TATTTCACAGTGCAATGACATCAGGAGAGAGGAAGATTAAGAGAGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACAGTGCAATGACATCAGGAGAGAGGAAGATTAAGAGAGAGACA  689

seq1  ATGAGCCAGGTCCTGTGCATGAAGACAGGACATATTGGTGACAATAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCAGGTCCTGTGCATGAAGACAGGACATATTGGTGACAATAAAGA  739

seq1  GTCAAGAAAGATACGTGTATATCTCTTTAAATTTACCACAATGTAAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAAAGATACGTGTATATCTCTTTAAATTTACCACAATGTAAGTCT  789

seq1  ACATAGGGATTTGGATAACAAGTTTGCTAAACTTGTTATCCAAATACGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGATTTGGATAACAAGTTTGCTAAACTTGTTATCCAAATACGTA  839

seq1  AGAAAAATAAGTATAGATTAAGCAACATTCCAATGCATTCAATATTTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAAGTATAGATTAAGCAACATTCCAATGCATTCAATATTTATA  889

seq1  ATTAAATTTCACCTGAAACTTCTGTGGGATTTGAACCTTGATGTGATTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTTCACCTGAAACTTCTGTGGGATTTGAACCTTGATGTGATTGT  939

seq1  CATGATTCCCTGTAATTTGAGTTTAGGGTAGTTGTGAATCATTATTATAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTCCCTGTAATTTGAGTTTAGGGTAGTTGTGAATCATTATTATAG  989

seq1  GAACCAAACCTCAGTCCTCTGCAAGAAAAACAAGTGCTATTAACTACTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAACCTCAGTCCTCTGCAAGAAAAACAAGTGCTATTAACTACTGA  1039

seq1  GGCAACACTCTAATCCATCTAAAGGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  GGCAACACTCTAATCCATCTAAAGGAATTC  1069