BAC Information

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BAC

Clone NameB6Ng01-053A23
Chromosome2 (Build37)
Map Location 58,670,885 - 58,818,381
singlet/doubletdoublet
Overlap geneBC062650
Upstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1, LOC674940, Upp2
Downstream genePkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053A23.bB6Ng01-053A23.g
ACCDH876221DH876222
length1111,009
definitionDH876221|Mus musculus domesticus DNA, BAC clone: B6Ng01-053A23, 5' end.DH876222|Mus musculus domesticus DNA, BAC clone: B6Ng01-053A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,818,271 - 58,818,381)(58,670,885 - 58,671,896)
sequence
gaattcaaagtcccaaaccttgtgcatcttacctcctgggagtttgagtg
acatacaagatgaatgagcagtatctgtgcataaaagagatgagcgctaa
gagcaaagcgg
gaattctttggtgacctagctaagaacagtaccagaacagcacaagactg
gatcggagtggctggatctgagtgtgaaacagtaatggggagactagaga
ggcatccagtgtctacaggcagctctttgaaggtgttccttgagtggcaa
gaagtagctgaggagtagttagaggacaacatgaggttgacagagattca
tccaaatgctgggatctattccaacatatttgtaaactcaaggaaggatt
aaagatataagaaataaaatgagcagcaacagaattcatgtagcattggg
taggaagaaaactcaaaactcaacatgagtgcagtaccctcctcaagaga
aagtaaaagggagcccacgctggatttaggaggaagtaagggccttccta
caagacagataatatagtcttcttccaaatggaggcagcccatcaccctc
aaagattgagagatgaatctgaggataccatcactaacaatgggatcaaa
ggtagtggggcttttccctcctttttctttccttccatcttccctttctt
tccttcttctttccttccttctttctttctttgagacttatgtaagttgt
atatgtgtgtgtatgcatttgagtatagatgactacagaggctagaagag
aatgtcatcagaacatctggagctgatgttacaggtagttatgagcttcc
tgatatgggtggaagaaaccaaactggggtcctctgctgctacacacact
ccagtgaagtttgcttggcaggccgagaggcctggaagcactcacaaggc
taagagtttcacagaaactcacctcctggagctttggcgctctcattaac
ccgtatactcataccctatccccgcattaatctggtgtatggatccacat
gctctcttttagtataattttattataagtgtctttaagattgaattctg
acatagccagagccttcccagtgttccaatgtcctgaaattgcttgaagc
caacaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_58818271_58818381
seq2: B6Ng01-053A23.b_41_151 (reverse)

seq1  CCGCTTTGCTCTTAGCGCTCATCTCTTTTATGCACAGATACTGCTCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTTTGCTCTTAGCGCTCATCTCTTTTATGCACAGATACTGCTCATTC  50

seq1  ATCTTGTATGTCACTCAAACTCCCAGGAGGTAAGATGCACAAGGTTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTATGTCACTCAAACTCCCAGGAGGTAAGATGCACAAGGTTTGGG  100

seq1  ACTTTGAATTC  111
      |||||||||||
seq2  ACTTTGAATTC  111

seq1: chr2_58670885_58671896
seq2: B6Ng01-053A23.g_69_1077

seq1  GAATTCTTTGGTGACCTAGCTAAGAACAGTACCAGAACAGCACAAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTGACCTAGCTAAGAACAGTACCAGAACAGCACAAGACTG  50

seq1  GATCGGAGTGGCTGGATCTGAGTGTGAAACAGTAATGGGGAGACTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGAGTGGCTGGATCTGAGTGTGAAACAGTAATGGGGAGACTAGAGA  100

seq1  GGCATCCAGTGTCTACAGGCAGCTCTTTGAAGGTGTTCCTTGAGTGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCAGTGTCTACAGGCAGCTCTTTGAAGGTGTTCCTTGAGTGGCAA  150

