BAC Information

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BAC

Clone NameB6Ng01-053E13
Chromosome2 (Build37)8 (Build37)
Map Location 142,776,633 - 142,777,16194,504,336 - 94,505,026
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053E13.bB6Ng01-053E13.g
ACCDH876376DH876377
length606704
definitionDH876376|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E13, 5' end.DH876377|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,633 - 142,777,161)(94,504,336 - 94,505,026)
sequence
gaattcttttgttcagttctgagccccattttttaatggggttatgtgat
tttctgaagtccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgaaggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggatcgattcg
cattcttctacatgataacaaccagttgtgccagcaccaaatgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccataccatgcagtttttatcacaattgc
tctgta
gaattcagaactatggacattctcaggcatcagagctgtgcaggcagaaa
aaagtatcaagtacatttgcagagatcgaaatgtattatggttacaaaat
cagaatgaggtaccagagctttaaaacttagtctaaactaaacaagaaag
agctgtgtaagttcagagcagagttgcagacatgacaaatgcaccataaa
gattgttaggtgtgtacatttacacaatggagtactactcagctattaaa
aagaatgaatttatgaaattcctaggcaaatggatggacctggagggcat
catcttgagtgaggtaacccaatcacaaaagaactcacacaatatgtact
cactgataagtggatattagcccagaaacttagaatacccaagatataag
atacaatttgcaaaactcatgaaactcaagaagaacgaagattaaagtgt
ggacactttgccccttcttagaattgggaacaaaacacccatggaaggag
ttacagagacaaagtttggagctgatacgaaaggatggaccatctataga
ctgccatatccggggatccatcccataatcagcttctaaacgctgacacc
attgcatacactatcaagattttgctgaaagaccccagagatagctgtct
cttgtgaggctatgttggggcctagaaacacagaagtggatgctctcagt
catc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776633_142777161
seq2: B6Ng01-053E13.b_111_638 (reverse)

seq1  TACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACA  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TACAGAGCAATTGTGATAAAAACTGCATGGTA-TGGTATAGAGACAGACA  49

seq1  AGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCT  99

seq1  ATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAA  149

seq1  GACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAG  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GACAGCATTTTCAACATTTGGTGCTGGCACAACTGGTTGTTATCATGTAG  199

seq1  AAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTA  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTA  249

seq1  AGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAG  299

seq1  GAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCT  350
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCT  349

seq1  GAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGG  399

seq1  ACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAG  450
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCTTCAATAAG  449

seq1  ACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATC  499

seq1  AGATAGGGGACTAATATCCAACATATATA  529
      |||||||||||||||||||||||||||||
seq2  AGATAGGGGACTAATATCCAACATATATA  528

seq1: chr8_94504336_94505026
seq2: B6Ng01-053E13.g_70_760

seq1  GAATTCAGAACTATGGACATTCTCAGGCATCAGAGCTGTGCAGGCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTATGGACATTCTCAGGCATCAGAGCTGTGCAGGCAGAAA  50

seq1  AAAGTATCAAGTACATTTGCAGAGATCGAAATGTATTATGGTTACAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCAAGTACATTTGCAGAGATCGAAATGTATTATGGTTACAAAAT  100

seq1  CAGAATGAGGTACCAGAGCTTTAAAACTTAGTCTAAACTAAACAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGAGGTACCAGAGCTTTAAAACTTAGTCTAAACTAAACAAGAAAG  150

seq1  AGCTGTGTAAGTTCAGAGCAGAGTTGCAGACATGACAAATGCACCATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTAAGTTCAGAGCAGAGTTGCAGACATGACAAATGCACCATAAA  200

seq1  GATTGTTAGGTGTGTACATTTACACAATGGAGTACTACTCAGCTATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTAGGTGTGTACATTTACACAATGGAGTACTACTCAGCTATTAAA  250

seq1  AAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCAT  300

seq1  CATCTTGAGTGAGGTAACCCAATCACAAAAGAACTCACACAATATGTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGAGTGAGGTAACCCAATCACAAAAGAACTCACACAATATGTACT  350

seq1  CACTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATATAAG  400

seq1  ATACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGATTAAAGTGT  450
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATACAATTTGCAAAACTCATGAAACTCAAGAAGAACGAAGATTAAAGTGT  450

seq1  GGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAG  500

seq1  TTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGA  550
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TTACAGAGACAAAGTTTGGAGCTGATACGAAAGGATGGACCATCTATAGA  550

seq1  CTGCCATATCCGGGGATCCATCCCATAATCAGCTTCTAAACGCTGACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATATCCGGGGATCCATCCCATAATCAGCTTCTAAACGCTGACACC  600

seq1  ATTGCATACACTAGCAAGATTTTGCTGAAAGAACCCAGAGATAGCTGTCT  650
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  ATTGCATACACTATCAAGATTTTGCTGAAAGACCCCAGAGATAGCTGTCT  650

seq1  CTTGTGAGGCTATGTTGGGGCCTAGAAACACAGAAGTGGAT  691
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAGGCTATGTTGGGGCCTAGAAACACAGAAGTGGAT  691