BAC Information

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BAC

Clone NameB6Ng01-052G10
Chromosome2 (Build37)
Map Location 116,834,365 - 117,004,031
singlet/doubletdoublet
Overlap geneLOC241621, Spred1
Upstream geneMrg1, G630016G05Rik, 2810405F15Rik, LOC433464, Tmco5, LOC100043557
Downstream geneLOC624574, 2610510H03Rik, Rasgrp1, Thbs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052G10.bB6Ng01-052G10.g
ACCDH875767DH875768
length1,1681,153
definitionDH875767|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G10, 5' end.DH875768|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,002,846 - 117,004,031)(116,834,365 - 116,835,513)
sequence
gaattcaaatctttaaaaagtcccatcacctagtgcataaatatgaaaat
gccaaaattaatcccttttagttggatcctattctatgttgaccttttgt
aatcaataaccagaaatgactgccttctgaaaatgctctgtgatctgtcc
cagaacatgccatgcactcagggaaacaggcacggctagcatctgtaaat
cacaagaactgatgagttctgcttcctccacgcatggccccaatgatacc
ggcaagattccatattgcttgccaacagcttccacaaatccaagttagct
aattcctggagatgaaggtttaagctcatgccggccctggactgcttcac
ccagcagccttatgtttcccaccacagcacccgcatgcctcaccacagcg
atggcacattctcaaagggacgtagcagcacatacatggtacaatgaaag
acagagctaccagggctaaccaccttaggcagaacttgtcatcgctagtg
tcacacgaacaaggatcagaaaagtctccctctgagtctgacatacaatg
atatagcatgctctcagcacagagcatgcagctaacttgatatatgcatc
ttttaacaggatctggagcgtcctggcatttccccctggcgttttcttca
tgattaaacctttcctggcagtatacgcagcgagaacgttccccatcctc
ttttcttcgttttgacttaaattttaacgagggaggctgtgtcttaaata
ccacagagtctttcagagaacttaacttagtctcatccccacagtggtag
agatagtctgactttttactgtcttgtttagaaaatggaacactggagtc
agtatcatctctctccaagtcatttttccacatgtccggatgtctgtagt
ctgcatatcgacgtattagatatctcgaggatttattctaacaatctcat
cctcatcttgaaagctgacatgtctgattgacttcaaagggacctagaca
gataaaaattgcagtagacgatggtggtgatttatgtcagtgtggtagat
gaccccacctagggattcattccaggagctcttgaccaaggtttactgga
gatcaacacttcgctgctgaccagcatccagacaaaccctgaacaagact
acctccctgtaccaagag
gaattccattcagggcacattactattatcctcctttccaaaggaagaag
cagaatttaatacatgagctcaatcaccaaggcccatcttctgaaaggta
cccactccacgggtttacctggcacagaataaaattgcccaagaagacag
gagagagagagagagagagagagagagagagagagagagagagagagaga
gagagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagggatttggcattttgaaaaatatgt
atctattttattttatgcatatgagtgttttgcctacacttacatctgtg
taccatgtgcatgcagtgccaatggggatcagaataaggaaatagattcc
cctggacttggagtcaaagacagttgtgaaccaccaagtgggtactgaga
actgaacttgagtcctctggaagagtttcaagtcttcttaactactgagc
catctctccagcactcctaccccacccagttctcagaacttcatgttagc
agttctttctctgaattcaacagaccaacaacttggaggctaatttcttt
ttctttttttttaagatttatttatttttatttattaagtacaccattgc
tgtgttcagatacaccagaagaaagcatcagatctcattacagatggttg
tgagccaccatatggttgctgggaattgaactcaggacctctggaagagc
agtcagtgctcttaactgctgagctatctctccagcccagagctgatttc
ttcatgaaaatttcaccctttctacagaacaggaaagcagtagtatagaa
aatagatgctggtcactgatgcctcaaatttgtctccttggttattcaag
agcactgttaataggtcattcccaacaaggaggactatgatatttacttt
catcatggaggaagtgaggaaagctgcccttctgtaagacctctaagtca
tttataggtcatttaaagaaagattccactgggaataggataacaggtaa
agttaattacccaggattcccactctccttggccggggagttgggcattc
aaatacggtattctctaaggccttcaatacaaggcctgtgcctttcaccc
tag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117002846_117004031
seq2: B6Ng01-052G10.b_44_1211 (reverse)

seq1  CTCTTGCTCTACAGGGAGGTAGTCTTTGTTTCAGGTGTTGTCTGATTGGC  50
      ||||||   |||||||||||||||||   ||||||  |||||||  ||  
seq2  CTCTTG--GTACAGGGAGGTAGTCTT--GTTCAGGGTTTGTCTGGATG--  44

seq1  TGTGGTCCAGCAGCCGAAGTGTTGATCTCAGTTAAAACTTGGTCACAGAG  100
        |||| |||||| |||||||||||||||   |||| |||||||| ||||
seq2  -CTGGT-CAGCAG-CGAAGTGTTGATCTCCAGTAAACCTTGGTCA-AGAG  90

