BAC Information

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BAC

Clone NameB6Ng01-051K07
Chromosome2 (Build37)
Map Location 45,306,739 - 45,440,202
singlet/doubletdoublet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051K07.bB6Ng01-051K07.g
ACCDH875222DH875223
length1,1261,071
definitionDH875222|Mus musculus domesticus DNA, BAC clone: B6Ng01-051K07, 5' end.DH875223|Mus musculus domesticus DNA, BAC clone: B6Ng01-051K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,439,052 - 45,440,202)(45,306,739 - 45,307,817)
sequence
gaattctaaggaggttatgataccaggtagatattatatgatgctttcat
agttaatatttgcaacatgagatttacttgttgggaaaagaaagagttta
aaagataataaatctactctgctgtttcaacagctctcatttttatcata
ccatttaaggaaatatccacatgaattatttaaatataactaccaattct
aactatatataattctataccattaacaaagtgttccaagagcatcatgc
atttattaattcagccaacaattatttattgaatttttacaaggttttgc
actgggtgcagaagaatatcctattaaaggaaccctgagccactgtgttg
taaaacatttttgtttatttcccttgcagttttttattaagtagtttcaa
attcagcaacccatgttaaaagtcagatgcacaaacagcagcacattaaa
aacaagagatccagccagttatagtcccaaaatgtataagactattgccc
atgtcatatcaactattttgaattcagaaggtcaagtaacctacatggtc
aggatcctggtgcccactttgtagataaacatacagacaactttttatca
acaaggaagccagaaaggtctactttgtggaaggcaacagattgggtgta
actcttctgaattccttacccaaaacttccatctaaaatggtttgaccgt
acccccaccccaaaatgccagccacgtaatacagagcatatcaaatacac
aacctaaatgtggacaaagaaagtatagcactccagtacaatccattgta
ccaaatcacgctttgggttaggacttattaaaaaactaatgataaccttg
ataggaaaggttagaaagcattgggaagtctctgggtcctctgtcctgtc
tggtttctctcttgtgtcttgttgtggttctattgctgtataaaatacca
ttactaaagcaattctgggaaggaaagaattaatttcagctacacgttct
atctatcactgagcaagtatggaggattcaagtcagaaaactggagtcaa
gcctgaaccgacgctatgagaacctgtactgatctccctgatactgtcag
ccacctctacacctcagacatctgct
gaattcatttcttaaataagaacctcatgaatatgttcaggtttcaagtt
aaaagcagtagaaataggtattttcatgtgttcatgtaaatcatcaaagt
gtaagtatgctccctgaagaaacacgttaactcacacactgagcttaaat
tataaccaggcttaattcattccaggttcattctcatcaaagaatcagcc
gaccaaaatgtcaaaataaacatttaactactaagtgaacaaattaaact
tctttatgatttaattgcaccagtgagtatttctttttggaatgtgtttc
tgctttgatacatttcaatacacatcatgaattatgttgaaggatggcat
ttcagcatgtgtgtgagtatgtatatacatatgtattttcaaactgcatt
gaaatgttatttaaaatatatatgcatgtgtacatatgatcattccaatt
tctatgtttatgtgtgtatattcaatacagaaaggcatattcccagaagc
cccatgcagcgtattcatattgtgggatgtatatttgccaactagtttca
ggaattagcagaaataagtctctgcctctgccttgctccattctaactac
acatgtgaatgcacaaatagttgataatgtttattcatcatgtgatatat
caatagtgaataagggtgtatattttgattatattgcatttttccaccac
tggaattcttatgaggtattttagagtttttttgtggttagaagctgcag
actcacagtgatcatcactgaaaagaaaacccgacaaaaccaaaactgaa
cagaacccacaccaaatctttcctattctttcgcattacagcacaacatt
ttccccgaatttatttcccatcaaattattttacagtgctaacttataat
gtaaggtcttaaggatgtctcaatggataagagtgcacactgttctttca
gaggccctgactttattctcatcattcaaagtgagcagattacattttcc
catataccaaatccagctattgatgcttttgtctcttgggaatatgcatg
tatgtgcaaccatcccatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45439052_45440202
seq2: B6Ng01-051K07.b_41_1166 (reverse)

seq1  AGCAGATGGTCCTGAGGTGTGTAAGAAGGTGGGCTGAGCACGGTATCAGG  50
      ||||||||   |||||||||   || |||| |||||   || ||||||| 
seq2  AGCAGATG--TCTGAGGTGT---AG-AGGT-GGCTG---ACAGTATCAG-  39

seq1  AGAAGATCAGTAAACAGTGTTCCTCCATAGCGTCTGGTTCAGGCTTTGAC  100
       | ||||||||  |||| ||||   ||||||||| ||||||||| |||||
seq2  -GGAGATCAGT--ACAG-GTTC--TCATAGCGTC-GGTTCAGGC-TTGAC  81

