BAC Information

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BAC

Clone NameB6Ng01-053G05
Chromosome2 (Build37)
Map Location 108,404,888 - 108,405,752
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078
Downstream geneLOC668790, LOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053G05.bB6Ng01-053G05.g
ACCDH876451DH876452
length234865
definitionDH876451|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G05, 5' end.DH876452|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acattggtacaaggtaaaactcagacccaaaattacatgcatgttatgta
ctcactgataagtgggtattagccaaaattacagaatacccataatacaa
cctacagaccataagaagatgtttaacaagatggaaggcccaacagcaga
tgcttcaatctcacttagaagggggaacaaaataatcacagaaggcagag
ggatggaggaaaggagggagggggacgggggagg
gaattcttttcaatgaaaatttcctaacataataaaaaaaaaaaactata
ttttgactttgtttaatgtctgactcggtttatataatggttagttttaa
atgtaagcttgacttagcctagagacagctgttaaggattctcaataagc
aattttgtagttcaggcaacctgtggacacatctgtgatttttgcttgct
tgcttgtttgtattgtttttgttctcattttgttttttgttttttgtttt
tgttttttgttttttgttttttttttgttgttgttgttgtttcaattatg
tggcttaaggtatgaagacttaccaactgtgaatatcactgtcatttggg
tagggggtcctggactctgcaagagcggagaatgtggcctgagcattaaa
acttaagcactctgctcttgactctaggtgtaatagaatgagctactttg
catatttgctcctttgagttcatctcagtgatggactgtaacctagattg
tggaaaaaagtaaacctttgtcgcttaagtaatttttgtcagaataattt
atcacagcatcaggttgaaactaagacaacgtaattttttctaagagtaa
gtttttgatatacttatctcttctaagatcttctatttttctctgatgat
tttgattttgtcaggccaatctttttccttcttaccatgtttttgttttt
ggatttttttcctaaataatgaacttttaaaaaacgctgttttatatttt
ttagctaacatttcctgtagattatgtttaagagactttaattttttcct
tttcaccctcacatcttacattttttgtcaagacattaaatttcttcata
ataactgctgatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108404888_108405752
seq2: B6Ng01-053G05.g_69_933 (reverse)

seq1  TATATCAGCAGTTATTATGAAGAAATTTAATGTCTTGACAAAAAATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGCAGTTATTATGAAGAAATTTAATGTCTTGACAAAAAATGTAA  50

seq1  GATGTGAGGGTTGAAAAGGAAAAAATTAAAGTCTCTTAAACATAATCTAC  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAGGG-TGAAAAGGAAAAAATTAAAGTCTCTTAAACATAATCTAC  99

seq1  AGGAAATGTTAGCTAAAAAATATAAAACAGCGTTTTTTAAAAGTTCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGTTAGCTAAAAAATATAAAACAGCGTTTTTTAAAAGTTCATTA  149

seq1  TTTAGG-AAAAAATCCAAAAACAAAAACATGGTAAGAAGGAAAAAGATTG  199
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAAAAAAATCCAAAAACAAAAACATGGTAAGAAGGAAAAAGATTG  199

seq1  GCCTGACAAAATCAAAATCATCAGAGAAAAATAGAAGATCTTAGAAGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACAAAATCAAAATCATCAGAGAAAAATAGAAGATCTTAGAAGAGA  249

seq1  TAAGTATATCAAAAACTTACTCTTAGAAAAAATTACGTTGTCTTAGTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATATCAAAAACTTACTCTTAGAAAAAATTACGTTGTCTTAGTTTC  299

seq1  AACCTGATGCTGTGATAAATTATTCTGACAAAAATTACTTAAGCGACAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATGCTGTGATAAATTATTCTGACAAAAATTACTTAAGCGACAAA  349

seq1  GGTTTACTTTTTTCCACAATCTAGGTTACAGTCCATCACTGAGATGAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACTTTTTTCCACAATCTAGGTTACAGTCCATCACTGAGATGAACT  399

seq1  CAAAGGAGCAAATATGCAAAGTAGCTCATTCTATTACACCTAGAGTCAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGCAAATATGCAAAGTAGCTCATTCTATTACACCTAGAGTCAAG  449

seq1  AGCAGAGTGCTTAAGTTTTAATGCTCAGGCCACATTCTCCGCTCTTGCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTGCTTAAGTTTTAATGCTCAGGCCACATTCTCCGCTCTTGCAG  499

seq1  AGTCCAGGACCCCCTACCCAAATGACAGTGATATTCACAGTTGGTAAGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGGACCCCCTACCCAAATGACAGTGATATTCACAGTTGGTAAGTC  549

seq1  TTCATACCTTAAGCCACATAATTGAAACAACAACAACAACAAAAAAAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACCTTAAGCCACATAATTGAAACAACAACAACAACAAAAAAAAAA  599

seq1  CAAAAAACAAAAAACAAAAACAAAAAACAAAAAACAAAATGAGAACAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAAAAAACAAAAACAAAAAACAAAAAACAAAATGAGAACAAAA  649

seq1  ACAATACAAACAAGCAAGCAAGCAAAAATCACAGATGTGTCCACAGGTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACAAACAAGCAAGCAAGCAAAAATCACAGATGTGTCCACAGGTTG  699

seq1  CCTGAACTACAAAATTGCTTATTGAGAATCCTTAACAGCTGTCTCTAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACTACAAAATTGCTTATTGAGAATCCTTAACAGCTGTCTCTAGGC  749

seq1  TAAGTCAAGCTTACATTTAAAACTAACCATTATATAAACCGAGTCAGACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAAGCTTACATTTAAAACTAACCATTATATAAACCGAGTCAGACA  799

seq1  TTAAACAAAGTCAAAATATAGTTTTTTTTTTTTATTATGTTAGGAAATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAAGTCAAAATATAGTTTTTTTTTTTTATTATGTTAGGAAATTT  849

seq1  TCATTGAAAAGAATTC  865
      ||||||||||||||||
seq2  TCATTGAAAAGAATTC  865