seq1  CTCCTTGAATGAATCCCTAGGTGGGGGTCATCCTACCACACTGACATAAA  150
      ||||| |||||||||||||||| |||||||| ||||||||||||||| ||
seq2  CTCCTGGAATGAATCCCTAGGT-GGGGTCAT-CTACCACACTGACAT-AA  137

seq1  ATCAACCACCATCGTCCTTACTGCAATTTTTATCTTGTCTAGGTCCCTTT  200
      ||| ||||||||||||  |||||||||||||||| |||||||||||||||
seq2  ATC-ACCACCATCGTC--TACTGCAATTTTTATC-TGTCTAGGTCCCTTT  183

seq1  GAAGTCAATCAGACATGTCAGCTTTCAAGATGAGGATGAGATTGTTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAATCAGACATGTCAGCTTTCAAGATGAGGATGAGATTGTTAGAA  233

seq1  TAAATCCTCGAGATATCTTAATACGTCGATATGCAGACTACAGACATCCG  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAATCCTCGAGATATC-TAATACGTCGATATGCAGACTACAGACATCCG  282

seq1  GACATGTGGAAAAATGACTTGGAGAGAGATGATACTGACTCCAGTGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTGGAAAAATGACTTGGAGAGAGATGATACTGACTCCAGTGTTCC  332

seq1  ATTTTCTAAACAAGACAGTAAAAAGTCAGACTATCTCTACCACTGTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAAACAAGACAGTAAAAAGTCAGACTATCTCTACCACTGTGGGG  382

seq1  ATGAGACTAAGTTAAGTTCTCTGAAAGACTCTGTGGTATTTAAGACACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACTAAGTTAAGTTCTCTGAAAGACTCTGTGGTATTTAAGACACAG  432

seq1  CCTCCCTCGTTAAAATTTAAGTCAAAACGAAGAAAAGAGGATGGGGAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCGTTAAAATTTAAGTCAAAACGAAGAAAAGAGGATGGGGAACG  482

seq1  TTCTCGCTGCGTATACTGCCAGGAAAGGTTTAATCATGAAGAAAACGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGCTGCGTATACTGCCAGGAAAGGTTTAATCATGAAGAAAACGCCA  532

seq1  GGGGGAAATGCCAGGACGCTCCAGATCCTGTTAAAAGATGCATATATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAATGCCAGGACGCTCCAGATCCTGTTAAAAGATGCATATATCAA  582

seq1  GTTAGCTGCATGCTCTGTGCTGAGAGCATGCTATATCATTGTATGTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTGCATGCTCTGTGCTGAGAGCATGCTATATCATTGTATGTCAGA  632

seq1  CTCAGAGGGAGACTTTTCTGATCCTTGTTCGTGTGACACTAGCGATGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGGAGACTTTTCTGATCCTTGTTCGTGTGACACTAGCGATGACA  682

seq1  AGTTCTGCCTAAGGTGGTTAGCCCTGGTAGCTCTGTCTTTCATTGTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGCCTAAGGTGGTTAGCCCTGGTAGCTCTGTCTTTCATTGTACCA  732

seq1  TGTATGTGCTGCTACGTCCCTTTGAGAATGTGCCATCGCTGTGGTGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGCTGCTACGTCCCTTTGAGAATGTGCCATCGCTGTGGTGAGGC  782

seq1  ATGCGGGTGCTGTGGTGGGAAACATAAGGCTGCTGGGTGAAGCAGTCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGGTGCTGTGGTGGGAAACATAAGGCTGCTGGGTGAAGCAGTCCAG  832

seq1  GGCCGGCATGAGCTTAAACCTTCATCTCCAGGAATTAGCTAACTTGGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGCATGAGCTTAAACCTTCATCTCCAGGAATTAGCTAACTTGGATT  882

seq1  TGTGGAAGCTGTTGGCAAGCAATATGGAATCTTGCCGGTATCATTGGGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGCTGTTGGCAAGCAATATGGAATCTTGCCGGTATCATTGGGGC  932

seq1  CATGCGTGGAGGAAGCAGAACTCATCAGTTCTTGTGATTTACAGATGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTGGAGGAAGCAGAACTCATCAGTTCTTGTGATTTACAGATGCTA  982

seq1  GCCGTGCCTGTTTCCCTGAGTGCATGGCATGTTCTGGGACAGATCACAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGCCTGTTTCCCTGAGTGCATGGCATGTTCTGGGACAGATCACAGA  1032

seq1  GCATTTTCAGAAGGCAGTCATTTCTGGTTATTGATTACAAAAGGTCAACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCAGAAGGCAGTCATTTCTGGTTATTGATTACAAAAGGTCAACA  1082

seq1  TAGAATAGGATCCAACTAAAAGGGATTAATTTTGGCATTTTCATATTTAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGGATCCAACTAAAAGGGATTAATTTTGGCATTTTCATATTTAT  1132

seq1  GCACTAGGTGATGGGACTTTTTAAAGATTTGAATTC  1186
      ||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGTGATGGGACTTTTTAAAGATTTGAATTC  1168

