BAC Information

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BAC

Clone NameB6Ng01-050I06
Chromosome2 (Build37)
Map Location 142,776,326 - 142,776,881
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050I06.bB6Ng01-050I06.g
ACCDH874436DH874437
length1,076910
definitionDH874436|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I06, 5' end.DH874437|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccacatttttgtatgggggttatttgat
tttctgaagttcaccttgagttctttatatatgttgcatattagtaccct
atctgatttaggataggtaaagatcctttcccaatctgttggtggtcttt
ttgttttattgatggtgtcttttgccttgcagaaactttggagtttcatt
aggtcccatttgtcaattctcgatcttacagcacaagccatttctgttct
gttcaggaatttttcccctgtgcccatatcttcaaggcttttcccccctt
tctcctctataaatttcagtgcctctggttttatgtgaagttccttgatc
cacttagatttgaccatattagaaggagataagcatggatcgattcgcat
tcttctacatgattacaactagttgtgccagcaccaattgttgaaaatgc
tgtctttcttccactgcaacgttttagctcccttgtcgaatatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctgttccattggtc
tacgtgtctgtctctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagcttaggttaggcatggtgattccaccagatgttctgttat
ccttgagaagagtttttaccatcctaggattttttgttattccagatgaa
tttgcaaattttctccttctaatccgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccaattt
ttacaatgttgatcctgccaatccatgagcatgggagattctttccatct
tctgagatcttctttatttctttctcagagacttgaagtttttatcatac
agatcattcactttcttagttaggagtcacgccgagatattttatattat
ttgtgactataaagaaggtgttgttccctaactctttccagctattttat
cttgttgtgagaaaggcgatggctggatgagtaatttaatccgtcactcc
ccgagcctttatcgggtagggtctac
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgccttttgccttgcagaaaatttggagtttca
ctaggtcccgtttgtcaattttcgatcttacagcacaagccattgctgtt
ccgttcaggaatttatcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttactacaaggagatatgtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctctcttgtcgaagatcaagt
gaccatcggtgtgtgggttcatttctgggtcttcaattctgttccattgg
tctacttgtctgtctctataccagtatcatgcagttttttatcacaaatg
ctctgtagctttagatcaggcatggtgattccaccagaggttcttttatc
cttgagaagagtttttgttatcctaggttttttgttatttcagatgaatt
tccaaattgctccttgtaattcgttgaagatttgagttggaatttttgat
ggggattgcattgaatctgtagattgatttttgcaagataagcattttta
caatgtggttcatgccattccatgagcatgggagatcttttccatcttct
aaatcttctttaattccttctaacagagacttgaaagttttatcacacag
atctttcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776326_142776881
seq2: B6Ng01-050I06.g_424_976 (reverse)

seq1  AGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTA  50
      |||||||||||||| ||||||||  ||||||||||||    ||| |||||
seq2  AGTGAAAGATCTGTGTGATAAAACTTTCAAGTCTCTGTTAGAAGGAATTA  50

seq1  AAGAAGATCTCAGAAGATGG-AAGGATCTCCCATGCTCATGGATTGGCAG  99
      |||||||| | ||||||||| || ||||||||||||||||||| ||||| 
seq2  AAGAAGAT-TTAGAAGATGGAAAAGATCTCCCATGCTCATGGAATGGCAT  99

seq1  GATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCA  149
      || | ||||||||||||||  |||||||| |||| |||||||||||||||
seq2  GAACCACATTGTAAAAATGCTTATCTTGCAAAAATCAATCTACAGATTCA  149

seq1  ATGCAATCCCCATC-AAAATTCCAACTCAATTCTTCAACGAATTAGAAGG  198
      |||||||||||||| ||||||||||||||| |||||||||||||| ||||
seq2  ATGCAATCCCCATCAAAAATTCCAACTCAAATCTTCAACGAATTACAAGG  199

seq1  AGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAA  248
      ||||||||| ||||||||||| ||||||||||||||||||||| ||||||
seq2  AGCAATTTGGAAATTCATCTGAAATAACAAAAAACCTAGGATAACAAAAA  249

seq1  GTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTA  298
       ||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGATCTA  299

seq1  AAGCTTTACTACAGAGCAATTGTGAT-AAAAACTGCATGGTACTGGTATA  347
      |||     |||||||||| ||||||| |||||||||||| ||||||||||
seq2  AAG-----CTACAGAGCATTTGTGATAAAAAACTGCATGATACTGGTATA  344

seq1  GAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAAC  397
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGACAGACAAGTAGACCAATGGAACAGAATTGAAGACCCAGAAATGAAC  394

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  447
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  CCACACACCGATGGTCACTTGATCTTCGACAAGAGAGCTAAAACCATCCA  444

seq1  GAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGT  497
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGT  494

seq1  TATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAG  547
      ||||||||||||||||| |||||||||||||| |||||||||||| ||||
seq2  TATCATGTAGAAGAATGTGAATCGATCCATACATATCTCCTTGTAGTAAG  544

seq1  GTCAAATCT  556
      |||||||||
seq2  GTCAAATCT  553