seq1  TCCAGTTTTCTGGCTTGAATTTCTTCCCTAACTTTGCTCAGTGATAGATA  150
      |||||||||||| ||||||  || ||| ||   |||||||||||||||||
seq2  TCCAGTTTTCTGACTTGAA--TCCTCCATA--CTTGCTCAGTGATAGATA  127

seq1  GGACCTGTAAGCTGAAATTAATTCTCTCC-TCCCAGAATTGCTTTAGTAA  199
      | || ||| |||||||||||||||| ||| ||||||||||||||||||||
seq2  GAACGTGT-AGCTGAAATTAATTCTTTCCTTCCCAGAATTGCTTTAGTAA  176

seq1  TGGTATTTTATTACAGCAATAGAAACCACAACAAGACACAAGAGAGAAAC  249
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  TGGTATTTTA-TACAGCAATAG-AACCACAACAAGACACAAGAGAGAAAC  224

seq1  CAGACAGGACAGAGGACCCAGAGACTTCCCAATGCTTTCTAAACCTTCCT  299
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  CAGACAGGACAGAGGACCCAGAGACTTCCCAATGCTTTCTAACCTTTCCT  274

seq1  ATCAAGGTTATCATTAGTTTTTTAATAAGTCCTAACCCAAAGCCTGATTT  349
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATCAAGGTTATCATTAGTTTTTTAATAAGTCCTAACCCAAAGCGTGATTT  324

seq1  GGTACAATGGATTGTACTGGAGTGCTATACTTTCTTTGTCCACATTTAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAATGGATTGTACTGGAGTGCTATACTTTCTTTGTCCACATTTAGG  374

seq1  TTGTGTATTTGATATGCTCTGTATTACGTGGCTGGCATTTTGGGGTGGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTTGATATGCTCTGTATTACGTGGCTGGCATTTTGGGGTGGGG  424

seq1  GTACGGTCAAACCATTTTAGATGGAAGTTTTGGGTAAGGAATTCAGAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGGTCAAACCATTTTAGATGGAAGTTTTGGGTAAGGAATTCAGAAGA  474

seq1  GTTACACCCAATCTGTTGCCTTCCACAAAGTAGACCTTTCTGGCTTCCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACCCAATCTGTTGCCTTCCACAAAGTAGACCTTTCTGGCTTCCTT  524

seq1  GTTGATAAAAAGTTGTCTGTATGTTTATCTACAAAGTGGGCACCAGGATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAAAAAGTTGTCTGTATGTTTATCTACAAAGTGGGCACCAGGATC  574

seq1  CTGACCATGTAGGTTACTTGACCTTCTGAATTCAAAATAGTTGATATGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATGTAGGTTACTTGACCTTCTGAATTCAAAATAGTTGATATGAC  624

seq1  ATGGGCAATAGTCTTATACATTTTGGGACTATAACTGGCTGGATCTCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAATAGTCTTATACATTTTGGGACTATAACTGGCTGGATCTCTTG  674

seq1  TTTTTAATGTGCTGCTGTTTGTGCATCTGACTTTTAACATGGGTTGCTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATGTGCTGCTGTTTGTGCATCTGACTTTTAACATGGGTTGCTGA  724

seq1  ATTTGAAACTACTTAATAAAAAACTGCAAGGGAAATAAACAAAAATGTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAACTACTTAATAAAAAACTGCAAGGGAAATAAACAAAAATGTTT  774

seq1  TACAACACAGTGGCTCAGGGTTCCTTTAATAGGATATTCTTCTGCACCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACACAGTGGCTCAGGGTTCCTTTAATAGGATATTCTTCTGCACCCA  824

seq1  GTGCAAAACCTTGTAAAAATTCAATAAATAATTGTTGGCTGAATTAATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAACCTTGTAAAAATTCAATAAATAATTGTTGGCTGAATTAATAA  874

seq1  ATGCATGATGCTCTTGGAACACTTTGTTAATGGTATAGAATTATATATAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGATGCTCTTGGAACACTTTGTTAATGGTATAGAATTATATATAG  924

seq1  TTAGAATTGGTAGTTATATTTAAATAATTCATGTGGATATTTCCTTAAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTGGTAGTTATATTTAAATAATTCATGTGGATATTTCCTTAAAT  974

seq1  GGTATGATAAAAATGAGAGCTGTTGAAACAGCAGAGTAGATTTATTATCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGATAAAAATGAGAGCTGTTGAAACAGCAGAGTAGATTTATTATCT  1024

seq1  TTTAAACTCTTTCTTTTCCCAACAAGTAAATCTCATGTTGCAAATATTAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCTTTCTTTTCCCAACAAGTAAATCTCATGTTGCAAATATTAA  1074

seq1  CTATGAAAGCATCATATAATATCTACCTGGTATCATAACCTCCTTAGAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAAGCATCATATAATATCTACCTGGTATCATAACCTCCTTAGAAT  1124

