BAC Information

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BAC

Clone NameB6Ng01-051I13
Chromosome2 (Build37)
Map Location 112,486,423 - 112,633,791
singlet/doubletdoublet
Overlap geneRyr3
Upstream geneOlfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I13.bB6Ng01-051I13.g
ACCDH875143DH875144
length1,156841
definitionDH875143|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I13, 5' end.DH875144|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,486,423 - 112,487,590)(112,632,951 - 112,633,791)
sequence
gaattctcactactccagctaagactcacttcctgactgttcatctgcta
agatgctaggctcagaaatatctttgccattttcacctactagagctccc
aaaaggctacagacaaaaccctttcccatgaaacagaggaatgactgatt
gtgtcccatcagtccttagaatcagagagagaaaatgttggtccttcaaa
ccaactttggagtggcttgttacatctataactgaaacagaaatacatca
tagagatccatctcaggtctcaaatggttccagcctaatggaaaggtaca
tttatttttaaaaaatccaatggcaactcaaagatcacaagaagctttca
tggctaatttcacttgtgccctagcctggtgactcagatactaagaggta
cttgaagtgcttctcctacagcaagaattaactttgtctatagctcactt
cacagattctcattcaaaagcctcaagtcggtgattgagatcctgcagtt
gtaagcagcttgtgggtggcagtactcgtaatgtcccaccagccttactc
tcctagcacttttggagactaagcactgatggaacttaaaaaaaaatgac
acttcttcctcaaggagtcagaaaagagagtgtcagatggttagaatgct
caccttcaggcagtaatagcccaccacacagaccagagagatgatggtgt
ggacaatggccaaagcacgcagtgttggtgccatataaccagtgctctcc
tgaagaacaaagaacaccatcgcttcttcctcgtcatcatcattgaatga
gttccacaggtttgcaacatcctctgtctcttcctctaaaggttcttcag
tgacctggcccaagacacatacccaccaccatcagaaggagcctcagtta
ctaggctcttcctacagtttatattattatagatacatatgctatcaaga
ccagcattacctgtggattaaatgggtcctttactaacttactgataaga
atccccagttttttctaatagctgcaaataaaaatgaggtaaagacaaaa
tctttttcttgaaaagaaacaaaaaaatttaattatggaccttactatct
gtaatcctatggcgagagagagcagcacaggtcatgtggaggcccagtta
ccacat
gaattcaggatctgaggctggagagatttctcggtgcttaagggcactgg
ctgcttttccagagaactaggatttgcctccacatggcagttccagtctt
gaggtatccaactttctcttctgacctcgtgggcactagacatgcatgaa
gtacagatacacacatgcataccaaacacacatgcacataacaataattc
tctagacacactatatttgtttggggcaaagtatggcaatttctacttta
aaaggaattcagggccttttaaagaggagtatatgtacacagagatcact
attttaaaaaataaatggcgtaaaggcagggagtgggcactcaagagcat
aaagagagtaaatgtgtccctatgagatgatcagagaagacactgtgaag
gaggcagcattagaaaagaacctaacatgtcaagtttctagaaacaaagg
caggagaggttagccaataagaatgcaccgtgtacatgctctggagacta
aggcacactgttctcagtgaactgggacctgtcgctccagcaggtgactg
tgtggaggacagtggtaggtgaggtttgaaaggcaggtcgatggttatga
taaggagaacataaatgacaagctgaactgtttagcatcagccctttgtg
tagagaactgagaaacctttctaacaggagacagagtgacaggtactact
gacagattctgtcctcaggttaaatcgaattataatggtaaagatagaga
tagatgagaggaaatacatttgaaagagattacaaacaaagaattacttg
tactgctgctaatggtagtggtggtgatgatgggggtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112486423_112487590
seq2: B6Ng01-051I13.b_45_1200

seq1  GAATTCTCACTACTCCAGCTAAGACTCACTTCCTGACTGTTCATCTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTACTCCAGCTAAGACTCACTTCCTGACTGTTCATCTGCTA  50

seq1  AGATGCTAGGCTCAGAAATATCTTTGCCATTTTCACCTACTAGAGCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTAGGCTCAGAAATATCTTTGCCATTTTCACCTACTAGAGCTCCC  100

seq1  AAAAGGCTACAGACAAAACCCTTTCCCATGAAACAGAGGAATGACTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTACAGACAAAACCCTTTCCCATGAAACAGAGGAATGACTGATT  150

