BAC Information

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BAC

Clone NameB6Ng01-053G02
Chromosome2 (Build37)
Map Location 133,990,386 - 134,133,095
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043785, A430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053G02.bB6Ng01-053G02.g
ACCDH876445DH876446
length1,0051,103
definitionDH876445|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G02, 5' end.DH876446|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,132,095 - 134,133,095)(133,990,386 - 133,991,503)
sequence
gaattctctgttcaggtatctctactctctcagtggacttgcattttttc
tctatttttaaataaggaaaagtttgattcccaggttttagctctggaga
gtctgaccagcttcactaagatcaatttttgtatcaaagggagctgccat
ttttattgaataatgtctcagatattgatctacacatggagctggggtgt
gttcctcaaactaatgcagaactgcaaatgtctaggagaagtgcatgaat
ggtttctgactgtatcctggaattaggctttgcctgggtcggagctttaa
tctggttggagcccagtggataaagatgaaggcatccctatgctagtctc
taagttttaacacagttttttttttttccctgcagcacctggaagtatct
tggcagttttttcttctgtggaatgtttcctgacatccatttggaggtca
ctaagaatttgtatgtgaatggaagaaataattggcacatatggagaatg
gaaaagataagtagcagaaattcaagactattttccatttggaaagaaca
acttttgccatcaaatagatttggccacatatttctggttggttcctgct
gacttgtctttgtttatgttgaagaaaatatgggacgagttactcaatta
gctagaagaccactgagcacaggcctcagattttctattgtctataaata
tttatcatgcacaggcggtatttttaagaactggggaatacgactatcat
ccgaggtagtctgctgttacacttagaggattttgaaaggaacatgcacc
aggttcacagggatggatgactgcgaaggttgaccagaaactaacagagt
tgtaggcagcatgagatacttgagaggcttgctgcctgggaacaaaggat
ttggaaattgatagaagggcagtcaaaatgagctcggggaccttatcctc
taaagcaattgtgcgacttcctattgttgaaggctaaataacctattttg
tcttc
gaattcagtgctgatgtactctgaactactcttgtctccaaatacaaaac
tatcaacagtaatgaagaaatgatcatgagaaaattccaatgtacagcaa
caacacgtctccagagtatttgcaaaatgtccaacaaatctacaaagtct
acgtaaagcactagaaacagaaacttgaatcaggggatgcaaaagcatga
aatgaggaaatcatgttaattttgttgatgttggccacatttctttctaa
aatatcttcttatcattgtatcaccatgctgtgcatggggctgggaaccc
atcatggatgggaatcattagttcaaagggaatctgataccaagctaaaa
tgcaaccattggcacttctcactcagtagggattttagtttatgtataag
acccaacagaaattatcataacctactgtatcacactcacagggaatgtt
ttaggatgctgcaatgtgatttaaaaagcactcaagcatgcatgtctgta
tttaattgtatgttgacaagtaaatatagtctttggttggggtcctcatg
gtacaaaggagggaccaagaccctgaaaacataacttgccaaagaagttc
aagtgcaaatgagctttctttgcgtcttggaaattgctatgccatctttc
tcctgaagccacttttgcaaccagctaacctggtcactgtcttcttagtc
acctaacagggtcccacaacactcttccttgtatttgggcctttctttca
caaataaccatggttttgccctctggcttgcaacctatatatgagtttgt
aatagctatattccatgttgttattgtctgtctttgtttgcttgcttgtt
taccctggattaaatatgattaaaaaaacagtagtgaaatttcagtattc
taatactgttcaattaaagactttggtaataatgtttaactctgtaaaat
gtgatgactagaataaaagggaaagaaggtgctaatactctgtcaccctg
tgccttcaaacttcaggtttcctaagggactgtaacaatgctacccggta
taaatagagtcatatttaatgtgatttaaaaaaatttggatctaagaatt
tgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134132095_134133095
seq2: B6Ng01-053G02.b_46_1050 (reverse)

seq1  GAAGACAAAATAGGTTATATATGCCTTCAACAATAGGAAGTCGCAACAAT  50
      |||||||||||||||||| || |||||||||||||||||||||| |||||
seq2  GAAGACAAAATAGGTTATTTA-GCCTTCAACAATAGGAAGTCGC-ACAAT  48

seq1  CTGCTCTAGAGGA-AAGGTCACCGAGCTCATTTTGACTGCCCTTCTATCA  99
       |||| ||||||| |||||| |||||||||||||||||||||||||||||
seq2  -TGCTTTAGAGGATAAGGTCCCCGAGCTCATTTTGACTGCCCTTCTATCA  97