seq1  GAAGTAGCTGAGGAGTAGTTAGAGGACAACATGAGGTTGACAGAGATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGCTGAGGAGTAGTTAGAGGACAACATGAGGTTGACAGAGATTCA  200

seq1  TCCAAATGCTGGGATCTATTCCAACATATTTGTAAACTCAAGGAAGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGCTGGGATCTATTCCAACATATTTGTAAACTCAAGGAAGGATT  250

seq1  AAAGATATAAGAAATAAAATGAGCAGCAACAGAATTCATGTAGCATTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATAAGAAATAAAATGAGCAGCAACAGAATTCATGTAGCATTGGG  300

seq1  TAGGAAGAAAACTCAAAACTCAACATGAGTGCAGTACCCTCCTCAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGAAAACTCAAAACTCAACATGAGTGCAGTACCCTCCTCAAGAGA  350

seq1  AAGTAAAAGGGAGCCCACGCTGGATTTAGGAGGAAGTAAGGGCCTTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGGGAGCCCACGCTGGATTTAGGAGGAAGTAAGGGCCTTCCTA  400

seq1  CAAGACAGATAATATAGTCTTCTTCCAAATGGAGGCAGCCCATCACCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGATAATATAGTCTTCTTCCAAATGGAGGCAGCCCATCACCCTC  450

seq1  AAAGATTGAGAGATGAATCTGAGGATACCATCACTAACAATGGGATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGAGAGATGAATCTGAGGATACCATCACTAACAATGGGATCAAA  500

seq1  GGTAGTGGGGCTTTTCCCTCCTTTTTCTTTCCTTCCATCTTCCCTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGGGGCTTTTCCCTCCTTTTTCTTTCCTTCCATCTTCCCTTTCTT  550

seq1  TCCTTCTTCTTTCCTTCCTTCTTTCTTTCTTTGAGACTTATGTAAGTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTCTTTCCTTCCTTCTTTCTTTCTTTGAGACTTATGTAAGTTGT  600

seq1  ATATGTGTGTGTATGCATTTGAGTATAGATGACTACAGAGGCTAGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTGTGTATGCATTTGAGTATAGATGACTACAGAGGCTAGAAGAG  650

seq1  AATGTCATCAGAACATCTGGAGCTGATGTTACAGGTAGTTATGAGCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATCAGAACATCTGGAGCTGATGTTACAGGTAGTTATGAGCTTCC  700

seq1  TGATATGGGTGGAAGAAACCAAACTGGGGTCCTCTGCTGCTACACACACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGGGTGGAAGAAACCAAACTGGGGTCCTCTGCTGCTACACACACT  750

seq1  CCAGTGAAGTTTGCTTGGCAGGCCGAGAGGCCTGGAAGCACTCACAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAAGTTTGCTTGGCAGGCCGAGAGGCCTGGAAGCACTCACAAGGC  800

seq1  TAAGAGTTTCACAGAAACTCACCTCCTGGAGCTTTGGCGCTCTCATTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTTCACAGAAACTCACCTCCTGGAGCTTTGGCGCTCTCATTAAC  850

seq1  CCGTATACTCATACCCTATCCCCGCATTAATCTGGTGTATGGATCCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATACTCATACCCTATCCCCGCATTAATCTGGTGTATGGATCCACAT  900

seq1  GCTCTCTTTTAGTATTATTTTATTATAAGTGTCTTTTAAGATTGAATTCT  950
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  GCTCTCTTTTAGTATAATTTTATTATAAGTGTC-TTTAAGATTGAATTCT  949

seq1  GACATAGCCAGAGCCTTCGCCAGTGTTCCAATGTCCTAGAAAATGCTTGA  1000
      |||||||||||||||||| |||||||||||||||||| |||| |||||||
seq2  GACATAGCCAGAGCCTTC-CCAGTGTTCCAATGTCCT-GAAATTGCTTGA  997

seq1  AGCCAACAAGCT  1012
      ||||||||||||
seq2  AGCCAACAAGCT  1009