seq1: chr2_116834365_116835513
seq2: B6Ng01-052G10.g_66_1218

seq1  GAATTCCATTCAGGGCACATTACTATTATCCTCCTTTCCAAAGGAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCAGGGCACATTACTATTATCCTCCTTTCCAAAGGAAGAAG  50

seq1  CAGAATTTAATACATGAGCTCAATCACCAAGGCCCATCTTCTGAAAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTAATACATGAGCTCAATCACCAAGGCCCATCTTCTGAAAGGTA  100

seq1  CCCACTCCACGGGTTTACCTGGCACAGAATAAAATTGCCCAAGAAGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCACGGGTTTACCTGGCACAGAATAAAATTGCCCAAGAAGACAG  150

seq1  ----GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  196
          ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200

seq1  GAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  250

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGGGATTTGGCATTTTGAAAAATATGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGGGATTTGGCATTTTGAAAAATATGT  300

seq1  ATCTATTTTATTTTATGCATATGAGTGTTTTGCCTACACTTACATCTGTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTATTTTATGCATATGAGTGTTTTGCCTACACTTACATCTGTG  350

seq1  TACCATGTGCATGCAGTGCCAATGGGGATCAGAATAAGGAAATAGATTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGTGCATGCAGTGCCAATGGGGATCAGAATAAGGAAATAGATTCC  400

seq1  CCTGGACTTGGAGTCAAAGACAGTTGTGAACCACCAAGTGGGTACTGAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACTTGGAGTCAAAGACAGTTGTGAACCACCAAGTGGGTACTGAGA  450

seq1  ACTGAACTTGAGTCCTCTGGAAGAGTTTCAAGTCTTCTTAACTACTGAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTTGAGTCCTCTGGAAGAGTTTCAAGTCTTCTTAACTACTGAGC  500

seq1  CATCTCTCCAGCACTCCTACCCCACCCAGTTCTCAGAACTTCATGTTAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCCAGCACTCCTACCCCACCCAGTTCTCAGAACTTCATGTTAGC  550

seq1  AGTTCTTTCTCTGAATTCAACAGACCAACAACTTGGAGGCTAATTTCTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCTCTGAATTCAACAGACCAACAACTTGGAGGCTAATTTCTTT  600

seq1  TTCTTTTTTTTTAAGATTTATTTATTTTTATTTATTAAGTACACCATTGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTAAGATTTATTTATTTTTATTTATTAAGTACACCATTGC  650

seq1  TGTGTTCAGATACACCAGAAGAAAGCATCAGATCTCATTACAGATGGTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCAGATACACCAGAAGAAAGCATCAGATCTCATTACAGATGGTTG  700

seq1  TGAGCCACCATATGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATATGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGC  750

seq1  AGTCAGTGCTCTTAACTGCTGAGCTATCTCTCCAGCCCAGAGGCTGATTT  796
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTCAGTGCTCTTAACTGCTGAGCTATCTCTCCAGCCCAGA-GCTGATTT  799

seq1  CTTCATGAAAATTTCACCCTTTCTACAGAACAGGGAAAGCAGTAGTATAG  846
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTCATGAAAATTTCACCCTTTCTACAGAACA-GGAAAGCAGTAGTATAG  848

seq1  AAAATAGATGCTGGTCACTGATGCCTCAAATTTGTCTCCTTGGTTATTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGATGCTGGTCACTGATGCCTCAAATTTGTCTCCTTGGTTATTCA  898

seq1  AGAGCACTGTTAATAGGTCATTCCCAACAAGGAGGGACTATGAATATTTA  946
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  AGAGCACTGTTAATAGGTCATTCCCAACAAGGA-GGACTATG-ATATTTA  946

seq1  CTTTCATCATGGAGGAAGTAGAGGAAAAGCTGCCCTTCTGTTAGA-CTCT  995
      ||||||||||||||||||| |||| |||||||||||||||| ||| ||||
seq2  CTTTCATCATGGAGGAAGT-GAGG-AAAGCTGCCCTTCTGTAAGACCTCT  994

seq1  AGGTCATTTATAGGTCATTTATAG-AAGATTTCACTGGGAAATAGATAAC  1044
      | ||||||||||||||||||| || |||||| |||||||||   ||||||
seq2  AAGTCATTTATAGGTCATTTAAAGAAAGATTCCACTGGGAATAGGATAAC  1044

seq1  AGGTAAAAGTAAATACCCAGCATTCCAA--CTCCTTGG-CGGGGATTTGG  1091
      |||||||  ||| ||||||| ||||| |  |||||||| |||||| ||||
seq2  AGGTAAAGTTAATTACCCAGGATTCCCACTCTCCTTGGCCGGGGAGTTGG  1094

seq1  GCATTCAATTACGTTATTCT-TAAAGCTTCATAAATACAAGG-CTGTG-C  1138
      |||||||| |||| |||||| ||| ||  | | ||||||||| ||||| |
seq2  GCATTCAAATACGGTATTCTCTAAGGC--CTTCAATACAAGGCCTGTGCC  1142

seq1  TTTCACTCTAG  1149
      |||||| ||||
seq2  TTTCACCCTAG  1153