seq1  GTGTCCCATCAGTCCTTAGAATCAGAGAGAGAAAATGTTGGTCCTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCATCAGTCCTTAGAATCAGAGAGAGAAAATGTTGGTCCTTCAAA  200

seq1  CCAACTTTGGAGTGGCTTGTTACATCTATAACTGAAACAGAAATACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTGGAGTGGCTTGTTACATCTATAACTGAAACAGAAATACATCA  250

seq1  TAGAGATCCATCTCAGGTCTCAAATGGTTCCAGCCTAATGGAAAGGTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATCCATCTCAGGTCTCAAATGGTTCCAGCCTAATGGAAAGGTACA  300

seq1  TTTATTTTTAAAAAATCCAATGGCAACTCAAAGATCACAAGAAGCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTAAAAAATCCAATGGCAACTCAAAGATCACAAGAAGCTTTCA  350

seq1  TGGCTAATTTCACTTGTGCCCTAGCCTGGTGACTCAGATACTAAGAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAATTTCACTTGTGCCCTAGCCTGGTGACTCAGATACTAAGAGGTA  400

seq1  CTTGAAGTGCTTCTCCTACAGCAAGAATTAACTTTGTCTATAGCTCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTGCTTCTCCTACAGCAAGAATTAACTTTGTCTATAGCTCACTT  450

seq1  CACAGATTCTCATTCAAAAGCCTCAAGTCGGTGATTGAGATCCTGCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTCTCATTCAAAAGCCTCAAGTCGGTGATTGAGATCCTGCAGTT  500

seq1  GTAAGCAGCTTGTGGGTGGCAGTACTCGTAATGTCCCACCAGCCTTACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAGCTTGTGGGTGGCAGTACTCGTAATGTCCCACCAGCCTTACTC  550

seq1  TCCTAGCACTTTTGGAGACTAAGCACTGATGGAACTTAAAAAAAAATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCACTTTTGGAGACTAAGCACTGATGGAACTTAAAAAAAAATGAC  600

seq1  ACTTCTTCCTCAAGGAGTCAGAAAAGAGAGTGTCAGATGGTTAGAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCCTCAAGGAGTCAGAAAAGAGAGTGTCAGATGGTTAGAATGCT  650

seq1  CACCTTCAGGCAGTAATAGCCCACCACACAGACCAGAGAGATGATGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCAGGCAGTAATAGCCCACCACACAGACCAGAGAGATGATGGTGT  700

seq1  GGACAATGGCCAAAGCACGCAGTGTTGGTGCCATATAACCAGTGCTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATGGCCAAAGCACGCAGTGTTGGTGCCATATAACCAGTGCTCTCC  750

seq1  TGAAGAACAAAGAACACCATCGCTTCTTCCTCGTCATCATCATTGAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACAAAGAACACCATCGCTTCTTCCTCGTCATCATCATTGAATGA  800

seq1  GTTCCACAGGTTTGCAACATCCTCTGTCTCTTCCTCTAAAGGTTCTTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACAGGTTTGCAACATCCTCTGTCTCTTCCTCTAAAGGTTCTTCAG  850

seq1  TGACCTGGCCCAAGACACATACCCACCACCATCAGAAGGAGCCTCAGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGCCCAAGACACATACCCACCACCATCAGAAGGAGCCTCAGTTA  900

seq1  CTAGGCTCTTCCTACAGTTTATATTATTAATAGATACATATGCTATCAAG  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTAGGCTCTTCCTACAGTTTATATTATT-ATAGATACATATGCTATCAAG  949

seq1  ACCAGCATTACCTGTGGATTAAATGGGTCCTTTACCTAACTTACTGATAA  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCAGCATTACCTGTGGATTAAATGGGTCCTTTA-CTAACTTACTGATAA  998

seq1  GAATCCCCAG-TGTTTCTAATAGCTGCAAATAAAAATGAGGTAGAGACAA  1049
      |||||||||| | |||||||||||||||||||||||||||||| ||||||
seq2  GAATCCCCAGTTTTTTCTAATAGCTGCAAATAAAAATGAGGTAAAGACAA  1048

seq1  AATCTATTTCTTGAAAAGAAAACAAAAAAAAATTTAATTATGGACCTTTT  1099
      ||||| ||||||||||||||   | |||||||||||||||||||||  ||
seq2  AATCTTTTTCTTGAAAAGAA---ACAAAAAAATTTAATTATGGACC--TT  1093

