BAC Information

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BAC

Clone NameB6Ng01-051A20
Chromosome2 (Build37)
Map Location 4,139,447 - 4,310,728
singlet/doubletdoublet
Overlap geneFrmd4a
Upstream gene9630050M13Rik, Nmt2, Rpp38, Acbd7, Olah, Meig1, Dclre1c, Suv39h2, Hspa14, Armetl1, LOC100040219, LOC666495, 3110001A13Rik, LOC100040257, LOC100040163, LOC666944, 1700080N15Rik, EG634452
Downstream genePrpf18, LOC623483, E130319B15Rik, LOC666973, Sephs1, Phyh, LOC381346, LOC100040250, LOC100040426, 1110017I16Rik, Mcm10, Optn, Ccdc3, LOC100040292, Camk1d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051A20.bB6Ng01-051A20.g
ACCDH874810DH874811
length4031,066
definitionDH874810|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A20, 5' end.DH874811|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,310,349 - 4,310,728)(4,139,447 - 4,140,514)
sequence
gaattcagagcagagaaaatgaaagccatcagacgctctcagcacttgga
gggctcttccctattccccgcccagacactctctgacacttacaggcacc
tgccaggggaggaaccggcccaggggaggggtcttgcctagactgtgcct
ccaggtaaacctgtggacattcagaattcgaacagagagcttccctcttg
gagccacaggcaccctcctctgcagctgtcacctgggttattgcagagca
cacaagcacacagccagaggctacttcccactgtgctgagccaaattcct
tatagtacaaaaagcacctaaagttcgcagtctctccctctccctctccc
tctccctctccccctccccctccctctccctctctctctctctctctctc
tct
gaattctcataagttctggcatggatgctccctcaaaccaatacagtgcg
tttacatgcatatctctgtgtggaccaagaggaagagaagaactgcacat
aaacaataggataggatggccccagacaatgattgactttgctgggctga
gtgtaaagctggaagaatccgcataaatgaccaagaaagggaatcaaggg
ggcagttgagttcttagcttataaagttgttttggcttcagtcattctgt
cggaggctaagcgctgtcttctgccctagttcctattcttgccgctgtaa
tcaagtgcgtgaccaaagcatcttacaggggggtggggcacggaggggag
gacgggtctgctgtggctcatagttcagaatgcacgttcctacacagcag
cagagtggagagccagtggcaaatagtttagtgtcttccaaaaatcgaca
ctttctgttccttcgtgaataaagaatgcagaataggtaaaggagatgag
ttagttgataatgccctcaacaggacatctggggaataatgcagcgctgt
catgtttccctgtccagcctgtgctcatgtctcatccaaactcccaagcc
ctacacagaagcctcacgttttccagggctaagagggctgagctccatgc
aaactggttgctccaaacttactcacattaagttctcattggtaactttg
ggggatgggaaatatctaatcctgaacatatttattttgtaaaagttgga
ttaagaaggttggtgcctggtgagatagcttacttgtagcttacgtgaca
ggacctgagataatccccaagagccatattatcaacaaatctaggcctgg
gtggtgtacattgaataaatgtctcctatgggaatccaattagtgtggac
cttatttgcatgtgttatagctgaccacctagactggggtctctcatccc
tgaaaaatcaaacatacaaagaattcagctctctcctccctcagcagccc
tgactacctatatcttcttcatctaggaacaagccttaagaaattttcct
cgtccattgttgcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_4310349_4310728
seq2: B6Ng01-051A20.b_41_420 (reverse)

seq1  GGGAGGGGGAGGGGGAGGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGA  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGGAGGGGGAGGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGA  50

seq1  CTGCGAACTTTAGGTGCTTTTTGTACTATAAGGAATTTGGCTCAGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGAACTTTAGGTGCTTTTTGTACTATAAGGAATTTGGCTCAGCACAG  100

seq1  TGGGAAGTAGCCTCTGGCTGTGTGCTTGTGTGCTCTGCAATAACCCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGTAGCCTCTGGCTGTGTGCTTGTGTGCTCTGCAATAACCCAGGT  150

seq1  GACAGCTGCAGAGGAGGGTGCCTGTGGCTCCAAGAGGGAAGCTCTCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGCAGAGGAGGGTGCCTGTGGCTCCAAGAGGGAAGCTCTCTGTT  200

seq1  CGAATTCTGAATGTCCACAGGTTTACCTGGAGGCACAGTCTAGGCAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTCTGAATGTCCACAGGTTTACCTGGAGGCACAGTCTAGGCAAGAC  250

seq1  CCCTCCCCTGGGCCGGTTCCTCCCCTGGCAGGTGCCTGTAAGTGTCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCTGGGCCGGTTCCTCCCCTGGCAGGTGCCTGTAAGTGTCAGAG  300

seq1  AGTGTCTGGGCGGGGAATAGGGAAGAGCCCTCCAAGTGCTGAGAGCGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGGGCGGGGAATAGGGAAGAGCCCTCCAAGTGCTGAGAGCGTCT  350