seq1  ATTTCCAAATCCTTTGTTCCCA-GCAGCAAGCCTCTCAAGTATCTCATGC  148
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTTCCAAATCCTTTGTTCCCAGGCAGCAAGCCTCTCAAGTATCTCATGC  147

seq1  TGCCTACAACTCTG-TAGTTTCTGGTCAA-CTTCGCAGTCATCCATCCCT  196
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  TGCCTACAACTCTGTTAGTTTCTGGTCAACCTTCGCAGTCATCCATCCCT  197

seq1  GTGAACCTGGTGCATGTTCCTTTC-AAATCCTCTAAGTGTAACAGCAGAC  245
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGAACCTGGTGCATGTTCCTTTCAAAATCCTCTAAGTGTAACAGCAGAC  247

seq1  TACCTCGGATGATAGTCGTATTCCCCAGTTCTT-AAAATACCGCCTGTGC  294
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACCTCGGATGATAGTCGTATTCCCCAGTTCTTAAAAATACCGCCTGTGC  297

seq1  ATGATAAATATTTATAGACAATAG-AAATCTGAGGCCTGTGCTCAGTGGT  343
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGATAAATATTTATAGACAATAGAAAATCTGAGGCCTGTGCTCAGTGGT  347

seq1  CTTCTAGCTAATTGAGTAACTCGTCCCATATTTTCTTCAACATAAACAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGCTAATTGAGTAACTCGTCCCATATTTTCTTCAACATAAACAAA  397

seq1  GACAAGTCAGCAGGAACCAACCAGAAATATGTGGCCAAATCTATTTGATG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTCAGCAGGAACCAACCAGAAATATGTGGCCAAATCTATTTGATG  447

seq1  GCAAAAGTTGTTCTTTCCAAATGGAAAATAGTCTTGAATTTCTGCTACTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGTTGTTCTTTCCAAATGGAAAATAGTCTTGAATTTCTGCTACTT  497

seq1  ATCTTTTCCATTCTCCATATGTGCCAATTATTTCTTCCATTCACATACAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCCATTCTCCATATGTGCCAATTATTTCTTCCATTCACATACAA  547

seq1  ATTCTTAGTGACCTCCAAATGGATGTCAGGAAACATTCCACAGAAGAAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGTGACCTCCAAATGGATGTCAGGAAACATTCCACAGAAGAAAA  597

seq1  AACTGCCAAGATACTTCCAGGTGCTGCAGGGAAAAAAAAAAAACTGTGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCAAGATACTTCCAGGTGCTGCAGGGAAAAAAAAAAAACTGTGTT  647

seq1  AAAACTTAGAGACTAGCATAGGGATGCCTTCATCTTTATCCACTGGGCTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTAGAGACTAGCATAGGGATGCCTTCATCTTTATCCACTGGGCTC  697

seq1  CAACCAGATTAAAGCTCCGACCCAGGCAAAGCCTAATTCCAGGATACAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGATTAAAGCTCCGACCCAGGCAAAGCCTAATTCCAGGATACAGT  747

seq1  CAGAAACCATTCATGCACTTCTCCTAGACATTTGCAGTTCTGCATTAGTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCATTCATGCACTTCTCCTAGACATTTGCAGTTCTGCATTAGTT  797

seq1  TGAGGAACACACCCCAGCTCCATGTGTAGATCAATATCTGAGACATTATT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAACACACCCCAGCTCCATGTGTAGATCAATATCTGAGACATTATT  847

seq1  CAATAAAAATGGCAGCTCCCTTTGATACAAAAATTGATCTTAGTGAAGCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAATGGCAGCTCCCTTTGATACAAAAATTGATCTTAGTGAAGCT  897

seq1  GGTCAGACTCTCCAGAGCTAAAACCTGGGAATCAAACTTTTCCTTATTTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGACTCTCCAGAGCTAAAACCTGGGAATCAAACTTTTCCTTATTTA  947

seq1  AAAATAGAGAAAAAATGCAAGTCCACTGAGAGAGTAGAGATACCTGAACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAGAAAAAATGCAAGTCCACTGAGAGAGTAGAGATACCTGAACA  997

seq1  GAGAATTC  1001
      ||||||||
seq2  GAGAATTC  1005

seq1: chr2_133990386_133991503
seq2: B6Ng01-053G02.g_68_1170

seq1  GAATTCAGTGCTGATGTACTCTGAACTACTCTTGTCTCCAAATACAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCTGATGTACTCTGAACTACTCTTGTCTCCAAATACAAAAC  50

seq1  TATCAACAGTAATGAAGAAATGATCATGAGAAAATTCCAATGTACAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACAGTAATGAAGAAATGATCATGAGAAAATTCCAATGTACAGCAA  100

seq1  CAACACGTCTCCAGAGTATTTGCAAAATGTCCAACAAATCTACAAAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACGTCTCCAGAGTATTTGCAAAATGTCCAACAAATCTACAAAGTCT  150

