BAC Information

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BAC

Clone NameB6Ng01-052O03
Chromosome2 (Build37)
Map Location 107,267,669 - 107,393,943
singlet/doubletdoublet
Overlap genenone
Upstream gene9330126M15, C130023O10Rik, LOC677260, 2700007P21Rik, LOC383739, Fshb, Kcna4
Downstream geneLOC100043078
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052O03.bB6Ng01-052O03.g
ACCDH876102DH876103
length1,094292
definitionDH876102|Mus musculus domesticus DNA, BAC clone: B6Ng01-052O03, 5' end.DH876103|Mus musculus domesticus DNA, BAC clone: B6Ng01-052O03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,267,669 - 107,268,361)(107,393,652 - 107,393,943)
sequence
gaattctcctggaggagaaaagtgatcatcaatagcacccagctacaagc
cctgtgacctacaacagtgacctgccttcaagttctattaatctaatagt
aacaaatattatggaagtagacaaccactctttgattgagtttagggagt
actctattagatggaatgcatagctatcagagctaaggtggcctagaacc
tggtactgcatacaaaataagcttttggaaaaaccttaatactgttagtc
tgctaaaacaacaaacatgcaagcaagcaagacagcaaacaagcaaacac
acacacacacacacacacacacacacacacacacctaaacaaacaggaat
aaaatgattcctaatgaaatttttctgtgaccatagagtgacactcaacc
ttcatcgggcaagcttcttatagtagatagtaattaatacattgaccagc
aagtggacaatggtcaaggaaggagatgctttggaacactcagtcctaaa
ttagatgtctttatcagacccctccccttgaggctgaaggatctatatga
aaaaaaggggaaagattggtaagaacaagaggtgatggttccaaggaaat
aatgtcttctggaggcaataggattgatacacatatgaacttactgagac
cttgacagcatgtagacttgtacaagttcaaaccagagaaatcagcagca
agaggaaggggaagcagacaatcaaccccttctataaaaaaaaaagtatc
aatttacaattgatacctgctggacaaaagaaaaccagttttacctaacg
gagtgccactgtactggtgtgtcaaccacactaaagacatgccccatatc
taagagtatttgttcaacacaaaatggattccatgattttgggagctctt
tttgttatttacaactaatccatgaccttttaaataaatctgtatattaa
ttgatatagtgccatatagattcaggaaaactgcccagactttactagat
atagtattctccacacattctttttttaaattttttattaggtatttctt
catacaatttccatgctatcccaaactccccataccgtcccccc
caaaatattcctacactaaaataaaatgttatggctcacatttctccaag
cataagcataaacacaaatttgaaacatttagttgagatgaggaaaaact
atcagtttgcctgtagttctaaatcacactttgaggtcaagaaagtagca
ttaattgagaatatatattttaatttgagcagagaagtatatatcaatct
tagtaacccaaaatcattaagtaaatatatatatatatatatatgtatat
atatatatatatatatatgtagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_107267669_107268361
seq2: B6Ng01-052O03.b_450_1137

seq1  GGGCAAGCTTCTTATAGTAGATAGTAATTAATACATTGACCAGCAAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGCTTCTTATAGTAGATAGTAATTAATACATTGACCAGCAAGTGG  50

seq1  ACAATGGTCAAGGAAGGAGATGCTTTGGAACACTCAGTCCTAAATTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGTCAAGGAAGGAGATGCTTTGGAACACTCAGTCCTAAATTAGAT  100

seq1  GTCTTTATCAGACCCCTCCCCTTGAGGCTGAAGGATCTATATGAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTATCAGACCCCTCCCCTTGAGGCTGAAGGATCTATATGAAAAAAA  150

seq1  GGGGAAAGATTGGTAAGAACAAGAGGTGATGGTTCCAAGGAAATAATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGATTGGTAAGAACAAGAGGTGATGGTTCCAAGGAAATAATGTC  200

seq1  TTCTGGAGGCAATAGGATTGATACACATATGAACTTACTGAGACCTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGGCAATAGGATTGATACACATATGAACTTACTGAGACCTTGAC  250

seq1  AGCATGTAGACTTGTACAAGTTCAAACCAGAGAAATCAGCAGCAAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTAGACTTGTACAAGTTCAAACCAGAGAAATCAGCAGCAAGAGGA  300

seq1  AGGGGAAGCAGACAATCAACCCCTTCTATAAAAAAAAAAGTATCAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGCAGACAATCAACCCCTTCTATAAAAAAAAAAGTATCAATTTA  350

seq1  CAATTGATACCTGCTGGACAAAAGAAAACCAGTTTTACCTAACGGAGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATACCTGCTGGACAAAAGAAAACCAGTTTTACCTAACGGAGTGC  400

seq1  CACTGTACTGGTGTGTCAACCACACT-AAGACATGCCCCATATCTAAGAG  449
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CACTGTACTGGTGTGTCAACCACACTAAAGACATGCCCCATATCTAAGAG  450

seq1  TATTTGTTCAACACAAAATGGATTCCATGA-TTTGGGAGCTC-TTTTGTT  497
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  TATTTGTTCAACACAAAATGGATTCCATGATTTTGGGAGCTCTTTTTGTT  500

seq1  ATTTACAACTAATCCATGACCTTTTAAATAAATCTGTATAATTAATTGAA  547
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  ATTTACAACTAATCCATGACCTTTTAAATAAATCTGTAT-ATTAATTG-A  548

seq1  TATAGTGCCATATAGATTCAGGAAAACTGCCCAGACTTTACTAGATATAA  597
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGTGCCATATAGATTCAGGAAAACTGCCCAGACTTTACTAGATAT-A  597

seq1  GTATTCT-CACACATTCTTTTTTTTAAATTTTTTATTAGGTATTTTCTTC  646
      ||||||| ||||||||| |||||||||||||||||||||||| |||||||
seq2  GTATTCTCCACACATTC-TTTTTTTAAATTTTTTATTAGGTA-TTTCTTC  645

seq1  ATTTACATTTCCAATGCTATCCCAAAACTCCCCCATACCGTCCCCCC  693
      |  |||| || | |||||||||| ||||| |||||||||||||||||
seq2  A--TACAATTTCCATGCTATCCC-AAACT-CCCCATACCGTCCCCCC  688

seq1: chr2_107393652_107393943
seq2: B6Ng01-052O03.g_72_363 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTACATATATATATATATATATATATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTACATATATATATATATATATATATACAT  50

seq1  ATATATATATATATATATTTACTTAATGATTTTGGGTTACTAAGATTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATTTACTTAATGATTTTGGGTTACTAAGATTGAT  100

seq1  ATATACTTCTCTGCTCAAATTAAAATATATATTCTCAATTAATGCTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTCTCTGCTCAAATTAAAATATATATTCTCAATTAATGCTACTT  150

seq1  TCTTGACCTCAAAGTGTGATTTAGAACTACAGGCAAACTGATAGTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACCTCAAAGTGTGATTTAGAACTACAGGCAAACTGATAGTTTTTC  200

seq1  CTCATCTCAACTAAATGTTTCAAATTTGTGTTTATGCTTATGCTTGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTCAACTAAATGTTTCAAATTTGTGTTTATGCTTATGCTTGGAGA  250

seq1  AATGTGAGCCATAACATTTTATTTTAGTGTAGGAATATTTTG  292
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGCCATAACATTTTATTTTAGTGTAGGAATATTTTG  292