seq1  TC  1151
      ||
seq2  TC  1126

seq1: chr2_45306739_45307817
seq2: B6Ng01-051K07.g_64_1134

seq1  GAATTCATTTCTTAAATAAGAACCTCATGAATATGTTCAGGTTTCAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTTAAATAAGAACCTCATGAATATGTTCAGGTTTCAAGTT  50

seq1  AAAAGCAGTAGAAATAGGTATTTTCATGTGTTCATGTAAATCATCAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGTAGAAATAGGTATTTTCATGTGTTCATGTAAATCATCAAAGT  100

seq1  GTAAGTATGCTCCCTGAAGAAACACGTTAACTCACACACTGAGCTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATGCTCCCTGAAGAAACACGTTAACTCACACACTGAGCTTAAAT  150

seq1  TATAACCAGGCTTAATTCATTCCAGGTTCATTCTCATCAAAGAATCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCAGGCTTAATTCATTCCAGGTTCATTCTCATCAAAGAATCAGCC  200

seq1  GACCAAAATGTCAAAATAAACATTTAACTACTAAGTGAACAAATTAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAATGTCAAAATAAACATTTAACTACTAAGTGAACAAATTAAACT  250

seq1  TCTTTATGATTTAATTGCACCAGTGAGTATTTCTTTTTGGAATGTGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATGATTTAATTGCACCAGTGAGTATTTCTTTTTGGAATGTGTTTC  300

seq1  TGCTTTGATACATTTCAATACACATCATGAATTATGTTGAAGGATGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGATACATTTCAATACACATCATGAATTATGTTGAAGGATGGCAT  350

seq1  TTCAGCATGTGTGTGAGTATGTATATACATATGTATTTTCAAACTGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATGTGTGTGAGTATGTATATACATATGTATTTTCAAACTGCATT  400

seq1  GAAATGTTATTTAAAATATATATGCATGTGTACATATGATCATTCCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTATTTAAAATATATATGCATGTGTACATATGATCATTCCAATT  450

seq1  TCTATGTTTATGTGTGTATATTCAATACAGAAAGGCATATTCCCAGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTTATGTGTGTATATTCAATACAGAAAGGCATATTCCCAGAAGC  500

seq1  CCCATGCAGCGTATTCATATTGTGGGATGTATATTTGCCAACTAGTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCAGCGTATTCATATTGTGGGATGTATATTTGCCAACTAGTTTCA  550

seq1  GGAATTAGCAGAAATAAGTCTCTGCCTCTGCCTTGCTCCATTCTAACTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAGCAGAAATAAGTCTCTGCCTCTGCCTTGCTCCATTCTAACTAC  600

seq1  ACATGTGAATGCACAAATAGTTGATAATGTTTATTCATCATGTGATATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAATGCACAAATAGTTGATAATGTTTATTCATCATGTGATATAT  650

seq1  CAATAGTGAATAAGGGTGTATATTTTGATTATATTGCATTTTTCCACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTGAATAAGGGTGTATATTTTGATTATATTGCATTTTTCCACCAC  700

seq1  TGGAATTCTTATGAGGTATTTTAGAGTTTTTTTGTGGTTAGAAGCTGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTTATGAGGTATTTTAGAGTTTTTTTGTGGTTAGAAGCTGCAG  750

seq1  ACTCACAGTGATCATCACTGAAAAGAAAACCCGACAAAACCAAAACTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGTGATCATCACTGAAAAGAAAACCCGACAAAACCAAAACTGAA  800

seq1  CAGAACCCACACCAAATCTTTCCTATTCTTTCGCATTACAGCACAACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCCACACCAAATCTTTCCTATTCTTTCGCATTACAGCACAACATT  850

seq1  TTCCCCGAATTTATTTCCCATCAAATTATTTTACAGTGCTAACTTATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGAATTTATTTCCCATCAAATTATTTTACAGTGCTAACTTATAAT  900

seq1  GTAAGGTCTTAAGGGATGTCTCAATGGATAAGAGTGCACACTGTTCTTTC  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTCTTAA-GGATGTCTCAATGGATAAGAGTGCACACTGTTCTTTC  949

seq1  AGAGGCCCTGACTTTTATTCTCATCATTCAAAGTGAGCAGATTACATTTT  1000
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCCTGAC-TTTATTCTCATCATTCAAAGTGAGCAGATTACATTTT  998

seq1  CCCATAATACCAAATCCAGGCTATTGGATGCCTCTTGTCTCCTTGGGAAT  1050
      ||||| |||||||||||| |||||| |||| || |||||| |||||||||
seq2  CCCAT-ATACCAAATCCA-GCTATT-GATG-CTTTTGTCT-CTTGGGAAT  1043

seq1  ATGCATGTATGTGCACACATCCCAATGCC  1079
      |||||||||||||||  |||||| |||||
seq2  ATGCATGTATGTGCAACCATCCC-ATGCC  1071