seq1  ACGTAAAGCACTAGAAACAGAAACTTGAATCAGGGGATGCAAAAGCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAAGCACTAGAAACAGAAACTTGAATCAGGGGATGCAAAAGCATGA  200

seq1  AATGAGGAAATCATGTTAATTTTGTTGATGTTGGCCACATTTCTTTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAAATCATGTTAATTTTGTTGATGTTGGCCACATTTCTTTCTAA  250

seq1  AATATCTTCTTATCATTGTATCACCATGCTGTGCATGGGGCTGGGAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTCTTATCATTGTATCACCATGCTGTGCATGGGGCTGGGAACCC  300

seq1  ATCATGGATGGGAATCATTAGTTCAAAGGGAATCTGATACCAAGCTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGATGGGAATCATTAGTTCAAAGGGAATCTGATACCAAGCTAAAA  350

seq1  TGCAACCATTGGCACTTCTCACTCAGTAGGGATTTTAGTTTATGTATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCATTGGCACTTCTCACTCAGTAGGGATTTTAGTTTATGTATAAG  400

seq1  ACCCAACAGAAATTATCATAACCTACTGTATCACACTCACAGGGAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAGAAATTATCATAACCTACTGTATCACACTCACAGGGAATGTT  450

seq1  TTAGGATGCTGCAATGTGATTTAAAAAGCACTCAAGCATGCATGTCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGCTGCAATGTGATTTAAAAAGCACTCAAGCATGCATGTCTGTA  500

seq1  TTTAATTGTATGTTGACAAGTAAATATAGTCTTTGGTTGGGGTCCTCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGTATGTTGACAAGTAAATATAGTCTTTGGTTGGGGTCCTCATG  550

seq1  GTACAAAGGAGGGACCAAGACCCTGAAAACATAACTTGCCAAAGAAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGGAGGGACCAAGACCCTGAAAACATAACTTGCCAAAGAAGTTC  600

seq1  AAGTGCAAATGAGCTTTCTTTGCGTCTTGGAAATTGCTATGCCATCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCAAATGAGCTTTCTTTGCGTCTTGGAAATTGCTATGCCATCTTTC  650

seq1  TCCTGAAGCCACTTTTGCAACCAGCTAACCTGGTCACTGTCTTCTTAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGCCACTTTTGCAACCAGCTAACCTGGTCACTGTCTTCTTAGTC  700

seq1  ACCTAACAGGGTCCCACAACACTCTTCCTTGTATTTGGGCCTTTCTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACAGGGTCCCACAACACTCTTCCTTGTATTTGGGCCTTTCTTTCA  750

seq1  CAAATAACCATGGTTTTGCCCTCTGGCTTGCAACCTATATATGAGTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACCATGGTTTTGCCCTCTGGCTTGCAACCTATATATGAGTTTGT  800

seq1  AATAGCTATATTCCATGTTGTTATTGTCTGTCCTTTGTTTGCTTGCTTGT  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATAGCTATATTCCATGTTGTTATTGTCTGT-CTTTGTTTGCTTGCTTGT  849

seq1  TTACCCTGGATTAAATTATGATTAAAAAAACAGTAGTGAAATTCCAGTAT  900
      ||||||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  TTACCCTGGATTAAA-TATGATTAAAAAAACAGTAGTGAAATTTCAGTAT  898

seq1  TCTAAATACTGTTCAATTAAAGACTTTGGTATTAATGTTTAACTCTGTAA  950
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCT-AATACTGTTCAATTAAAGACTTTGGTAATAATGTTTAACTCTGTAA  947

seq1  AATGTTGATGACTAGAATAAAAGGGAAAGAAGGTGCTAATACTCTGTCAC  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATG-TGATGACTAGAATAAAAGGGAAAGAAGGTGCTAATACTCTGTCAC  996

seq1  CCTGTGCCTTCTAGACTTCAGGGTTCCCTAAAGGGACTGTAGACAATGCT  1050
      ||||||||||| | |||||||| ||||   ||||||||||| ||||||||
seq2  CCTGTGCCTTC-AAACTTCAGGTTTCC--TAAGGGACTGTA-ACAATGCT  1042

seq1  ACCCTGTATTAAAATAGAGTCATATTTAATGTGTATTTTAAAAAAATTTT  1100
      |||| ||||  ||||||||||||||||||||||   ||||||||||||| 
seq2  ACCCGGTAT--AAATAGAGTCATATTTAATGTG--ATTTAAAAAAATTTG  1088

seq1  GATTCATAAAGAATTTGG  1118
      |||     ||||||||||
seq2  GAT---CTAAGAATTTGG  1103