seq1  ACTATCTGTAATCCTATGGCGAGAGAGGAGGCAGCAACAGGTCCATGTGG  1149
      |||||||||||||||||||||||||||   ||||| |||||| |||||||
seq2  ACTATCTGTAATCCTATGGCGAGAGAG--AGCAGC-ACAGGT-CATGTGG  1139

seq1  AGGCACCAGTTACGCACAT  1168
      |||| |||||||| |||||
seq2  AGGC-CCAGTTAC-CACAT  1156

seq1: chr2_112632951_112633791
seq2: B6Ng01-051I13.g_66_906 (reverse)

seq1  CATCACCACCATCATCACCACCACTACCATTAGCAGCAGTACAAGTAATT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCCCCATCATCACCACCACTACCATTAGCAGCAGTACAAGTAATT  50

seq1  CTTTGTTTGTAATCTCTTTCAAATGTATTTCCTCTCATCTATCTCTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTGTAATCTCTTTCAAATGTATTTCCTCTCATCTATCTCTATCT  100

seq1  TTACCATTATAATTCGATTTAACCTGAGGACAGAATCTGTCAGTAGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATTATAATTCGATTTAACCTGAGGACAGAATCTGTCAGTAGTACC  150

seq1  TGTCACTCTGTCTCCTGTTAGAAAGGTTTCTCAGTTCTCTACACAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTCTGTCTCCTGTTAGAAAGGTTTCTCAGTTCTCTACACAAAGGG  200

seq1  CTGATGCTAAACAGTTCAGCTTGTCATTTATGTTCTCCTTATCATAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCTAAACAGTTCAGCTTGTCATTTATGTTCTCCTTATCATAACCA  250

seq1  TCGACCTGCCTTTCAAACCTCACCTACCACTGTCCTCCACACAGTCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACCTGCCTTTCAAACCTCACCTACCACTGTCCTCCACACAGTCACCT  300

seq1  GCTGGAGCGACAGGTCCCAGTTCACTGAGAACAGTGTGCCTTAGTCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGCGACAGGTCCCAGTTCACTGAGAACAGTGTGCCTTAGTCTCCA  350

seq1  GAGCATGTACACGGTGCATTCTTATTGGCTAACCTCTCCTGCCTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGTACACGGTGCATTCTTATTGGCTAACCTCTCCTGCCTTTGTTT  400

seq1  CTAGAAACTTGACATGTTAGGTTCTTTTCTAATGCTGCCTCCTTCACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAACTTGACATGTTAGGTTCTTTTCTAATGCTGCCTCCTTCACAGT  450

seq1  GTCTTCTCTGATCATCTCATAGGGACACATTTACTCTCTTTATGCTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCTGATCATCTCATAGGGACACATTTACTCTCTTTATGCTCTTG  500

seq1  AGTGCCCACTCCCTGCCTTTACGCCATTTATTTTTTAAAATAGTGATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCACTCCCTGCCTTTACGCCATTTATTTTTTAAAATAGTGATCTC  550

seq1  TGTGTACATATACTCCTCTTTAAAAGGCCCTGAATTCCTTTTAAAGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACATATACTCCTCTTTAAAAGGCCCTGAATTCCTTTTAAAGTAGA  600

seq1  AATTGCCATACTTTGCCCCAAACAAATATAGTGTGTCTAGAGAATTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCATACTTTGCCCCAAACAAATATAGTGTGTCTAGAGAATTATTG  650

seq1  TTATGTGCATGTGTGTTTGGTATGCATGTGTGTATCTGTACTTCATGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGCATGTGTGTTTGGTATGCATGTGTGTATCTGTACTTCATGCAT  700

seq1  GTCTAGTGCCCACGAGGTCAGAAGAGAAAGTTGGATACCTCAAGACTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTGCCCACGAGGTCAGAAGAGAAAGTTGGATACCTCAAGACTGGA  750

seq1  ACTGCCATGTGGAGGCAAATCCTAGTTCTCTGGAAAAGCAGCCAGTGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATGTGGAGGCAAATCCTAGTTCTCTGGAAAAGCAGCCAGTGCCC  800

seq1  TTAAGCACCGAGAAATCTCTCCAGCCTCAGATCCTGAATTC  841
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACCGAGAAATCTCTCCAGCCTCAGATCCTGAATTC  841