seq1  GATGGCTTTCATTTTCTCTGCTCTGAATTC  380
      ||||||||||||||||||||||||||||||
seq2  GATGGCTTTCATTTTCTCTGCTCTGAATTC  380

seq1: chr2_4139447_4140514
seq2: B6Ng01-051A20.g_65_1130

seq1  GAATTCTCATAAGTTCTGGCATGGATGCTCCCTCAAACCAATACAGTGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATAAGTTCTGGCATGGATGCTCCCTCAAACCAATACAGTGCG  50

seq1  TTTACATGCATATCTCTGTGTGGACCAAGAGGAAGAGAAGAACTGCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGCATATCTCTGTGTGGACCAAGAGGAAGAGAAGAACTGCACAT  100

seq1  AAACAATAGGATAGGATGGCCCCAGACAATGATTGACTTTGCTGGGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATAGGATAGGATGGCCCCAGACAATGATTGACTTTGCTGGGCTGA  150

seq1  GTGTAAAGCTGGAAGAATCCGCATAAATGACCAAGAAAGGGAATCAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAGCTGGAAGAATCCGCATAAATGACCAAGAAAGGGAATCAAGGG  200

seq1  GGCAGTTGAGTTCTTAGCTTATAAAGTTGTTTTGGCTTCAGTCATTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTGAGTTCTTAGCTTATAAAGTTGTTTTGGCTTCAGTCATTCTGT  250

seq1  CGGAGGCTAAGCGCTGTCTTCTGCCCTAGTTCCTATTCTTGCCGCTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCTAAGCGCTGTCTTCTGCCCTAGTTCCTATTCTTGCCGCTGTAA  300

seq1  TCAAGTGCGTGACCAAAGCATCTTACAGGGGGGTGGGGCACGGAGGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGCGTGACCAAAGCATCTTACAGGGGGGTGGGGCACGGAGGGGAG  350

seq1  GACGGGTCTGCTGTGGCTCATAGTTCAGAATGCACGTTCCTACACAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGTCTGCTGTGGCTCATAGTTCAGAATGCACGTTCCTACACAGCAG  400

seq1  CAGAGTGGAGAGCCAGTGGCAAATAGTTTAGTGTCTTCCAAAAATCGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGAGAGCCAGTGGCAAATAGTTTAGTGTCTTCCAAAAATCGACA  450

seq1  CTTTCTGTTCCTTCGTGAATAAAGAATGCAGAATAGGTAAAGGAGATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTCCTTCGTGAATAAAGAATGCAGAATAGGTAAAGGAGATGAG  500

seq1  TTAGTTGATAATGCCCTCAACAGGACATCTGGGGAATAATGCAGCGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGATAATGCCCTCAACAGGACATCTGGGGAATAATGCAGCGCTGT  550

seq1  CATGTTTCCCTGTCCAGCCTGTGCTCATGTCTCATCCAAACTCCCAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCCCTGTCCAGCCTGTGCTCATGTCTCATCCAAACTCCCAAGCC  600

seq1  CTACACAGAAGCCTCACGTTTTCCAGGGCTAAGAGGGCTGAGCTCCATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGAAGCCTCACGTTTTCCAGGGCTAAGAGGGCTGAGCTCCATGC  650

seq1  AAACTGGTTGCTCCAAACTTACTCACATTAAGTTCTCATTGGTAACTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGTTGCTCCAAACTTACTCACATTAAGTTCTCATTGGTAACTTTG  700

seq1  GGGGATGGGAAATATCTAATCCTGAACATATTTA-TTTGTAAAAGTTGGA  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGGGATGGGAAATATCTAATCCTGAACATATTTATTTTGTAAAAGTTGGA  750

seq1  TTAAGAAGGTTGGTGCCTGGTGAGATAGCTTACTTGTAGCTTACGTGACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGGTTGGTGCCTGGTGAGATAGCTTACTTGTAGCTTACGTGACA  800

seq1  GGACCTGAGATTAATCCCCAAGAGCCATATTATCAACAAATCTAGGCCTG  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGAGA-TAATCCCCAAGAGCCATATTATCAACAAATCTAGGCCTG  849

seq1  GGTGGTGTACATTGAATATATGTCTCCTAT-GGAATCCAATTAGTGTGGA  898
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  GGTGGTGTACATTGAATAAATGTCTCCTATGGGAATCCAATTAGTGTGGA  899

seq1  CCTTATTTGCATGTGTTTATAGCTGACCACCTAGGACTGGGGTCTCTCAT  948
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  CCTTATTTGCATGTG-TTATAGCTGACCACCTA-GACTGGGGTCTCTCAT  947

seq1  CCCTGAAAAATCAAACATACAAAAGAAATCAGCTCTCT-CTCCCTCAGCA  997
      |||||||||||||||||||| |||||| |||||||||| |||||||||||
seq2  CCCTGAAAAATCAAACATAC-AAAGAATTCAGCTCTCTCCTCCCTCAGCA  996

seq1  GCCCCTGACTACCTATA-CCTCTTCATCTAGGAACAAGCCTTATGAAATT  1046
      | ||||||||||||||| | ||||||||||||||||||||||| ||||||
seq2  G-CCCTGACTACCTATATCTTCTTCATCTAGGAACAAGCCTTAAGAAATT  1045

seq1  TTCCTCTGTCCATGTTGGCCTC  1068
      |||||| ||||||  | |||||
seq2  TTCCTC-GTCCATTGTTGCCTC  1066